RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 H3BRN7 92 aa9.9□□□□□ -0.83
SHMT2-229ENST00000557348 CIDEAO60543 219 aa9.9□□□□□ -0.83
SHMT2-229ENST00000557348 NBEAP1P0C6P0 100 aa9.9□□□□□ -0.83
SHMT2-229ENST00000557348 HIST1H1EP10412 219 aaKnown RBP9.9□□□□□ -0.83
SHMT2-229ENST00000557348 GP9P14770 177 aa9.9□□□□□ -0.83
SHMT2-229ENST00000557348 HINT1P49773 126 aaPredicted RBP9.9□□□□□ -0.83
SHMT2-229ENST00000557348 SEC11AP67812 179 aa9.9□□□□□ -0.83
SHMT2-229ENST00000557348 OCIAD2Q56VL3 154 aa9.9□□□□□ -0.83
SHMT2-229ENST00000557348 MORN5Q5VZ52 161 aa9.9□□□□□ -0.83
SHMT2-229ENST00000557348 NHLRC2Q8NBF2 726 aa9.9□□□□□ -0.83
SHMT2-229ENST00000557348 PIFOQ8TCI5 191 aa9.9□□□□□ -0.83
SHMT2-229ENST00000557348 EEF1AKMT3Q96AZ1 226 aa9.9□□□□□ -0.83
SHMT2-229ENST00000557348 IGF2BP2-AS1Q96M15 143 aa9.9□□□□□ -0.83
SHMT2-229ENST00000557348 CST9LQ9H4G1 147 aa9.9□□□□□ -0.83
SHMT2-229ENST00000557348 PEF1Q9UBV8 284 aaKnown RBP9.9□□□□□ -0.83
SHMT2-229ENST00000557348 UTP20O75691 2785 aaKnown RBP9.89□□□□□ -0.83
SHMT2-229ENST00000557348 IGHV3OR16-10A0A075B7F0 116 aa9.89□□□□□ -0.83
SHMT2-229ENST00000557348 TRAV41A0A0B4J266 112 aa9.89□□□□□ -0.83
SHMT2-229ENST00000557348 C2orf70A6NJV1 201 aa9.89□□□□□ -0.83
SHMT2-229ENST00000557348 M0R2Z0 102 aa9.89□□□□□ -0.83
SHMT2-229ENST00000557348 IGF1P05019 195 aa9.89□□□□□ -0.83
SHMT2-229ENST00000557348 IL4P05112 153 aa9.89□□□□□ -0.83
SHMT2-229ENST00000557348 KLF17Q5JT82 389 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-229ENST00000557348 Q5PR19 223 aa9.89□□□□□ -0.83
SHMT2-229ENST00000557348 SLC25A34Q6PIV7 304 aa9.89□□□□□ -0.83
SHMT2-229ENST00000557348 LYPD1Q8N2G4 141 aa9.89□□□□□ -0.83
SHMT2-229ENST00000557348 ZNF491Q8N8L2 437 aa9.89□□□□□ -0.83
SHMT2-229ENST00000557348 CSTL1Q9H114 145 aa9.89□□□□□ -0.83
SHMT2-229ENST00000557348 AKAP6Q13023 2319 aa9.88□□□□□ -0.83
SHMT2-229ENST00000557348 F2Z2F3 143 aa9.88□□□□□ -0.83
SHMT2-229ENST00000557348 H3BUX3 64 aa9.88□□□□□ -0.83
SHMT2-229ENST00000557348 TGFAP01135 160 aa9.88□□□□□ -0.83
SHMT2-229ENST00000557348 PYYP10082 97 aa9.88□□□□□ -0.83
SHMT2-229ENST00000557348 HIST1H1AQ02539 215 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-229ENST00000557348 C15orf32Q32M92 178 aa9.88□□□□□ -0.83
SHMT2-229ENST00000557348 PRR27Q6MZM9 219 aa9.88□□□□□ -0.83
SHMT2-229ENST00000557348 C5orf17Q8NAS9 161 aa9.88□□□□□ -0.83
SHMT2-229ENST00000557348 ZNF502Q8TBZ5 544 aa9.88□□□□□ -0.83
SHMT2-229ENST00000557348 RCHY1Q96PM5 261 aa9.88□□□□□ -0.83
SHMT2-229ENST00000557348 WNK2Q9Y3S1 2297 aa9.88□□□□□ -0.83
SHMT2-229ENST00000557348 IGHG2P01859 326 aa9.87□□□□□ -0.83
SHMT2-229ENST00000557348 IGLL1P15814 213 aa9.87□□□□□ -0.83
SHMT2-229ENST00000557348 MYCNOSP40205 109 aa9.87□□□□□ -0.83
SHMT2-229ENST00000557348 PDE6HQ13956 83 aa9.87□□□□□ -0.83
SHMT2-229ENST00000557348 C9orf139Q6ZV77 190 aa9.87□□□□□ -0.83
SHMT2-229ENST00000557348 ZNF329Q86UD4 541 aa9.87□□□□□ -0.83
SHMT2-229ENST00000557348 VPS25Q9BRG1 176 aa9.87□□□□□ -0.83
SHMT2-229ENST00000557348 GFRA4Q9GZZ7 299 aa9.87□□□□□ -0.83
SHMT2-229ENST00000557348 OTORQ9NRC9 128 aa9.87□□□□□ -0.83
SHMT2-229ENST00000557348 RNF114Q9Y508 228 aa9.87□□□□□ -0.83
SHMT2-229ENST00000557348 LRBAP50851 2863 aa9.87□□□□□ -0.83
SHMT2-229ENST00000557348 F8W735 103 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-229ENST00000557348 PEX7O00628 323 aa9.87□□□□□ -0.83
SHMT2-229ENST00000557348 PLXNB1O43157 2135 aa9.87□□□□□ -0.83
SHMT2-229ENST00000557348 IGLV2-8P01709 118 aa9.87□□□□□ -0.83
SHMT2-229ENST00000557348 RPL7P18124 248 aaKnown RBP9.87□□□□□ -0.83
SHMT2-229ENST00000557348 C19orf54Q5BKX5 351 aa9.87□□□□□ -0.83
SHMT2-229ENST00000557348 GTF2H5Q6ZYL4 71 aa9.87□□□□□ -0.83
SHMT2-229ENST00000557348 TMEM219Q86XT9 240 aa9.87□□□□□ -0.83
SHMT2-229ENST00000557348 RNF223E7ERA6 249 aa9.86□□□□□ -0.83
SHMT2-229ENST00000557348 TAX1BP3O14907 124 aa9.86□□□□□ -0.83
SHMT2-229ENST00000557348 SLC25A5P05141 298 aaKnown RBP9.86□□□□□ -0.83
SHMT2-229ENST00000557348 CTSGP08311 255 aa9.86□□□□□ -0.83
SHMT2-229ENST00000557348 IGHV4-31P0DP07 118 aa9.86□□□□□ -0.83
SHMT2-229ENST00000557348 ATP5G2Q06055 141 aa9.86□□□□□ -0.83
SHMT2-229ENST00000557348 BVES-AS1Q5T3Y7 98 aa9.86□□□□□ -0.83
SHMT2-229ENST00000557348 SPATA12Q7Z6I5 190 aa9.86□□□□□ -0.83
SHMT2-229ENST00000557348 USMG5Q96IX5 58 aa9.86□□□□□ -0.83
SHMT2-229ENST00000557348 GPR82Q96P67 336 aa9.86□□□□□ -0.83
SHMT2-229ENST00000557348 RABAC1Q9UI14 185 aa9.86□□□□□ -0.83
SHMT2-229ENST00000557348 HSPB8Q9UJY1 196 aa9.86□□□□□ -0.83
SHMT2-229ENST00000557348 EPDR1Q9UM22 224 aa9.86□□□□□ -0.83
SHMT2-229ENST00000557348 OR2T8A6NH00 312 aa9.85□□□□□ -0.83
SHMT2-229ENST00000557348 FSHBP01225 129 aa9.85□□□□□ -0.83
SHMT2-229ENST00000557348 NTF3P20783 257 aa9.85□□□□□ -0.83
SHMT2-229ENST00000557348 FMC1Q96HJ9 113 aa9.85□□□□□ -0.83
SHMT2-229ENST00000557348 ABCA2Q9BZC7 2435 aa9.85□□□□□ -0.83
SHMT2-229ENST00000557348 SERTM2A0A1B0GWG4 89 aa9.84□□□□□ -0.83
SHMT2-229ENST00000557348 A0A1B0GXF2 115 aa9.84□□□□□ -0.83
SHMT2-229ENST00000557348 OR4C46A6NHA9 309 aa9.84□□□□□ -0.83
SHMT2-229ENST00000557348 SMIM17P0DL12 118 aa9.84□□□□□ -0.83
SHMT2-229ENST00000557348 COL8A1P27658 744 aa9.84□□□□□ -0.83
SHMT2-229ENST00000557348 KRTAP10-9P60411 292 aa9.84□□□□□ -0.83
SHMT2-229ENST00000557348 EBLN2Q6P2I7 272 aa9.84□□□□□ -0.83
SHMT2-229ENST00000557348 BLNKQ8WV28 456 aa9.84□□□□□ -0.83
SHMT2-229ENST00000557348 NDFIP1Q9BT67 221 aa9.84□□□□□ -0.83
SHMT2-229ENST00000557348 Q9H3A6 140 aa9.84□□□□□ -0.83
SHMT2-229ENST00000557348 KLF12Q9Y4X4 402 aa9.84□□□□□ -0.83
SHMT2-229ENST00000557348 TRBV19A0A075B6N1 114 aa9.83□□□□□ -0.84
SHMT2-229ENST00000557348 PGPA6NDG6 321 aa9.83□□□□□ -0.84
SHMT2-229ENST00000557348 G3V318 75 aa9.83□□□□□ -0.84
SHMT2-229ENST00000557348 SYS1-DBNDD2H3BUS1 97 aa9.83□□□□□ -0.84
SHMT2-229ENST00000557348 K7EQM0 130 aa9.83□□□□□ -0.84
SHMT2-229ENST00000557348 AVPP01185 164 aa9.83□□□□□ -0.84
SHMT2-229ENST00000557348 SCGB1A1P11684 91 aa9.83□□□□□ -0.84
SHMT2-229ENST00000557348 PSG9Q00887 426 aa9.83□□□□□ -0.84
SHMT2-229ENST00000557348 LY6EQ16553 131 aa9.83□□□□□ -0.84
SHMT2-229ENST00000557348 HIST2H2BCQ6DN03 193 aa9.83□□□□□ -0.84
SHMT2-229ENST00000557348 MAP1LC3CQ9BXW4 147 aa9.83□□□□□ -0.84
SHMT2-229ENST00000557348 ZNF492Q9P255 531 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms