RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 MAGOHBQ96A72 148 aaKnown RBP2.16□□□□□ -2.06
SRP54-209ENST00000555746 FAM19A4Q96LR4 140 aa2.16□□□□□ -2.06
SRP54-209ENST00000555746 THTPAQ9BU02 230 aa2.16□□□□□ -2.06
SRP54-209ENST00000555746 SFXN3Q9BWM7 321 aa2.16□□□□□ -2.06
SRP54-209ENST00000555746 MRPL20Q9BYC9 149 aaKnown RBP2.16□□□□□ -2.06
SRP54-209ENST00000555746 SLIRPQ9GZT3 109 aaKnown RBP2.16□□□□□ -2.06
SRP54-209ENST00000555746 EIF5A2Q9GZV4 153 aaKnown RBP2.16□□□□□ -2.06
SRP54-209ENST00000555746 TMEM191AQ9H0A3 160 aa2.16□□□□□ -2.06
SRP54-209ENST00000555746 DEFB127Q9H1M4 99 aa2.16□□□□□ -2.06
SRP54-209ENST00000555746 EDA2RQ9HAV5 297 aa2.16□□□□□ -2.06
SRP54-209ENST00000555746 DAZ1Q9NQZ3 744 aaKnown RBP2.16□□□□□ -2.06
SRP54-209ENST00000555746 RPRMQ9NS64 109 aa2.16□□□□□ -2.06
SRP54-209ENST00000555746 FBXL12Q9NXK8 326 aa2.16□□□□□ -2.06
SRP54-209ENST00000555746 BET1LQ9NYM9 111 aa2.16□□□□□ -2.06
SRP54-209ENST00000555746 CALYQ9NYX4 217 aa2.16□□□□□ -2.06
SRP54-209ENST00000555746 SHPKQ9UHJ6 478 aa2.16□□□□□ -2.06
SRP54-209ENST00000555746 RPUSD1Q9UJJ7 312 aaKnown RBP2.16□□□□□ -2.06
SRP54-209ENST00000555746 IER3IP1Q9Y5U9 82 aa2.16□□□□□ -2.06
SRP54-209ENST00000555746 KCNE3Q9Y6H6 103 aa2.16□□□□□ -2.06
SRP54-209ENST00000555746 PXMP4Q9Y6I8 212 aa2.16□□□□□ -2.06
SRP54-209ENST00000555746 FRAS1Q86XX4 4008 aa2.16□□□□□ -2.06
SRP54-209ENST00000555746 TRAV8-6A0A0B4J262 113 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 TRAV4A0A0B4J268 109 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 IGHV3OR16-9A0A0B4J2B5 98 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 IGHV5-10-1A0A0J9YXX1 117 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 LOC107984640A0A0U1RRK4 108 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 PGPA6NDG6 321 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 H3BP45 60 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 J3QQQ9 107 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 HCRTO43612 131 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 MRPS14O60783 128 aaKnown RBP2.15□□□□□ -2.07
SRP54-209ENST00000555746 CA2P00918 260 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 CTSDP07339 412 aaPredicted RBP2.15□□□□□ -2.07
SRP54-209ENST00000555746 SPINK8P0C7L1 97 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 RBMY1A1P0DJD3 496 aaKnown RBP2.15□□□□□ -2.07
SRP54-209ENST00000555746 ZNF728P0DKX0 622 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 ERGP11308 486 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 CCL1P22362 96 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 GADD45AP24522 165 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 PPP1CAP62136 330 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 PNOCQ13519 176 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 ENDOGQ14249 297 aaKnown RBP2.15□□□□□ -2.07
SRP54-209ENST00000555746 HES1Q14469 280 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 VMA21Q3ZAQ7 101 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 CENPWQ5EE01 88 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 LCN8Q6JVE9 175 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 SBSNQ6UWP8 590 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 LCN15Q6UWW0 184 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 CLEC19AQ6UXS0 136 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 FOXI2Q6ZQN5 318 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 Q6ZRU5 148 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 ZCCHC24Q8N2G6 241 aaKnown RBP2.15□□□□□ -2.07
SRP54-209ENST00000555746 NPWQ8N729 165 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 ZFP62Q8NB50 900 aaPredicted RBP2.15□□□□□ -2.07
SRP54-209ENST00000555746 LY6G5BQ8NDX9 201 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 NPBQ8NG41 125 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 OR5D14Q8NGL3 314 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 OR4C16Q8NGL9 310 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 OR52P1PQ8NH57 321 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 SLC25A40Q8TBP6 338 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 C15orf40Q8WUR7 153 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 KLK6Q92876 244 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 BORCS8Q96FH0 119 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 TEX37Q96LM6 180 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 LINC00167Q96N53 147 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 NMNAT3Q96T66 252 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 SLC25A21Q9BQT8 299 aaPredicted RBP2.15□□□□□ -2.07
SRP54-209ENST00000555746 VAMP8Q9BV40 100 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 RTL8AQ9BWD3 113 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 MRPL32Q9BYC8 188 aaKnown RBP2.15□□□□□ -2.07
SRP54-209ENST00000555746 DPY30Q9C005 99 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 TUBA4BQ9H853 241 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 CCL28Q9NRJ3 127 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 SMCO4Q9NRQ5 59 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 CCDC167Q9P0B6 97 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 NOP16Q9Y3C1 178 aaKnown RBP2.15□□□□□ -2.07
SRP54-209ENST00000555746 FIS1Q9Y3D6 152 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 INSIG2Q9Y5U4 225 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 DOCK4Q8N1I0 1966 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 ZNF407Q9C0G0 2248 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 SCN1AP35498 2009 aa2.15□□□□□ -2.07
SRP54-209ENST00000555746 LYSTQ99698 3801 aa2.14□□□□□ -2.07
SRP54-209ENST00000555746 FLG2Q5D862 2391 aaPredicted RBP2.14□□□□□ -2.07
SRP54-209ENST00000555746 TRAV8-3A0A0A6YYJ7 113 aa2.14□□□□□ -2.07
SRP54-209ENST00000555746 TRAV8-1A0A0A6YYK1 113 aa2.14□□□□□ -2.07
SRP54-209ENST00000555746 SPTY2D1-AS1A0A0U1RR47 76 aa2.14□□□□□ -2.07
SRP54-209ENST00000555746 C12orf77C9JDV5 145 aa2.14□□□□□ -2.07
SRP54-209ENST00000555746 GABARAPH6UMI1 98 aa2.14□□□□□ -2.07
SRP54-209ENST00000555746 H7BYZ3 331 aa2.14□□□□□ -2.07
SRP54-209ENST00000555746 SS18L1O75177 396 aaPredicted RBP2.14□□□□□ -2.07
SRP54-209ENST00000555746 LYZL6O75951 148 aa2.14□□□□□ -2.07
SRP54-209ENST00000555746 APOMO95445 188 aa2.14□□□□□ -2.07
SRP54-209ENST00000555746 TNFP01375 233 aa2.14□□□□□ -2.07
SRP54-209ENST00000555746 P0DMU3 169 aa2.14□□□□□ -2.07
SRP54-209ENST00000555746 FAM231AP0DMU4 169 aa2.14□□□□□ -2.07
SRP54-209ENST00000555746 FAM231CP0DMU5 169 aa2.14□□□□□ -2.07
SRP54-209ENST00000555746 ZNF93P35789 620 aaPredicted RBP2.14□□□□□ -2.07
SRP54-209ENST00000555746 INPP1P49441 399 aa2.14□□□□□ -2.07
SRP54-209ENST00000555746 NUDT2P50583 147 aa2.14□□□□□ -2.07
SRP54-209ENST00000555746 TMBIM6P55061 237 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms