RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 CSN1S1P47710 185 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 CDX1P47902 265 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-235ENST00000556082 TPPP2P59282 170 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 C9orf152Q5JTZ5 239 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 C16orf54Q6UWD8 224 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 TSKUQ8WUA8 353 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 C17orf77Q96MU5 243 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 METTL26Q96S19 204 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 GNB1LQ9BYB4 327 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 CLEC5AQ9NY25 188 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 VPREB3Q9UKI3 123 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 PTPN13Q12923 2485 aa6.38□□□□□ -1.39
ATXN3-235ENST00000556082 IZUMO1RA6ND01 250 aa6.37□□□□□ -1.39
ATXN3-235ENST00000556082 MT-ND6P03923 174 aa6.37□□□□□ -1.39
ATXN3-235ENST00000556082 NDUFA6P56556 154 aa6.37□□□□□ -1.39
ATXN3-235ENST00000556082 PSG3Q16557 428 aa6.37□□□□□ -1.39
ATXN3-235ENST00000556082 PRR31Q5SQ13 230 aa6.37□□□□□ -1.39
ATXN3-235ENST00000556082 WDR73Q6P4I2 378 aa6.37□□□□□ -1.39
ATXN3-235ENST00000556082 GOLT1AQ6ZVE7 132 aa6.37□□□□□ -1.39
ATXN3-235ENST00000556082 Q86TA4 180 aa6.37□□□□□ -1.39
ATXN3-235ENST00000556082 LINC00518Q8N0U6 118 aa6.37□□□□□ -1.39
ATXN3-235ENST00000556082 OR4B1Q8NGF8 309 aa6.37□□□□□ -1.39
ATXN3-235ENST00000556082 WIPF2Q8TF74 440 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-235ENST00000556082 SLC50A1Q9BRV3 221 aa6.37□□□□□ -1.39
ATXN3-235ENST00000556082 GFRA4Q9GZZ7 299 aa6.37□□□□□ -1.39
ATXN3-235ENST00000556082 GNB4Q9HAV0 340 aa6.37□□□□□ -1.39
ATXN3-235ENST00000556082 ZNF331Q9NQX6 463 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-235ENST00000556082 PSG8Q9UQ74 426 aa6.37□□□□□ -1.39
ATXN3-235ENST00000556082 TRAPPC1Q9Y5R8 145 aa6.37□□□□□ -1.39
ATXN3-235ENST00000556082 KMT2BQ9UMN6 2715 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-235ENST00000556082 NAV2Q8IVL1 2488 aa6.37□□□□□ -1.39
ATXN3-235ENST00000556082 RBAKDNA6NC62 111 aa6.36□□□□□ -1.39
ATXN3-235ENST00000556082 A8MWL6 223 aa6.36□□□□□ -1.39
ATXN3-235ENST00000556082 K7EMT4 169 aa6.36□□□□□ -1.39
ATXN3-235ENST00000556082 PSMB8P28062 276 aa6.36□□□□□ -1.39
ATXN3-235ENST00000556082 ARL3P36405 182 aa6.36□□□□□ -1.39
ATXN3-235ENST00000556082 FOXA3P55318 350 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-235ENST00000556082 SAPCD1Q5SSQ6 148 aa6.36□□□□□ -1.39
ATXN3-235ENST00000556082 Q8N2B8 174 aa6.36□□□□□ -1.39
ATXN3-235ENST00000556082 TMEM86BQ8N661 226 aa6.36□□□□□ -1.39
ATXN3-235ENST00000556082 NHLRC2Q8NBF2 726 aa6.36□□□□□ -1.39
ATXN3-235ENST00000556082 MAPK1IP1LQ8NDC0 245 aa6.36□□□□□ -1.39
ATXN3-235ENST00000556082 MRPL53Q96EL3 112 aaKnown RBP6.36□□□□□ -1.39
ATXN3-235ENST00000556082 NOL4LQ96MY1 436 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-235ENST00000556082 FOXC2Q99958 501 aa6.36□□□□□ -1.39
ATXN3-235ENST00000556082 KLK15Q9H2R5 256 aa6.36□□□□□ -1.39
ATXN3-235ENST00000556082 RPP21Q9H633 154 aaKnown RBP6.36□□□□□ -1.39
ATXN3-235ENST00000556082 SERTAD4Q9NUC0 356 aa6.36□□□□□ -1.39
ATXN3-235ENST00000556082 NAT8BQ9UHF3 227 aa6.36□□□□□ -1.39
ATXN3-235ENST00000556082 LINC00527Q9UJ94 153 aa6.36□□□□□ -1.39
ATXN3-235ENST00000556082 FBN2P35556 2912 aa6.36□□□□□ -1.39
ATXN3-235ENST00000556082 PRRC2AP48634 2157 aaKnown RBP6.35□□□□□ -1.39
ATXN3-235ENST00000556082 ZNF785A8K8V0 405 aa6.35□□□□□ -1.39
ATXN3-235ENST00000556082 P01737 135 aa6.35□□□□□ -1.39
ATXN3-235ENST00000556082 PF4V1P10720 104 aa6.35□□□□□ -1.39
ATXN3-235ENST00000556082 LCN12Q6JVE5 192 aa6.35□□□□□ -1.39
ATXN3-235ENST00000556082 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.35□□□□□ -1.39
ATXN3-235ENST00000556082 LINC00322Q6ZN03 302 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-235ENST00000556082 ATP5L2Q7Z4Y8 100 aa6.35□□□□□ -1.39
ATXN3-235ENST00000556082 PRNTQ86SH4 94 aa6.35□□□□□ -1.39
ATXN3-235ENST00000556082 GPHB5Q86YW7 130 aa6.35□□□□□ -1.39
ATXN3-235ENST00000556082 HIST3H2BBQ8N257 126 aa6.35□□□□□ -1.39
ATXN3-235ENST00000556082 RNF152Q8N8N0 203 aa6.35□□□□□ -1.39
ATXN3-235ENST00000556082 OR4X2Q8NGF9 303 aa6.35□□□□□ -1.39
ATXN3-235ENST00000556082 DAZAP1Q96EP5 407 aaKnown RBP6.35□□□□□ -1.39
ATXN3-235ENST00000556082 NPFFR1Q9GZQ6 430 aa6.35□□□□□ -1.39
ATXN3-235ENST00000556082 RPH3ALQ9UNE2 315 aa6.35□□□□□ -1.39
ATXN3-235ENST00000556082 ASH1LQ9NR48 2969 aaKnown RBP6.34□□□□□ -1.39
ATXN3-235ENST00000556082 TRAV8-1A0A0A6YYK1 113 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 IGHV3-35A0A0C4DH35 117 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 A0A1W2PS18 150 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 IFITM10A6NMD0 228 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 M0R3E3 92 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 CHEK1O14757 476 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 HLA-DQA1P01909 254 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 ELANEP08246 267 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 SMIM6P0DI80 62 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 AKR1D1P51857 326 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 SLC35B1P78383 322 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 FOXE3Q13461 319 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 TMEM136Q6ZRR5 245 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 GBGT1Q8N5D6 347 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 NUP35Q8NFH5 326 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 MYOZ3Q8TDC0 251 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 GLMPQ8WWB7 406 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 SGK494Q96LW2 274 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 PPP1R14DQ9NXH3 145 aa6.34□□□□□ -1.39
ATXN3-235ENST00000556082 PEF1Q9UBV8 284 aaKnown RBP6.34□□□□□ -1.39
ATXN3-235ENST00000556082 ANKRD17O75179 2603 aaKnown RBP6.33□□□□□ -1.4
ATXN3-235ENST00000556082 A0A1B0GXF2 115 aa6.33□□□□□ -1.4
ATXN3-235ENST00000556082 XKRY2A2RUG3 117 aa6.33□□□□□ -1.4
ATXN3-235ENST00000556082 HOXA3O43365 443 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-235ENST00000556082 APOHP02749 345 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-235ENST00000556082 CBLN1P23435 193 aa6.33□□□□□ -1.4
ATXN3-235ENST00000556082 CRIP1P50238 77 aa6.33□□□□□ -1.4
ATXN3-235ENST00000556082 SRSF2Q01130 221 aaKnown RBP6.33□□□□□ -1.4
ATXN3-235ENST00000556082 Q0VG73 95 aa6.33□□□□□ -1.4
ATXN3-235ENST00000556082 PRR27Q6MZM9 219 aa6.33□□□□□ -1.4
ATXN3-235ENST00000556082 RBPMS2Q6ZRY4 209 aaKnown RBP6.33□□□□□ -1.4
ATXN3-235ENST00000556082 CIARTQ8N365 385 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms