RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 NRARPQ7Z6K4 114 aa8.92□□□□□ -0.98
HNRNPC-221ENST00000555883 C12orf45Q8N5I9 185 aaPredicted RBP8.92□□□□□ -0.98
HNRNPC-221ENST00000555883 MRPL53Q96EL3 112 aaKnown RBP8.92□□□□□ -0.98
HNRNPC-221ENST00000555883 KRTAP17-1Q9BYP8 105 aa8.92□□□□□ -0.98
HNRNPC-221ENST00000555883 LSM5Q9Y4Y9 91 aaKnown RBP8.92□□□□□ -0.98
HNRNPC-221ENST00000555883 IGLV2-18A0A075B6J9 118 aa8.91□□□□□ -0.98
HNRNPC-221ENST00000555883 TRAV6A0A075B6T7 132 aa8.91□□□□□ -0.98
HNRNPC-221ENST00000555883 C5orf51A6NDU8 294 aa8.91□□□□□ -0.98
HNRNPC-221ENST00000555883 FAM25EA8MYX2 175 aa8.91□□□□□ -0.98
HNRNPC-221ENST00000555883 SLC17A3O00476 420 aa8.91□□□□□ -0.98
HNRNPC-221ENST00000555883 MPDU1O75352 247 aa8.91□□□□□ -0.98
HNRNPC-221ENST00000555883 BCAP31P51572 246 aa8.91□□□□□ -0.98
HNRNPC-221ENST00000555883 HBG1P69891 147 aa8.91□□□□□ -0.98
HNRNPC-221ENST00000555883 HBG2P69892 147 aa8.91□□□□□ -0.98
HNRNPC-221ENST00000555883 C1orf134Q5TEV5 83 aa8.91□□□□□ -0.98
HNRNPC-221ENST00000555883 LINC00612Q8N6U2 182 aa8.91□□□□□ -0.98
HNRNPC-221ENST00000555883 ZNF503Q96F45 646 aa8.91□□□□□ -0.98
HNRNPC-221ENST00000555883 ATG101Q9BSB4 218 aa8.91□□□□□ -0.98
HNRNPC-221ENST00000555883 NPIPB6E9PJ23 425 aa8.9□□□□□ -0.98
HNRNPC-221ENST00000555883 F5H768 121 aa8.9□□□□□ -0.98
HNRNPC-221ENST00000555883 H3BQ15 152 aa8.9□□□□□ -0.98
HNRNPC-221ENST00000555883 CST7O76096 145 aa8.9□□□□□ -0.98
HNRNPC-221ENST00000555883 H2AFB2P0C5Z0 115 aa8.9□□□□□ -0.98
HNRNPC-221ENST00000555883 PDE6HQ13956 83 aa8.9□□□□□ -0.98
HNRNPC-221ENST00000555883 ATP6V1FQ16864 119 aa8.9□□□□□ -0.98
HNRNPC-221ENST00000555883 GFI1BQ5VTD9 330 aa8.9□□□□□ -0.98
HNRNPC-221ENST00000555883 MIC13Q5XKP0 118 aa8.9□□□□□ -0.98
HNRNPC-221ENST00000555883 STX12Q86Y82 276 aa8.9□□□□□ -0.98
HNRNPC-221ENST00000555883 CCDC28AQ8IWP9 274 aa8.9□□□□□ -0.98
HNRNPC-221ENST00000555883 TMEM252Q8N6L7 170 aa8.9□□□□□ -0.98
HNRNPC-221ENST00000555883 ZNRF2Q8NHG8 242 aa8.9□□□□□ -0.98
HNRNPC-221ENST00000555883 SEC22CQ9BRL7 303 aa8.9□□□□□ -0.98
HNRNPC-221ENST00000555883 SLC39A9Q9NUM3 307 aa8.9□□□□□ -0.98
HNRNPC-221ENST00000555883 TMEM14CQ9P0S9 112 aa8.9□□□□□ -0.98
HNRNPC-221ENST00000555883 FAM24AA6NFZ4 105 aa8.89□□□□□ -0.99
HNRNPC-221ENST00000555883 PRAC2D3DTV9 90 aa8.89□□□□□ -0.99
HNRNPC-221ENST00000555883 H3BNG1 76 aa8.89□□□□□ -0.99
HNRNPC-221ENST00000555883 LEPP41159 167 aa8.89□□□□□ -0.99
HNRNPC-221ENST00000555883 CCL18P55774 89 aa8.89□□□□□ -0.99
HNRNPC-221ENST00000555883 FCN2Q15485 313 aa8.89□□□□□ -0.99
HNRNPC-221ENST00000555883 PYGO2Q9BRQ0 406 aa8.89□□□□□ -0.99
HNRNPC-221ENST00000555883 NOP10Q9NPE3 64 aaKnown RBP8.89□□□□□ -0.99
HNRNPC-221ENST00000555883 PRELID1Q9Y255 219 aa8.89□□□□□ -0.99
HNRNPC-221ENST00000555883 DNAH11Q96DT5 4516 aa8.88□□□□□ -0.99
HNRNPC-221ENST00000555883 TRBV19A0A075B6N1 114 aa8.88□□□□□ -0.99
HNRNPC-221ENST00000555883 UBE2L5PA0A1B0GUS4 154 aa8.88□□□□□ -0.99
HNRNPC-221ENST00000555883 FAM240BA0A1B0GVZ2 78 aa8.88□□□□□ -0.99
HNRNPC-221ENST00000555883 HTN1P15515 57 aa8.88□□□□□ -0.99
HNRNPC-221ENST00000555883 BAXQ07812 192 aa8.88□□□□□ -0.99
HNRNPC-221ENST00000555883 DAZ2Q13117 558 aaKnown RBP8.88□□□□□ -0.99
HNRNPC-221ENST00000555883 RAB32Q13637 225 aa8.88□□□□□ -0.99
HNRNPC-221ENST00000555883 ZNF586Q9NXT0 402 aa8.88□□□□□ -0.99
HNRNPC-221ENST00000555883 NACAE9PAV3 2078 aa8.87□□□□□ -0.99
HNRNPC-221ENST00000555883 NBDYA0A0U1RRE5 68 aa8.87□□□□□ -0.99
HNRNPC-221ENST00000555883 IGSF23A1L1A6 192 aa8.87□□□□□ -0.99
HNRNPC-221ENST00000555883 NUDT3O95989 172 aa8.87□□□□□ -0.99
HNRNPC-221ENST00000555883 SLC25A5P05141 298 aaKnown RBP8.87□□□□□ -0.99
HNRNPC-221ENST00000555883 SNRPCP09234 159 aaKnown RBP8.87□□□□□ -0.99
HNRNPC-221ENST00000555883 CT45A10P0DMU9 189 aa8.87□□□□□ -0.99
HNRNPC-221ENST00000555883 HIST1H1EP10412 219 aaKnown RBP8.87□□□□□ -0.99
HNRNPC-221ENST00000555883 M6PRP20645 277 aa8.87□□□□□ -0.99
HNRNPC-221ENST00000555883 S100A10P60903 97 aa8.87□□□□□ -0.99
HNRNPC-221ENST00000555883 ASAH1Q13510 395 aa8.87□□□□□ -0.99
HNRNPC-221ENST00000555883 KIR3DS1Q14943 382 aa8.87□□□□□ -0.99
HNRNPC-221ENST00000555883 MZT2BQ6NZ67 158 aa8.87□□□□□ -0.99
HNRNPC-221ENST00000555883 RNF141Q8WVD5 230 aa8.87□□□□□ -0.99
HNRNPC-221ENST00000555883 S100ZQ8WXG8 99 aa8.87□□□□□ -0.99
HNRNPC-221ENST00000555883 C18orf15Q96N68 181 aa8.87□□□□□ -0.99
HNRNPC-221ENST00000555883 LINC00467Q9BRT7 94 aa8.87□□□□□ -0.99
HNRNPC-221ENST00000555883 DYNC1H1Q14204 4646 aaKnown RBP8.87□□□□□ -0.99
HNRNPC-221ENST00000555883 TRAV5A0A0B4J249 113 aa8.86□□□□□ -0.99
HNRNPC-221ENST00000555883 SNURFLB1AK76 121 aa8.86□□□□□ -0.99
HNRNPC-221ENST00000555883 H3BTX0 84 aa8.86□□□□□ -0.99
HNRNPC-221ENST00000555883 RLN2P04090 185 aa8.86□□□□□ -0.99
HNRNPC-221ENST00000555883 NMBP08949 121 aa8.86□□□□□ -0.99
HNRNPC-221ENST00000555883 RXFP4Q8TDU9 374 aa8.86□□□□□ -0.99
HNRNPC-221ENST00000555883 FAM19A4Q96LR4 140 aa8.86□□□□□ -0.99
HNRNPC-221ENST00000555883 LINC00477Q96M19 166 aa8.86□□□□□ -0.99
HNRNPC-221ENST00000555883 NPCDR1Q9BY65 106 aa8.86□□□□□ -0.99
HNRNPC-221ENST00000555883 LINC00588Q9Y4M8 146 aa8.86□□□□□ -0.99
HNRNPC-221ENST00000555883 KLLNB2CW77 178 aa8.85□□□□□ -0.99
HNRNPC-221ENST00000555883 NDUFB4O95168 129 aa8.85□□□□□ -0.99
HNRNPC-221ENST00000555883 FGF7P21781 194 aa8.85□□□□□ -0.99
HNRNPC-221ENST00000555883 CLINT1Q14677 625 aa8.85□□□□□ -0.99
HNRNPC-221ENST00000555883 C6orf223Q8N319 242 aa8.85□□□□□ -0.99
HNRNPC-221ENST00000555883 ZNF680Q8NEM1 530 aa8.85□□□□□ -0.99
HNRNPC-221ENST00000555883 GNPNAT1Q96EK6 184 aaPredicted RBP8.85□□□□□ -0.99
HNRNPC-221ENST00000555883 UPK3BQ9BT76 320 aa8.85□□□□□ -0.99
HNRNPC-221ENST00000555883 PARD6GQ9BYG4 376 aaPredicted RBP8.85□□□□□ -0.99
HNRNPC-221ENST00000555883 GPN1Q9HCN4 374 aaPredicted RBP8.85□□□□□ -0.99
HNRNPC-221ENST00000555883 TRAV12-3A0A0B4J271 114 aa8.84□□□□□ -0.99
HNRNPC-221ENST00000555883 C7orf71A4D174 169 aa8.84□□□□□ -0.99
HNRNPC-221ENST00000555883 PRB4P10163 310 aaPredicted RBP8.84□□□□□ -0.99
HNRNPC-221ENST00000555883 CRISP2P16562 243 aa8.84□□□□□ -0.99
HNRNPC-221ENST00000555883 BTF3P20290 206 aaKnown RBP8.84□□□□□ -0.99
HNRNPC-221ENST00000555883 ANXA2RQ3ZCQ2 193 aa8.84□□□□□ -0.99
HNRNPC-221ENST00000555883 C9orf47Q6ZRZ4 202 aa8.84□□□□□ -0.99
HNRNPC-221ENST00000555883 SSX7Q7RTT5 188 aa8.84□□□□□ -0.99
HNRNPC-221ENST00000555883 NMES1Q9C002 83 aa8.84□□□□□ -0.99
HNRNPC-221ENST00000555883 SLC25A31Q9H0C2 315 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms