RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 SAMD10Q9BYL1 202 aa18.77■□□□□ 0.6
TMEM260-207ENST00000555497 KIR2DL5BA0A0G2JN68 375 aa18.77■□□□□ 0.59
TMEM260-207ENST00000555497 KIR2DL5BA0A0G2JPC4 375 aa18.77■□□□□ 0.59
TMEM260-207ENST00000555497 BUB3O43684 328 aa18.77■□□□□ 0.59
TMEM260-207ENST00000555497 KIR2DL5AQ8N109 375 aa18.77■□□□□ 0.59
TMEM260-207ENST00000555497 ALKBH7Q9BT30 221 aaPredicted RBP18.77■□□□□ 0.59
TMEM260-207ENST00000555497 TRBV7-1A0A0A6YYK4 115 aa18.76■□□□□ 0.59
TMEM260-207ENST00000555497 IGHV3-66A0A0C4DH42 116 aa18.76■□□□□ 0.59
TMEM260-207ENST00000555497 FAM231BA6NCW3 169 aa18.76■□□□□ 0.59
TMEM260-207ENST00000555497 CSN1S1P47710 185 aa18.76■□□□□ 0.59
TMEM260-207ENST00000555497 CRIP2P52943 208 aaPredicted RBP18.76■□□□□ 0.59
TMEM260-207ENST00000555497 HIF1ANQ9NWT6 349 aa18.76■□□□□ 0.59
TMEM260-207ENST00000555497 NAGKQ9UJ70 344 aa18.76■□□□□ 0.59
TMEM260-207ENST00000555497 CSMD2Q7Z408 3487 aa18.76■□□□□ 0.59
TMEM260-207ENST00000555497 ZNF705FA8MVS1 300 aaPredicted RBP18.76■□□□□ 0.59
TMEM260-207ENST00000555497 H3BUX3 64 aa18.76■□□□□ 0.59
TMEM260-207ENST00000555497 CHEK1O14757 476 aa18.76■□□□□ 0.59
TMEM260-207ENST00000555497 APOHP02749 345 aaPredicted RBP18.76■□□□□ 0.59
TMEM260-207ENST00000555497 SRSF1Q07955 248 aaKnown RBP eCLIP18.76■□□□□ 0.59
TMEM260-207ENST00000555497 KCNS1Q96KK3 526 aa18.76■□□□□ 0.59
TMEM260-207ENST00000555497 M0R143 59 aa18.75■□□□□ 0.59
TMEM260-207ENST00000555497 ATP5G2Q06055 141 aa18.75■□□□□ 0.59
TMEM260-207ENST00000555497 IGHV3OR16-13A0A075B7E8 117 aa18.74■□□□□ 0.59
TMEM260-207ENST00000555497 IGHV3-74A0A0B4J1X5 117 aa18.74■□□□□ 0.59
TMEM260-207ENST00000555497 FBN2P35556 2912 aa18.74■□□□□ 0.59
TMEM260-207ENST00000555497 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.74■□□□□ 0.593e-6■■■■□ 24
TMEM260-207ENST00000555497 A6NDX4 124 aa18.74■□□□□ 0.59
TMEM260-207ENST00000555497 FOXA3P55318 350 aaPredicted RBP18.74■□□□□ 0.59
TMEM260-207ENST00000555497 VGLL1Q99990 258 aa18.74■□□□□ 0.59
TMEM260-207ENST00000555497 FAM208BQ5VWN6 2430 aa18.73■□□□□ 0.59
TMEM260-207ENST00000555497 ZNF207O43670 478 aaKnown RBP18.73■□□□□ 0.59
TMEM260-207ENST00000555497 SIGLECL1Q8N7X8 197 aa18.73■□□□□ 0.59
TMEM260-207ENST00000555497 IGHV3-49A0A0A0MS15 119 aa18.73■□□□□ 0.59
TMEM260-207ENST00000555497 RAB4AP20338 218 aa18.73■□□□□ 0.59
TMEM260-207ENST00000555497 KLF5Q13887 457 aaPredicted RBP18.73■□□□□ 0.59
TMEM260-207ENST00000555497 SERTM2A0A1B0GWG4 89 aa18.72■□□□□ 0.59
TMEM260-207ENST00000555497 PMCHP20382 165 aa18.72■□□□□ 0.59
TMEM260-207ENST00000555497 Q6ZS46 218 aa18.72■□□□□ 0.59
TMEM260-207ENST00000555497 B4DSR2 109 aa18.72■□□□□ 0.59
TMEM260-207ENST00000555497 TRGV3P03979 118 aa18.72■□□□□ 0.59
TMEM260-207ENST00000555497 AMTP48728 403 aa18.72■□□□□ 0.59
TMEM260-207ENST00000555497 FAM19A2Q8N3H0 131 aa18.72■□□□□ 0.59
TMEM260-207ENST00000555497 Q8TAT8 98 aa18.72■□□□□ 0.59
TMEM260-207ENST00000555497 CSPG4Q6UVK1 2322 aa18.71■□□□□ 0.59
TMEM260-207ENST00000555497 ZNF324O75467 553 aaPredicted RBP18.71■□□□□ 0.59
TMEM260-207ENST00000555497 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.71■□□□□ 0.59
TMEM260-207ENST00000555497 ZNF843Q8N446 348 aa18.71■□□□□ 0.59
TMEM260-207ENST00000555497 NRN1Q9NPD7 142 aa18.71■□□□□ 0.59
TMEM260-207ENST00000555497 HAX1O00165 279 aa18.7■□□□□ 0.58
TMEM260-207ENST00000555497 IGF1P05019 195 aa18.7■□□□□ 0.58
TMEM260-207ENST00000555497 BLCAPP62952 87 aa18.7■□□□□ 0.58
TMEM260-207ENST00000555497 RELQ04864 619 aaPredicted RBP18.7■□□□□ 0.58
TMEM260-207ENST00000555497 LCN12Q6JVE5 192 aa18.7■□□□□ 0.58
TMEM260-207ENST00000555497 ARL6IP6Q8N6S5 226 aa18.7■□□□□ 0.58
TMEM260-207ENST00000555497 PRR25Q96S07 402 aa18.7■□□□□ 0.58
TMEM260-207ENST00000555497 A0A087X0K7 114 aa18.7■□□□□ 0.58
TMEM260-207ENST00000555497 S100A7P31151 101 aa18.7■□□□□ 0.58
TMEM260-207ENST00000555497 FAM223BA6NKX1 122 aa18.69■□□□□ 0.58
TMEM260-207ENST00000555497 PRAC2D3DTV9 90 aa18.69■□□□□ 0.58
TMEM260-207ENST00000555497 IGHG2P01859 326 aa18.69■□□□□ 0.58
TMEM260-207ENST00000555497 ARMS2P0C7Q2 107 aa18.69■□□□□ 0.58
TMEM260-207ENST00000555497 ZNF705DP0CH99 300 aaPredicted RBP18.69■□□□□ 0.58
TMEM260-207ENST00000555497 ZNF705BP0CI00 300 aaPredicted RBP18.69■□□□□ 0.58
TMEM260-207ENST00000555497 NIT1Q86X76 327 aa18.69■□□□□ 0.58
TMEM260-207ENST00000555497 FAM223AQ8IWN6 122 aa18.69■□□□□ 0.58
TMEM260-207ENST00000555497 RNF182Q8N6D2 247 aa18.69■□□□□ 0.58
TMEM260-207ENST00000555497 A1L4Q6 167 aa18.69■□□□□ 0.58
TMEM260-207ENST00000555497 SH2D1AO60880 128 aa18.69■□□□□ 0.58
TMEM260-207ENST00000555497 CT45A10P0DMU9 189 aa18.69■□□□□ 0.58
TMEM260-207ENST00000555497 LRRK2Q5S007 2527 aa18.69■□□□□ 0.58
TMEM260-207ENST00000555497 POLQO75417 2590 aa18.68■□□□□ 0.58
TMEM260-207ENST00000555497 TRBV12-3P01733 135 aa18.68■□□□□ 0.58
TMEM260-207ENST00000555497 PPIFP30405 207 aaKnown RBP18.68■□□□□ 0.58
TMEM260-207ENST00000555497 RAB9AP51151 201 aa18.68■□□□□ 0.58
TMEM260-207ENST00000555497 DSCR9P59020 149 aa18.68■□□□□ 0.58
TMEM260-207ENST00000555497 COX8CQ7Z4L0 72 aa18.68■□□□□ 0.58
TMEM260-207ENST00000555497 TDRG1Q3Y452 100 aa18.68■□□□□ 0.58
TMEM260-207ENST00000555497 URB1-AS1Q96HZ7 61 aa18.68■□□□□ 0.58
TMEM260-207ENST00000555497 U3KQE9 123 aa18.68■□□□□ 0.58
TMEM260-207ENST00000555497 UBR5O95071 2799 aaPredicted RBP18.67■□□□□ 0.58
TMEM260-207ENST00000555497 ANKRD17O75179 2603 aaKnown RBP18.67■□□□□ 0.58
TMEM260-207ENST00000555497 A0A096LNT2 108 aa18.67■□□□□ 0.58
TMEM260-207ENST00000555497 ZNF80P51504 273 aaPredicted RBP18.67■□□□□ 0.58
TMEM260-207ENST00000555497 MRPL52Q86TS9 123 aaKnown RBP18.67■□□□□ 0.58
TMEM260-207ENST00000555497 Q8N976 141 aa18.67■□□□□ 0.58
TMEM260-207ENST00000555497 METTL26Q96S19 204 aa18.67■□□□□ 0.58
TMEM260-207ENST00000555497 A0A1B0GUT8 65 aa18.66■□□□□ 0.58
TMEM260-207ENST00000555497 ERCC8Q13216 396 aa18.66■□□□□ 0.58
TMEM260-207ENST00000555497 USP9YO00507 2555 aaPredicted RBP18.66■□□□□ 0.58
TMEM260-207ENST00000555497 TMSB15BA0A087X1C1 80 aa18.66■□□□□ 0.58
TMEM260-207ENST00000555497 M0QZK8 103 aa18.66■□□□□ 0.58
TMEM260-207ENST00000555497 NTF3P20783 257 aa18.66■□□□□ 0.58
TMEM260-207ENST00000555497 KRTDAPP60985 99 aa18.66■□□□□ 0.58
TMEM260-207ENST00000555497 SAPCD1Q5SSQ6 148 aa18.66■□□□□ 0.58
TMEM260-207ENST00000555497 KLK15Q9H2R5 256 aa18.66■□□□□ 0.58
TMEM260-207ENST00000555497 COX6B1P14854 86 aa18.65■□□□□ 0.58
TMEM260-207ENST00000555497 G0S2P27469 103 aa18.65■□□□□ 0.58
TMEM260-207ENST00000555497 FAM162BQ5T6X4 162 aa18.65■□□□□ 0.58
TMEM260-207ENST00000555497 LOC102724200A0A096LPH7 203 aaPredicted RBP18.65■□□□□ 0.58
TMEM260-207ENST00000555497 SLC25A16P16260 332 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms