RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 CAMLGP49069 296 aa13.1□□□□□ -0.31
CDKN3-209ENST00000556102 OR5I1Q13606 314 aa13.1□□□□□ -0.31
CDKN3-209ENST00000556102 RAB31Q13636 194 aa13.1□□□□□ -0.31
CDKN3-209ENST00000556102 ZNF846Q147U1 533 aa13.1□□□□□ -0.31
CDKN3-209ENST00000556102 RXFP4Q8TDU9 374 aa13.1□□□□□ -0.31
CDKN3-209ENST00000556102 GNPNAT1Q96EK6 184 aaPredicted RBP13.1□□□□□ -0.31
CDKN3-209ENST00000556102 ZNF503Q96F45 646 aa13.1□□□□□ -0.31
CDKN3-209ENST00000556102 ODF3Q96PU9 254 aa13.1□□□□□ -0.31
CDKN3-209ENST00000556102 KRTAP4-5Q9BYR2 181 aa13.1□□□□□ -0.31
CDKN3-209ENST00000556102 C20orf85Q9H1P6 137 aa13.1□□□□□ -0.31
CDKN3-209ENST00000556102 DNAJC4Q9NNZ3 241 aa13.1□□□□□ -0.31
CDKN3-209ENST00000556102 TRAV26-1A0A087WT03 109 aa13.09□□□□□ -0.31
CDKN3-209ENST00000556102 CCSO14618 274 aa13.09□□□□□ -0.31
CDKN3-209ENST00000556102 RLN2P04090 185 aa13.09□□□□□ -0.31
CDKN3-209ENST00000556102 M6PRP20645 277 aa13.09□□□□□ -0.31
CDKN3-209ENST00000556102 GUK1Q16774 197 aa13.09□□□□□ -0.31
CDKN3-209ENST00000556102 Q6ZRG5 221 aa13.09□□□□□ -0.31
CDKN3-209ENST00000556102 Q9H8V8 135 aa13.09□□□□□ -0.31
CDKN3-209ENST00000556102 LSM5Q9Y4Y9 91 aaKnown RBP13.09□□□□□ -0.31
CDKN3-209ENST00000556102 GAGE12BA1L429 117 aa13.08□□□□□ -0.32
CDKN3-209ENST00000556102 SNURFLB1AK76 121 aa13.08□□□□□ -0.32
CDKN3-209ENST00000556102 CDK2AP2O75956 126 aa13.08□□□□□ -0.32
CDKN3-209ENST00000556102 GAGE7O76087 117 aa13.08□□□□□ -0.32
CDKN3-209ENST00000556102 GAGE12FP0CL80 117 aa13.08□□□□□ -0.32
CDKN3-209ENST00000556102 GAGE12GP0CL81 117 aa13.08□□□□□ -0.32
CDKN3-209ENST00000556102 GAGE12IP0CL82 117 aa13.08□□□□□ -0.32
CDKN3-209ENST00000556102 LEPP41159 167 aa13.08□□□□□ -0.32
CDKN3-209ENST00000556102 BCAP31P51572 246 aa13.08□□□□□ -0.32
CDKN3-209ENST00000556102 TTC32Q5I0X7 151 aa13.08□□□□□ -0.32
CDKN3-209ENST00000556102 MIC13Q5XKP0 118 aa13.08□□□□□ -0.32
CDKN3-209ENST00000556102 NRARPQ7Z6K4 114 aa13.08□□□□□ -0.32
CDKN3-209ENST00000556102 OR1L4Q8NGR5 311 aa13.08□□□□□ -0.32
CDKN3-209ENST00000556102 NPIPB6E9PJ23 425 aa13.07□□□□□ -0.32
CDKN3-209ENST00000556102 J3KRW8 73 aa13.07□□□□□ -0.32
CDKN3-209ENST00000556102 CT45A10P0DMU9 189 aa13.07□□□□□ -0.32
CDKN3-209ENST00000556102 HOXA5P20719 270 aa13.07□□□□□ -0.32
CDKN3-209ENST00000556102 CAV2P51636 162 aa13.07□□□□□ -0.32
CDKN3-209ENST00000556102 PFDN5Q99471 154 aa13.07□□□□□ -0.32
CDKN3-209ENST00000556102 PYGO2Q9BRQ0 406 aa13.07□□□□□ -0.32
CDKN3-209ENST00000556102 C11orf1Q9H5F2 150 aa13.07□□□□□ -0.32
CDKN3-209ENST00000556102 UQCC1Q9NVA1 299 aa13.07□□□□□ -0.32
CDKN3-209ENST00000556102 WDR83OSQ9Y284 106 aa13.07□□□□□ -0.32
CDKN3-209ENST00000556102 TRAV5A0A0B4J249 113 aa13.06□□□□□ -0.32
CDKN3-209ENST00000556102 TRAV12-3A0A0B4J271 114 aa13.06□□□□□ -0.32
CDKN3-209ENST00000556102 A0A0J9YY99 117 aa13.06□□□□□ -0.32
CDKN3-209ENST00000556102 FAM25EA8MYX2 175 aa13.06□□□□□ -0.32
CDKN3-209ENST00000556102 H3BNG1 76 aa13.06□□□□□ -0.32
CDKN3-209ENST00000556102 CST7O76096 145 aa13.06□□□□□ -0.32
CDKN3-209ENST00000556102 FAM24AA6NFZ4 105 aa13.05□□□□□ -0.32
CDKN3-209ENST00000556102 PLA2G10O15496 165 aa13.05□□□□□ -0.32
CDKN3-209ENST00000556102 ZNF253O75346 499 aa13.05□□□□□ -0.32
CDKN3-209ENST00000556102 DAZ2Q13117 558 aaKnown RBP13.05□□□□□ -0.32
CDKN3-209ENST00000556102 VWC2Q2TAL6 325 aa13.05□□□□□ -0.32
CDKN3-209ENST00000556102 ZNF431Q8TF32 576 aaPredicted RBP13.05□□□□□ -0.32
CDKN3-209ENST00000556102 MRPL53Q96EL3 112 aaKnown RBP13.05□□□□□ -0.32
CDKN3-209ENST00000556102 UPK3BQ9BT76 320 aa13.05□□□□□ -0.32
CDKN3-209ENST00000556102 Q9H3A6 140 aa13.05□□□□□ -0.32
CDKN3-209ENST00000556102 ZNF586Q9NXT0 402 aa13.05□□□□□ -0.32
CDKN3-209ENST00000556102 C5orf51A6NDU8 294 aa13.04□□□□□ -0.32
CDKN3-209ENST00000556102 LYRM1O43325 122 aa13.04□□□□□ -0.32
CDKN3-209ENST00000556102 TCRBP04435 133 aa13.04□□□□□ -0.32
CDKN3-209ENST00000556102 PVALBP20472 110 aaPredicted RBP13.04□□□□□ -0.32
CDKN3-209ENST00000556102 RPL29P47914 159 aaKnown RBP13.04□□□□□ -0.32
CDKN3-209ENST00000556102 C12orf45Q8N5I9 185 aaPredicted RBP13.04□□□□□ -0.32
CDKN3-209ENST00000556102 KRTAP1-5Q9BYS1 174 aa13.04□□□□□ -0.32
CDKN3-209ENST00000556102 SLC39A9Q9NUM3 307 aa13.04□□□□□ -0.32
CDKN3-209ENST00000556102 APOBP04114 4563 aaKnown RBP13.03□□□□□ -0.32
CDKN3-209ENST00000556102 UBE2L5PA0A1B0GUS4 154 aa13.03□□□□□ -0.32
CDKN3-209ENST00000556102 SLC25A5P05141 298 aaKnown RBP13.03□□□□□ -0.32
CDKN3-209ENST00000556102 BAXQ07812 192 aa13.03□□□□□ -0.32
CDKN3-209ENST00000556102 ESRGQ1W209 222 aa13.03□□□□□ -0.32
CDKN3-209ENST00000556102 Q6ZTI0 123 aa13.03□□□□□ -0.32
CDKN3-209ENST00000556102 C2orf50Q96LR7 162 aa13.03□□□□□ -0.32
CDKN3-209ENST00000556102 SEC22CQ9BRL7 303 aa13.03□□□□□ -0.32
CDKN3-209ENST00000556102 TMPRSS5Q9H3S3 457 aa13.03□□□□□ -0.32
CDKN3-209ENST00000556102 MRPS16Q9Y3D3 137 aaKnown RBP13.03□□□□□ -0.32
CDKN3-209ENST00000556102 TRBV19A0A075B6N1 114 aa13.02□□□□□ -0.33
CDKN3-209ENST00000556102 TRAV6A0A075B6T7 132 aa13.02□□□□□ -0.33
CDKN3-209ENST00000556102 A0A1W2PPQ1 181 aa13.02□□□□□ -0.33
CDKN3-209ENST00000556102 S100A11P31949 105 aa13.02□□□□□ -0.33
CDKN3-209ENST00000556102 SULT1A1P50225 295 aa13.02□□□□□ -0.33
CDKN3-209ENST00000556102 CHAC2Q8WUX2 184 aa13.02□□□□□ -0.33
CDKN3-209ENST00000556102 LYRM2Q9NU23 88 aaPredicted RBP13.02□□□□□ -0.33
CDKN3-209ENST00000556102 TMEM14CQ9P0S9 112 aa13.02□□□□□ -0.33
CDKN3-209ENST00000556102 DNAH5Q8TE73 4624 aa13.01□□□□□ -0.33
CDKN3-209ENST00000556102 C7orf71A4D174 169 aa13.01□□□□□ -0.33
CDKN3-209ENST00000556102 M0R3E3 92 aa13.01□□□□□ -0.33
CDKN3-209ENST00000556102 HBG1P69891 147 aa13.01□□□□□ -0.33
CDKN3-209ENST00000556102 HBG2P69892 147 aa13.01□□□□□ -0.33
CDKN3-209ENST00000556102 SPATA12Q7Z6I5 190 aa13.01□□□□□ -0.33
CDKN3-209ENST00000556102 MAPKAPK5-AS1Q8N8E1 139 aa13.01□□□□□ -0.33
CDKN3-209ENST00000556102 ZNF680Q8NEM1 530 aa13.01□□□□□ -0.33
CDKN3-209ENST00000556102 C18orf15Q96N68 181 aa13.01□□□□□ -0.33
CDKN3-209ENST00000556102 NUDT15Q9NV35 164 aa13.01□□□□□ -0.33
CDKN3-209ENST00000556102 PRELID1Q9Y255 219 aa13.01□□□□□ -0.33
CDKN3-209ENST00000556102 IGSF23A1L1A6 192 aa13□□□□□ -0.33
CDKN3-209ENST00000556102 KLLNB2CW77 178 aa13□□□□□ -0.33
CDKN3-209ENST00000556102 HIST1H1EP10412 219 aaKnown RBP13□□□□□ -0.33
CDKN3-209ENST00000556102 BTF3P20290 206 aaKnown RBP13□□□□□ -0.33
CDKN3-209ENST00000556102 S100A10P60903 97 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms