RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 GNPDA2Q8TDQ7 276 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 PRR15LQ9BU68 103 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 MAP1LC3BQ9GZQ8 125 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 JMJD1CQ15652 2540 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 FLNAP21333 2647 aaKnown RBP-0.62□□□□□ -2.51
SNX6-204ENST00000555541 HECTD4Q9Y4D8 3996 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 PTPN13Q12923 2485 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 SRRM2Q9UQ35 2752 aaKnown RBP-0.62□□□□□ -2.51
SNX6-204ENST00000555541 DSPPQ9NZW4 1301 aa-0.63□□□□□ -2.51
SNX6-204ENST00000555541 PLXND1Q9Y4D7 1925 aa-0.63□□□□□ -2.51
SNX6-204ENST00000555541 LOC101927531A0A1B0GV80 90 aa-0.63□□□□□ -2.51
SNX6-204ENST00000555541 TCRBP04435 133 aa-0.63□□□□□ -2.51
SNX6-204ENST00000555541 IFNA4P05014 189 aa-0.63□□□□□ -2.51
SNX6-204ENST00000555541 GYPBP06028 91 aa-0.63□□□□□ -2.51
SNX6-204ENST00000555541 CRHP06850 196 aa-0.63□□□□□ -2.51
SNX6-204ENST00000555541 TMBIM6P55061 237 aa-0.63□□□□□ -2.51
SNX6-204ENST00000555541 KRTAP19-7Q3SYF9 63 aa-0.63□□□□□ -2.51
SNX6-204ENST00000555541 HACD4Q5VWC8 232 aa-0.63□□□□□ -2.51
SNX6-204ENST00000555541 ZCCHC23Q6ZST2 131 aa-0.63□□□□□ -2.51
SNX6-204ENST00000555541 TRAPPC5Q8IUR0 188 aa-0.63□□□□□ -2.51
SNX6-204ENST00000555541 PIK3C2GO75747 1445 aa-0.64□□□□□ -2.51
SNX6-204ENST00000555541 MYH7BA7E2Y1 1941 aa-0.64□□□□□ -2.51
SNX6-204ENST00000555541 CEP164Q9UPV0 1460 aa-0.64□□□□□ -2.51
SNX6-204ENST00000555541 TNXBP22105 4242 aa-0.64□□□□□ -2.51
SNX6-204ENST00000555541 K7ERJ3 54 aa-0.64□□□□□ -2.51
SNX6-204ENST00000555541 BANF1O75531 89 aa-0.64□□□□□ -2.51
SNX6-204ENST00000555541 CXCL1P09341 107 aa-0.64□□□□□ -2.51
SNX6-204ENST00000555541 PHBP35232 272 aa-0.64□□□□□ -2.51
SNX6-204ENST00000555541 ARPP19P56211 112 aa-0.64□□□□□ -2.51
SNX6-204ENST00000555541 HIST1H3AP68431 136 aa-0.64□□□□□ -2.51
SNX6-204ENST00000555541 EDDM3AQ14507 147 aa-0.64□□□□□ -2.51
SNX6-204ENST00000555541 C5orf56Q8N8D9 126 aa-0.64□□□□□ -2.51
SNX6-204ENST00000555541 CCDC42Q96M95 316 aa-0.64□□□□□ -2.51
SNX6-204ENST00000555541 BIN3Q9NQY0 253 aa-0.64□□□□□ -2.51
SNX6-204ENST00000555541 TMEM14BQ9NUH8 114 aa-0.64□□□□□ -2.51
SNX6-204ENST00000555541 COL24A1Q17RW2 1714 aa-0.64□□□□□ -2.51
SNX6-204ENST00000555541 MYCBP2O75592 4640 aa-0.65□□□□□ -2.51
SNX6-204ENST00000555541 KMT2CQ8NEZ4 4911 aaKnown RBP-0.65□□□□□ -2.51
SNX6-204ENST00000555541 ZANQ9Y493 2812 aa-0.65□□□□□ -2.51
SNX6-204ENST00000555541 SMIM23A6NLE4 172 aa-0.65□□□□□ -2.51
SNX6-204ENST00000555541 FAM25EA8MYX2 175 aa-0.65□□□□□ -2.51
SNX6-204ENST00000555541 PIAS1O75925 651 aa-0.65□□□□□ -2.51
SNX6-204ENST00000555541 SNCBQ16143 134 aa-0.65□□□□□ -2.51
SNX6-204ENST00000555541 CSAG1Q6PB30 78 aa-0.65□□□□□ -2.51
SNX6-204ENST00000555541 FAM216BQ8N7L0 139 aa-0.65□□□□□ -2.51
SNX6-204ENST00000555541 DDI1Q8WTU0 396 aa-0.65□□□□□ -2.51
SNX6-204ENST00000555541 LLPHQ9BRT6 129 aaKnown RBP-0.65□□□□□ -2.51
SNX6-204ENST00000555541 EFCAB11Q9BUY7 163 aa-0.65□□□□□ -2.51
SNX6-204ENST00000555541 PARVBQ9HBI1 364 aa-0.65□□□□□ -2.51
SNX6-204ENST00000555541 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.65□□□□□ -2.51
SNX6-204ENST00000555541 MRPL35Q9NZE8 188 aaKnown RBP-0.65□□□□□ -2.51
SNX6-204ENST00000555541 OBSL1O75147 1896 aa-0.65□□□□□ -2.51
SNX6-204ENST00000555541 NCOR1O75376 2440 aa-0.66□□□□□ -2.51
SNX6-204ENST00000555541 MAP3K5Q99683 1374 aa-0.66□□□□□ -2.51
SNX6-204ENST00000555541 A0A096LNT2 108 aa-0.66□□□□□ -2.52
SNX6-204ENST00000555541 NBDYA0A0U1RRE5 68 aa-0.66□□□□□ -2.52
SNX6-204ENST00000555541 C3orf85A0A1B0GTC6 90 aa-0.66□□□□□ -2.52
SNX6-204ENST00000555541 F2Z2F3 143 aa-0.66□□□□□ -2.52
SNX6-204ENST00000555541 M0QX08 132 aa-0.66□□□□□ -2.52
SNX6-204ENST00000555541 HMGB3O15347 200 aaKnown RBP-0.66□□□□□ -2.52
SNX6-204ENST00000555541 ATP5HO75947 161 aa-0.66□□□□□ -2.52
SNX6-204ENST00000555541 LYPLA2O95372 231 aa-0.66□□□□□ -2.52
SNX6-204ENST00000555541 RPS17P08708 135 aaKnown RBP-0.66□□□□□ -2.52
SNX6-204ENST00000555541 MPC1LP0DKB6 136 aa-0.66□□□□□ -2.52
SNX6-204ENST00000555541 KLKP1Q107X0 134 aa-0.66□□□□□ -2.52
SNX6-204ENST00000555541 TAF1AQ15573 450 aaPredicted RBP-0.66□□□□□ -2.52
SNX6-204ENST00000555541 TMEM97Q5BJF2 176 aa-0.66□□□□□ -2.52
SNX6-204ENST00000555541 C3orf62Q6ZUJ4 267 aa-0.66□□□□□ -2.52
SNX6-204ENST00000555541 BTF3L4Q96K17 158 aa-0.66□□□□□ -2.52
SNX6-204ENST00000555541 MRPL36Q9P0J6 103 aaKnown RBP-0.66□□□□□ -2.52
SNX6-204ENST00000555541 TPRKBQ9Y3C4 175 aa-0.66□□□□□ -2.52
SNX6-204ENST00000555541 ALMS1Q8TCU4 4167 aa-0.67□□□□□ -2.52
SNX6-204ENST00000555541 BBIP1A8MTZ0 92 aa-0.67□□□□□ -2.52
SNX6-204ENST00000555541 HIGD1CA8MV81 97 aa-0.67□□□□□ -2.52
SNX6-204ENST00000555541 HIST1H2BKO60814 126 aa-0.67□□□□□ -2.52
SNX6-204ENST00000555541 RPP14O95059 124 aaKnown RBP-0.67□□□□□ -2.52
SNX6-204ENST00000555541 HIST1H2BJP06899 126 aa-0.67□□□□□ -2.52
SNX6-204ENST00000555541 SPRR2DP22532 72 aa-0.67□□□□□ -2.52
SNX6-204ENST00000555541 MSMO1Q15800 293 aa-0.67□□□□□ -2.52
SNX6-204ENST00000555541 LINC00269Q8N2A0 174 aa-0.67□□□□□ -2.52
SNX6-204ENST00000555541 NAT14Q8WUY8 206 aa-0.67□□□□□ -2.52
SNX6-204ENST00000555541 ISOC1Q96CN7 298 aa-0.67□□□□□ -2.52
SNX6-204ENST00000555541 OR4C12Q96R67 309 aa-0.67□□□□□ -2.52
SNX6-204ENST00000555541 DSCR8Q96T75 97 aa-0.67□□□□□ -2.52
SNX6-204ENST00000555541 SIGMAR1Q99720 223 aa-0.67□□□□□ -2.52
SNX6-204ENST00000555541 FAM32AQ9Y421 112 aaKnown RBP-0.67□□□□□ -2.52
SNX6-204ENST00000555541 CSMD3Q7Z407 3707 aa-0.67□□□□□ -2.52
SNX6-204ENST00000555541 PCLOQ9Y6V0 5065 aa-0.68□□□□□ -2.52
SNX6-204ENST00000555541 A0A1W2PPB8 328 aa-0.68□□□□□ -2.52
SNX6-204ENST00000555541 KIR3DP1A8MWS1 328 aa-0.68□□□□□ -2.52
SNX6-204ENST00000555541 UNC13BO14795 1591 aa-0.68□□□□□ -2.52
SNX6-204ENST00000555541 MT-ND6P03923 174 aa-0.68□□□□□ -2.52
SNX6-204ENST00000555541 INSL3P51460 131 aa-0.68□□□□□ -2.52
SNX6-204ENST00000555541 COTL1Q14019 142 aa-0.68□□□□□ -2.52
SNX6-204ENST00000555541 DEFB132Q7Z7B7 95 aa-0.68□□□□□ -2.52
SNX6-204ENST00000555541 OR2J1Q9GZK6 312 aa-0.68□□□□□ -2.52
SNX6-204ENST00000555541 NMNAT1Q9HAN9 279 aaPredicted RBP-0.68□□□□□ -2.52
SNX6-204ENST00000555541 MYO5AQ9Y4I1 1855 aaKnown RBP-0.68□□□□□ -2.52
SNX6-204ENST00000555541 PTPRDP23468 1912 aa-0.68□□□□□ -2.52
SNX6-204ENST00000555541 CCDC144AA2RUR9 1427 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms