RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 C11orf52Q96A22 123 aa4.77□□□□□ -1.65
TDP1-215ENST00000556498 LYZL4Q96KX0 146 aa4.77□□□□□ -1.65
TDP1-215ENST00000556498 PRR25Q96S07 402 aa4.77□□□□□ -1.65
TDP1-215ENST00000556498 HIST1H4GQ99525 98 aa4.77□□□□□ -1.65
TDP1-215ENST00000556498 TMEM243Q9BU79 118 aa4.77□□□□□ -1.65
TDP1-215ENST00000556498 MIA3Q5JRA6 1907 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 TRBV25-1A0A075B6N4 114 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 A0A0D9SEW6 157 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 LOC107984156A0A0G2JMH3 177 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 TRBV10-2A0A0K0K1G8 114 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 A0A1B0GXF2 115 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 C19orf71A6NCJ1 209 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 LINC00473A8K010 186 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 INS-IGF2F8WCM5 200 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 MGST3O14880 152 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 ZNF823P16415 610 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 MIC13Q5XKP0 118 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 ZFP2Q6ZN57 461 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 SDIM1Q6ZPB5 146 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 ARL17AQ8IVW1 177 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 RITA1Q96K30 269 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 CXCL16Q9H2A7 254 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 C11orf68Q9H3H3 251 aaKnown RBP4.76□□□□□ -1.65
TDP1-215ENST00000556498 ZNF492Q9P255 531 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 MOB4Q9Y3A3 225 aa4.76□□□□□ -1.65
TDP1-215ENST00000556498 A0A0B4J2C4 111 aa4.75□□□□□ -1.65
TDP1-215ENST00000556498 F6UB75 175 aa4.75□□□□□ -1.65
TDP1-215ENST00000556498 TIMM17BO60830 172 aa4.75□□□□□ -1.65
TDP1-215ENST00000556498 ABCA11PQ4W5N1 156 aa4.75□□□□□ -1.65
TDP1-215ENST00000556498 FP248Q71RG6 208 aaPredicted RBP4.75□□□□□ -1.65
TDP1-215ENST00000556498 PHF5AQ7RTV0 110 aaKnown RBP4.75□□□□□ -1.65
TDP1-215ENST00000556498 NTN5Q8WTR8 489 aaPredicted RBP4.75□□□□□ -1.65
TDP1-215ENST00000556498 VSIG2Q96IQ7 327 aa4.75□□□□□ -1.65
TDP1-215ENST00000556498 DEPPQ9NTK1 212 aa4.75□□□□□ -1.65
TDP1-215ENST00000556498 TAS2R4Q9NYW5 299 aa4.75□□□□□ -1.65
TDP1-215ENST00000556498 TP73-AS1Q9UF72 201 aa4.75□□□□□ -1.65
TDP1-215ENST00000556498 TMEM14AQ9Y6G1 99 aa4.75□□□□□ -1.65
TDP1-215ENST00000556498 TRBV20OR9-2A0A075B6H5 130 aa4.74□□□□□ -1.65
TDP1-215ENST00000556498 CCL24O00175 119 aa4.74□□□□□ -1.65
TDP1-215ENST00000556498 IFI6P09912 130 aa4.74□□□□□ -1.65
TDP1-215ENST00000556498 NPPCP23582 126 aa4.74□□□□□ -1.65
TDP1-215ENST00000556498 CKS2P33552 79 aa4.74□□□□□ -1.65
TDP1-215ENST00000556498 PLA2G5P39877 138 aa4.74□□□□□ -1.65
TDP1-215ENST00000556498 MYCNOSP40205 109 aa4.74□□□□□ -1.65
TDP1-215ENST00000556498 UBE2D1P51668 147 aa4.74□□□□□ -1.65
TDP1-215ENST00000556498 SUMO2P61956 95 aaKnown RBP4.74□□□□□ -1.65
TDP1-215ENST00000556498 TMEM30BQ3MIR4 351 aa4.74□□□□□ -1.65
TDP1-215ENST00000556498 WDR38Q5JTN6 314 aa4.74□□□□□ -1.65
TDP1-215ENST00000556498 VN1R4Q7Z5H5 301 aa4.74□□□□□ -1.65
TDP1-215ENST00000556498 NDUFA11Q86Y39 141 aa4.74□□□□□ -1.65
TDP1-215ENST00000556498 TOMM6Q96B49 74 aa4.74□□□□□ -1.65
TDP1-215ENST00000556498 ZNF414Q96IQ9 312 aa4.74□□□□□ -1.65
TDP1-215ENST00000556498 PIKFYVEQ9Y2I7 2098 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 THSD7BQ9C0I4 1608 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 TRBV7-3A0A075B6L6 115 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 TRAV41A0A0B4J266 112 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 PRR32B1ATL7 298 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 H3BP45 60 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 M0R378 163 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 PEX7O00628 323 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 NCBP2P52298 156 aaKnown RBP eCLIP4.73□□□□□ -1.65
TDP1-215ENST00000556498 CCL23P55773 120 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 FAM222AQ5U5X8 452 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 FRG2Q64ET8 278 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 CLEC19AQ6UXS0 136 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 C9orf139Q6ZV77 190 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 LCA10Q71F78 164 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 CLECL1Q8IZS7 167 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 TMEM75Q8N9X5 138 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 NUP37Q8NFH4 326 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 TAF15Q92804 592 aaKnown RBP eCLIP4.73□□□□□ -1.65
TDP1-215ENST00000556498 SIP14410 1827 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 ARFGEF1Q9Y6D6 1849 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 KMT2EQ8IZD2 1858 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 CPAMD8Q8IZJ3 1885 aa4.73□□□□□ -1.65
TDP1-215ENST00000556498 BAZ2BQ9UIF8 2168 aaKnown RBP4.72□□□□□ -1.65
TDP1-215ENST00000556498 IGLV3-22A0A075B6J6 115 aa4.72□□□□□ -1.65
TDP1-215ENST00000556498 A0A0A0MQY5 61 aa4.72□□□□□ -1.65
TDP1-215ENST00000556498 TRAV3A0A0B4J244 114 aa4.72□□□□□ -1.65
TDP1-215ENST00000556498 CEMP1Q6PRD7 247 aaPredicted RBP4.72□□□□□ -1.65
TDP1-215ENST00000556498 ZNF525Q8N782 197 aa4.72□□□□□ -1.65
TDP1-215ENST00000556498 DCANP1Q8TF63 244 aa4.72□□□□□ -1.65
TDP1-215ENST00000556498 URB1-AS1Q96HZ7 61 aa4.72□□□□□ -1.65
TDP1-215ENST00000556498 C17orf77Q96MU5 243 aa4.72□□□□□ -1.65
TDP1-215ENST00000556498 FNDC1Q4ZHG4 1894 aaPredicted RBP4.72□□□□□ -1.65
TDP1-215ENST00000556498 LINC01549A6NIU2 74 aa4.71□□□□□ -1.66
TDP1-215ENST00000556498 IBA57-AS1B1ANH7 110 aa4.71□□□□□ -1.66
TDP1-215ENST00000556498 CCKP06307 115 aa4.71□□□□□ -1.66
TDP1-215ENST00000556498 RNASE2P10153 161 aaKnown RBP4.71□□□□□ -1.66
TDP1-215ENST00000556498 SLC25A16P16260 332 aa4.71□□□□□ -1.66
TDP1-215ENST00000556498 IFI27P40305 119 aaPredicted RBP4.71□□□□□ -1.66
TDP1-215ENST00000556498 MFAP2P55001 183 aa4.71□□□□□ -1.66
TDP1-215ENST00000556498 UBE2BP63146 152 aa4.71□□□□□ -1.66
TDP1-215ENST00000556498 CXCL6P80162 114 aa4.71□□□□□ -1.66
TDP1-215ENST00000556498 TWIST1Q15672 202 aa4.71□□□□□ -1.66
TDP1-215ENST00000556498 UNQ9165/PRO28630Q6UXU0 137 aa4.71□□□□□ -1.66
TDP1-215ENST00000556498 Q6ZVQ6 151 aa4.71□□□□□ -1.66
TDP1-215ENST00000556498 LYZL2Q7Z4W2 148 aa4.71□□□□□ -1.66
TDP1-215ENST00000556498 SFTPA1Q8IWL2 248 aa4.71□□□□□ -1.66
TDP1-215ENST00000556498 GVQW1Q8N7I0 195 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms