RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 NDUFAF3Q9BU61 184 aa14.98□□□□□ -0.01
FOXN3-214ENST00000557258 ANKRD17O75179 2603 aaKnown RBP14.97□□□□□ -0.01
FOXN3-214ENST00000557258 K7EQM0 130 aa14.97□□□□□ -0.01
FOXN3-214ENST00000557258 CHEK1O14757 476 aa14.97□□□□□ -0.01
FOXN3-214ENST00000557258 CSN3P07498 182 aa14.97□□□□□ -0.01
FOXN3-214ENST00000557258 Q8N976 141 aa14.97□□□□□ -0.01
FOXN3-214ENST00000557258 TMEM75Q8N9X5 138 aa14.97□□□□□ -0.01
FOXN3-214ENST00000557258 CCDC140Q96MF4 163 aa14.97□□□□□ -0.01
FOXN3-214ENST00000557258 CLEC5AQ9NY25 188 aa14.97□□□□□ -0.01
FOXN3-214ENST00000557258 ZNF705AQ6ZN79 300 aaPredicted RBP14.97□□□□□ -0.01
FOXN3-214ENST00000557258 URB1-AS1Q96HZ7 61 aa14.96□□□□□ -0.01
FOXN3-214ENST00000557258 IGHV4-30-2A0A087WSY4 118 aa14.96□□□□□ -0.02
FOXN3-214ENST00000557258 M0R2Z0 102 aa14.96□□□□□ -0.02
FOXN3-214ENST00000557258 ATP5J2P56134 94 aa14.96□□□□□ -0.02
FOXN3-214ENST00000557258 ZNF502Q8TBZ5 544 aa14.96□□□□□ -0.02
FOXN3-214ENST00000557258 VAMP8Q9BV40 100 aa14.96□□□□□ -0.02
FOXN3-214ENST00000557258 NPIPB6E9PJ23 425 aa14.95□□□□□ -0.02
FOXN3-214ENST00000557258 ERCC8Q13216 396 aa14.95□□□□□ -0.02
FOXN3-214ENST00000557258 RASL11AQ6T310 242 aa14.95□□□□□ -0.02
FOXN3-214ENST00000557258 ATP5L2Q7Z4Y8 100 aa14.95□□□□□ -0.02
FOXN3-214ENST00000557258 FAM110DQ8TAY7 271 aaPredicted RBP14.95□□□□□ -0.02
FOXN3-214ENST00000557258 LCNL1Q6ZST4 164 aa14.95□□□□□ -0.02
FOXN3-214ENST00000557258 C5orf56Q8N8D9 126 aa14.95□□□□□ -0.02
FOXN3-214ENST00000557258 PRAC2D3DTV9 90 aa14.94□□□□□ -0.02
FOXN3-214ENST00000557258 RPL7P18124 248 aaKnown RBP14.94□□□□□ -0.02
FOXN3-214ENST00000557258 CSN1S1P47710 185 aa14.94□□□□□ -0.02
FOXN3-214ENST00000557258 RELQ04864 619 aaPredicted RBP14.94□□□□□ -0.02
FOXN3-214ENST00000557258 TEX43Q6ZNM6 134 aa14.94□□□□□ -0.02
FOXN3-214ENST00000557258 BORCS7Q96B45 105 aa14.94□□□□□ -0.02
FOXN3-214ENST00000557258 KIR2DL5BA0A0G2JN68 375 aa14.93□□□□□ -0.02
FOXN3-214ENST00000557258 KIR2DL5BA0A0G2JPC4 375 aa14.93□□□□□ -0.02
FOXN3-214ENST00000557258 IGHG4P01861 327 aa14.93□□□□□ -0.02
FOXN3-214ENST00000557258 CT83Q5H943 113 aa14.93□□□□□ -0.02
FOXN3-214ENST00000557258 LINC00173Q6ZV60 143 aa14.93□□□□□ -0.02
FOXN3-214ENST00000557258 KIR2DL5AQ8N109 375 aa14.93□□□□□ -0.02
FOXN3-214ENST00000557258 RNF24Q9Y225 148 aa14.93□□□□□ -0.02
FOXN3-214ENST00000557258 DOPEY2Q9Y3R5 2298 aa14.93□□□□□ -0.02
FOXN3-214ENST00000557258 MXRA5Q9NR99 2828 aa14.93□□□□□ -0.02
FOXN3-214ENST00000557258 CT45A10P0DMU9 189 aa14.93□□□□□ -0.02
FOXN3-214ENST00000557258 ZNF80P51504 273 aaPredicted RBP14.93□□□□□ -0.02
FOXN3-214ENST00000557258 ZNF48Q96MX3 618 aaPredicted RBP14.93□□□□□ -0.02
FOXN3-214ENST00000557258 ZFP30Q9Y2G7 519 aa14.93□□□□□ -0.02
FOXN3-214ENST00000557258 EBLN2Q6P2I7 272 aa14.92□□□□□ -0.02
FOXN3-214ENST00000557258 LYPD1Q8N2G4 141 aa14.92□□□□□ -0.02
FOXN3-214ENST00000557258 PIMREGQ9BSJ6 248 aa14.92□□□□□ -0.02
FOXN3-214ENST00000557258 MCRIP2Q9BUT9 160 aaKnown RBP14.92□□□□□ -0.02
FOXN3-214ENST00000557258 H0Y8G0 127 aa14.92□□□□□ -0.02
FOXN3-214ENST00000557258 MAPK1IP1LQ8NDC0 245 aa14.92□□□□□ -0.02
FOXN3-214ENST00000557258 PIFOQ8TCI5 191 aa14.92□□□□□ -0.02
FOXN3-214ENST00000557258 TMEM213A2RRL7 107 aa14.91□□□□□ -0.02
FOXN3-214ENST00000557258 SH2D1AO60880 128 aa14.91□□□□□ -0.02
FOXN3-214ENST00000557258 SPATA12Q7Z6I5 190 aa14.91□□□□□ -0.02
FOXN3-214ENST00000557258 SNHG12Q9BXW3 62 aa14.91□□□□□ -0.02
FOXN3-214ENST00000557258 ZFAND3Q9H8U3 227 aa14.91□□□□□ -0.02
FOXN3-214ENST00000557258 A0A1B0GUT8 65 aa14.91□□□□□ -0.02
FOXN3-214ENST00000557258 FAM181BA6NEQ2 426 aa14.91□□□□□ -0.02
FOXN3-214ENST00000557258 TRBV12-3P01733 135 aa14.91□□□□□ -0.02
FOXN3-214ENST00000557258 Q6ZS46 218 aa14.91□□□□□ -0.02
FOXN3-214ENST00000557258 LOC102724200A0A096LPH7 203 aaPredicted RBP14.9□□□□□ -0.02
FOXN3-214ENST00000557258 IGHV1-69DA0A0B4J2H0 117 aa14.9□□□□□ -0.02
FOXN3-214ENST00000557258 SERTM2A0A1B0GWG4 89 aa14.9□□□□□ -0.02
FOXN3-214ENST00000557258 CLPSL1A2RUU4 121 aa14.9□□□□□ -0.02
FOXN3-214ENST00000557258 IGHV1-69P01742 117 aa14.9□□□□□ -0.02
FOXN3-214ENST00000557258 PAX8Q06710 450 aa14.9□□□□□ -0.02
FOXN3-214ENST00000557258 PDE6HQ13956 83 aa14.9□□□□□ -0.02
FOXN3-214ENST00000557258 GFRA4Q9GZZ7 299 aa14.9□□□□□ -0.02
FOXN3-214ENST00000557258 IGHV3-11P01762 117 aa14.9□□□□□ -0.02
FOXN3-214ENST00000557258 TLN2Q9Y4G6 2542 aa14.9□□□□□ -0.02
FOXN3-214ENST00000557258 PSG9Q00887 426 aa14.89□□□□□ -0.03
FOXN3-214ENST00000557258 KLF5Q13887 457 aaPredicted RBP14.89□□□□□ -0.03
FOXN3-214ENST00000557258 BATFQ16520 125 aa14.89□□□□□ -0.03
FOXN3-214ENST00000557258 LYZL1Q6UWQ5 148 aa14.89□□□□□ -0.03
FOXN3-214ENST00000557258 BUB3O43684 328 aa14.89□□□□□ -0.03
FOXN3-214ENST00000557258 C10orf105Q8TEF2 133 aa14.89□□□□□ -0.03
FOXN3-214ENST00000557258 PRR25Q96S07 402 aa14.89□□□□□ -0.03
FOXN3-214ENST00000557258 SPATA45Q537H7 98 aa14.89□□□□□ -0.03
FOXN3-214ENST00000557258 CLEC2AQ6UVW9 174 aa14.89□□□□□ -0.03
FOXN3-214ENST00000557258 OR4B1Q8NGF8 309 aa14.89□□□□□ -0.03
FOXN3-214ENST00000557258 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.88□□□□□ -0.03
FOXN3-214ENST00000557258 H3BUX3 64 aa14.88□□□□□ -0.03
FOXN3-214ENST00000557258 PPIFP30405 207 aaKnown RBP14.88□□□□□ -0.03
FOXN3-214ENST00000557258 BLCAPP62952 87 aa14.88□□□□□ -0.03
FOXN3-214ENST00000557258 C16orf54Q6UWD8 224 aa14.88□□□□□ -0.03
FOXN3-214ENST00000557258 S100A7AQ86SG5 101 aa14.88□□□□□ -0.03
FOXN3-214ENST00000557258 TP73-AS1Q9UF72 201 aa14.88□□□□□ -0.03
FOXN3-214ENST00000557258 TRAV41A0A0B4J266 112 aa14.88□□□□□ -0.03
FOXN3-214ENST00000557258 TMEM189A5PLL7 270 aa14.88□□□□□ -0.03
FOXN3-214ENST00000557258 IGHV1-24A0A0C4DH33 117 aa14.87□□□□□ -0.03
FOXN3-214ENST00000557258 HAX1O00165 279 aa14.87□□□□□ -0.03
FOXN3-214ENST00000557258 SCGB2A1O75556 95 aa14.87□□□□□ -0.03
FOXN3-214ENST00000557258 AVPP01185 164 aa14.87□□□□□ -0.03
FOXN3-214ENST00000557258 TRGV3P03979 118 aa14.87□□□□□ -0.03
FOXN3-214ENST00000557258 Q6ZQT7 251 aa14.87□□□□□ -0.03
FOXN3-214ENST00000557258 MOB4Q9Y3A3 225 aa14.87□□□□□ -0.03
FOXN3-214ENST00000557258 NAV2Q8IVL1 2488 aa14.87□□□□□ -0.03
FOXN3-214ENST00000557258 A1L4Q6 167 aa14.87□□□□□ -0.03
FOXN3-214ENST00000557258 GOSR1O95249 250 aa14.87□□□□□ -0.03
FOXN3-214ENST00000557258 FAM162BQ5T6X4 162 aa14.87□□□□□ -0.03
FOXN3-214ENST00000557258 IGKV3-7A0A075B6H7 116 aa14.86□□□□□ -0.03
FOXN3-214ENST00000557258 LOC389332A0A1B0GUA5 103 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms