RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 KIAA1107Q9UPP5 1409 aa2.23□□□□□ -2.05
VRK1-205ENST00000555402 FANCMQ8IYD8 2048 aa2.22□□□□□ -2.05
VRK1-205ENST00000555402 BCL9LQ86UU0 1499 aa2.22□□□□□ -2.05
VRK1-205ENST00000555402 IGKV1D-42A0A075B6H8 117 aa2.22□□□□□ -2.05
VRK1-205ENST00000555402 OR51F1A6NGY5 319 aa2.22□□□□□ -2.05
VRK1-205ENST00000555402 HMSDA8MTL9 139 aa2.22□□□□□ -2.05
VRK1-205ENST00000555402 METTL15P1P0C7V9 234 aa2.22□□□□□ -2.05
VRK1-205ENST00000555402 TRGC1P0CF51 173 aa2.22□□□□□ -2.05
VRK1-205ENST00000555402 ZNF705BP0CI00 300 aaPredicted RBP2.22□□□□□ -2.05
VRK1-205ENST00000555402 FOXA3P55318 350 aaPredicted RBP2.22□□□□□ -2.05
VRK1-205ENST00000555402 QRFPP83859 136 aa2.22□□□□□ -2.05
VRK1-205ENST00000555402 ESRGQ1W209 222 aa2.22□□□□□ -2.05
VRK1-205ENST00000555402 ZNF791Q3KP31 576 aaPredicted RBP2.22□□□□□ -2.05
VRK1-205ENST00000555402 TMEM155Q4W5P6 130 aa2.22□□□□□ -2.05
VRK1-205ENST00000555402 FAM216BQ8N7L0 139 aa2.22□□□□□ -2.05
VRK1-205ENST00000555402 ZNF418Q8TF45 676 aaPredicted RBP2.22□□□□□ -2.05
VRK1-205ENST00000555402 DIRC1Q969H9 104 aa2.22□□□□□ -2.05
VRK1-205ENST00000555402 CCNB3Q8WWL7 1395 aa2.22□□□□□ -2.05
VRK1-205ENST00000555402 COL1A1P02452 1464 aaPredicted RBP2.21□□□□□ -2.06
VRK1-205ENST00000555402 FAM236AA0A1B0GUQ0 79 aa2.21□□□□□ -2.06
VRK1-205ENST00000555402 FAM236BA0A1B0GV22 79 aa2.21□□□□□ -2.06
VRK1-205ENST00000555402 UQCRQO14949 82 aa2.21□□□□□ -2.06
VRK1-205ENST00000555402 SLC25A5P05141 298 aaKnown RBP2.21□□□□□ -2.06
VRK1-205ENST00000555402 CTSDP07339 412 aaPredicted RBP2.21□□□□□ -2.06
VRK1-205ENST00000555402 AKR1D1P51857 326 aa2.21□□□□□ -2.06
VRK1-205ENST00000555402 SNRPD3P62318 126 aaKnown RBP2.21□□□□□ -2.06
VRK1-205ENST00000555402 CDK5R1Q15078 307 aa2.21□□□□□ -2.06
VRK1-205ENST00000555402 Q6ZQT0 140 aa2.21□□□□□ -2.06
VRK1-205ENST00000555402 IDO2Q6ZQW0 420 aa2.21□□□□□ -2.06
VRK1-205ENST00000555402 HEATR5AQ86XA9 2040 aa2.21□□□□□ -2.06
VRK1-205ENST00000555402 LINC00301Q8NCQ3 95 aa2.21□□□□□ -2.06
VRK1-205ENST00000555402 OR10AC1Q8NH08 325 aa2.21□□□□□ -2.06
VRK1-205ENST00000555402 POP5Q969H6 163 aaKnown RBP2.21□□□□□ -2.06
VRK1-205ENST00000555402 CHCHD1Q96BP2 118 aaKnown RBP2.21□□□□□ -2.06
VRK1-205ENST00000555402 NAA38Q9BRA0 125 aaKnown RBP2.21□□□□□ -2.06
VRK1-205ENST00000555402 TMEM2Q9UHN6 1383 aa2.21□□□□□ -2.06
VRK1-205ENST00000555402 STRCQ7RTU9 1775 aa2.21□□□□□ -2.06
VRK1-205ENST00000555402 SCRIBQ14160 1630 aa2.2□□□□□ -2.06
VRK1-205ENST00000555402 MBD5Q9P267 1494 aa2.2□□□□□ -2.06
VRK1-205ENST00000555402 ICE1Q9Y2F5 2266 aa2.2□□□□□ -2.06
VRK1-205ENST00000555402 ARHGAP31Q2M1Z3 1444 aa2.2□□□□□ -2.06
VRK1-205ENST00000555402 TRAV27A0A087WT01 109 aa2.2□□□□□ -2.06
VRK1-205ENST00000555402 TRAV1-1A0A0B4J248 108 aa2.2□□□□□ -2.06
VRK1-205ENST00000555402 ZNF727A8MUV8 499 aa2.2□□□□□ -2.06
VRK1-205ENST00000555402 F6UZH7 168 aa2.2□□□□□ -2.06
VRK1-205ENST00000555402 HBDP02042 147 aa2.2□□□□□ -2.06
VRK1-205ENST00000555402 SMIM6P0DI80 62 aa2.2□□□□□ -2.06
VRK1-205ENST00000555402 MGST1P10620 155 aaKnown RBP2.2□□□□□ -2.06
VRK1-205ENST00000555402 TPT1P13693 172 aaKnown RBP2.2□□□□□ -2.06
VRK1-205ENST00000555402 FABP4P15090 132 aa2.2□□□□□ -2.06
VRK1-205ENST00000555402 GUCA1AP43080 201 aaPredicted RBP2.2□□□□□ -2.06
VRK1-205ENST00000555402 KRTAP12-1P59990 96 aa2.2□□□□□ -2.06
VRK1-205ENST00000555402 TPRXLQ17RH7 258 aa2.2□□□□□ -2.06
VRK1-205ENST00000555402 GLIPR1L1Q6UWM5 242 aa2.2□□□□□ -2.06
VRK1-205ENST00000555402 TAS2R4Q9NYW5 299 aa2.2□□□□□ -2.06
VRK1-205ENST00000555402 PLXNA3P51805 1871 aa2.2□□□□□ -2.06
VRK1-205ENST00000555402 SCN8AQ9UQD0 1980 aa2.19□□□□□ -2.06
VRK1-205ENST00000555402 NCKAP5O14513 1909 aa2.19□□□□□ -2.06
VRK1-205ENST00000555402 CUL7Q14999 1698 aa2.19□□□□□ -2.06
VRK1-205ENST00000555402 C9orf170A2RU37 121 aa2.19□□□□□ -2.06
VRK1-205ENST00000555402 J3QKU1 62 aa2.19□□□□□ -2.06
VRK1-205ENST00000555402 OR1I1O60431 355 aa2.19□□□□□ -2.06
VRK1-205ENST00000555402 PMP2P02689 132 aa2.19□□□□□ -2.06
VRK1-205ENST00000555402 HLA-DRB4P13762 266 aa2.19□□□□□ -2.06
VRK1-205ENST00000555402 PLGLB1Q02325 96 aa2.19□□□□□ -2.06
VRK1-205ENST00000555402 OCIAD2Q56VL3 154 aa2.19□□□□□ -2.06
VRK1-205ENST00000555402 SPANXN5Q5MJ07 72 aa2.19□□□□□ -2.06
VRK1-205ENST00000555402 HAGHLQ6PII5 290 aaPredicted RBP2.19□□□□□ -2.06
VRK1-205ENST00000555402 Q8IYB0 196 aa2.19□□□□□ -2.06
VRK1-205ENST00000555402 CLEC2BQ92478 149 aa2.19□□□□□ -2.06
VRK1-205ENST00000555402 PDCD10Q9BUL8 212 aa2.19□□□□□ -2.06
VRK1-205ENST00000555402 COMMD3Q9UBI1 195 aa2.19□□□□□ -2.06
VRK1-205ENST00000555402 SOX21Q9Y651 276 aaPredicted RBP2.19□□□□□ -2.06
VRK1-205ENST00000555402 HLA-DRB4X5D2U9 266 aa2.19□□□□□ -2.06
VRK1-205ENST00000555402 PTPRBP23467 1997 aa2.19□□□□□ -2.06
VRK1-205ENST00000555402 MALRD1Q5VYJ5 2156 aa2.18□□□□□ -2.06
VRK1-205ENST00000555402 IGKV2D-26A0A0A0MRZ7 120 aa2.18□□□□□ -2.06
VRK1-205ENST00000555402 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.18□□□□□ -2.06
VRK1-205ENST00000555402 M0R129 80 aa2.18□□□□□ -2.06
VRK1-205ENST00000555402 LYRM1O43325 122 aa2.18□□□□□ -2.06
VRK1-205ENST00000555402 APODP05090 189 aa2.18□□□□□ -2.06
VRK1-205ENST00000555402 HIST1H1BP16401 226 aaKnown RBP2.18□□□□□ -2.06
VRK1-205ENST00000555402 LSM3P62310 102 aaKnown RBP2.18□□□□□ -2.06
VRK1-205ENST00000555402 MRPS10P82664 201 aaKnown RBP2.18□□□□□ -2.06
VRK1-205ENST00000555402 MRPS36P82909 103 aaKnown RBP2.18□□□□□ -2.06
VRK1-205ENST00000555402 ZNF345Q14585 488 aa2.18□□□□□ -2.06
VRK1-205ENST00000555402 RNASE10Q5GAN6 216 aaKnown RBP2.18□□□□□ -2.06
VRK1-205ENST00000555402 TMEM91Q6ZNR0 172 aa2.18□□□□□ -2.06
VRK1-205ENST00000555402 ZNF826PQ6ZT77 177 aa2.18□□□□□ -2.06
VRK1-205ENST00000555402 TMEM191AQ9H0A3 160 aa2.18□□□□□ -2.06
VRK1-205ENST00000555402 C14orf132Q9NPU4 83 aa2.18□□□□□ -2.06
VRK1-205ENST00000555402 FKBP11Q9NYL4 201 aa2.18□□□□□ -2.06
VRK1-205ENST00000555402 TPRKBQ9Y3C4 175 aa2.18□□□□□ -2.06
VRK1-205ENST00000555402 LY96Q9Y6Y9 160 aa2.18□□□□□ -2.06
VRK1-205ENST00000555402 USP54Q70EL1 1684 aa2.18□□□□□ -2.06
VRK1-205ENST00000555402 STRCP1A6NGW2 1772 aa2.18□□□□□ -2.06
VRK1-205ENST00000555402 NAIPQ13075 1403 aa2.17□□□□□ -2.06
VRK1-205ENST00000555402 CNTLNQ9NXG0 1405 aa2.17□□□□□ -2.06
VRK1-205ENST00000555402 MYLKQ15746 1914 aa2.17□□□□□ -2.06
VRK1-205ENST00000555402 ANAPC1Q9H1A4 1944 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms