RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956		A0A0G2JRQ6	117 aa		3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956		A6NJ64	397 aa		3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956	GPR31	O00270	319 aa		3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956	RTL8C	O15255	209 aa		3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956	MRPS14	O60783	128 aa	Known RBP	3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956	SERF1A	O75920	110 aa		3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956	IGKV1-5	P01602	117 aa		3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956	HLA-DMB	P28068	263 aa		3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956	HRH1	P35367	487 aa		3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956	TAS2R20	P59543	309 aa		3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956	LYZ	P61626	148 aa		3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956	PRCD	Q00LT1	54 aa		3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956	NEDD8	Q15843	81 aa		3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956	C12orf74	Q32Q52	190 aa		3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956	THOC7	Q6I9Y2	204 aa	Known RBP	3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956	DIABLO	Q9NR28	239 aa		3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956	PRND	Q9UKY0	176 aa		3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956	PUS1	Q9Y606	427 aa	Known RBP eCLIP	3.5	□□□□□ -1.85
PSMC6-208	ENST00000554956	IGHV1OR15-1	A0A075B7D0	117 aa		3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956	SNAPC5	O75971	98 aa		3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956	IGKV1-17	P01599	117 aa		3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956	IFNA4	P05014	189 aa		3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956	EIF4E	P06730	217 aa	Known RBP	3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956	ZNF688	P0C7X2	276 aa		3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956	RNASE2	P10153	161 aa	Known RBP	3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956	ETV6	P41212	452 aa		3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956	CBX5	P45973	191 aa		3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956	DEFB1	P60022	68 aa		3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956	HSPE1	P61604	102 aa	Known RBP	3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956	LSM3	P62310	102 aa	Known RBP	3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956		Q6ZN92	141 aa		3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956	CMTM1	Q8IZ96	169 aa		3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956	OR5H2	Q8NGV7	314 aa		3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956	OR52E5	Q8NH55	327 aa		3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956	DCANP1	Q8TF63	244 aa		3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956	TMEM56	Q96MV1	263 aa		3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956	TP53RK	Q96S44	253 aa		3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956	IFT46	Q9NQC8	304 aa		3.49	□□□□□ -1.85
PSMC6-208	ENST00000554956		M0R2N4	97 aa		3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	DNASE2	O00115	360 aa	Predicted RBP	3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	CYB5B	O43169	146 aa		3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	GNG7	O60262	68 aa		3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	ATP6V1G2	O95670	118 aa		3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	TBP	P20226	339 aa		3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	CRYBB3	P26998	211 aa		3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	PRSS3	P35030	304 aa		3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	CMC4	P56277	68 aa	Predicted RBP	3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	SP6	Q3SY56	376 aa		3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	UBE2NL	Q5JXB2	153 aa		3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	TMEM69	Q5SWH9	247 aa		3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	SNX29P2	Q8IUI4	249 aa		3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	DUSP18	Q8NEJ0	188 aa		3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	LYPD6B	Q8NI32	183 aa		3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	YIPF6	Q96EC8	236 aa		3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	S100A16	Q96FQ6	103 aa	Known RBP	3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	VSIG2	Q96IQ7	327 aa		3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	C6orf62	Q9GZU0	229 aa	Predicted RBP	3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	FKBP11	Q9NYL4	201 aa		3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	RABAC1	Q9UI14	185 aa		3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	DNAH6	Q9C0G6	4158 aa		3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	DYNC1H1	Q14204	4646 aa	Known RBP	3.48	□□□□□ -1.85
PSMC6-208	ENST00000554956	DNAH11	Q96DT5	4516 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	TRAV2	A0A0B4J234	112 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	INS-IGF2	F8WCM5	200 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	SIVA1	O15304	175 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	IGLC1	P0CG04	106 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	ELK1	P19419	428 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	NPPC	P23582	126 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	KRTAP5-9	P26371	169 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	TAS2R46	P59540	309 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	TSPAN5	P62079	268 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	NCS1	P62166	190 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	PAFAH1B2	P68402	229 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	ERH	P84090	104 aa	Known RBP	3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	USF2	Q15853	346 aa	Predicted RBP	3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	BSX	Q3C1V8	233 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	ACTL10	Q5JWF8	245 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	GDF5OS	Q5U4N7	250 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	LHFPL1	Q86WI0	220 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	OR4X1	Q8NH49	305 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	LHFPL5	Q8TAF8	219 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	TSC22D3	Q99576	134 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	ACTR3C	Q9C0K3	210 aa	Predicted RBP	3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	VCX3B	Q9H321	246 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956		Q9H3A6	140 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	COMMD3	Q9UBI1	195 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	DNAH17	Q9UFH2	4485 aa		3.47	□□□□□ -1.85
PSMC6-208	ENST00000554956	PKHD1	P08F94	4074 aa		3.46	□□□□□ -1.85
PSMC6-208	ENST00000554956	IGLV2-18	A0A075B6J9	118 aa		3.46	□□□□□ -1.86
PSMC6-208	ENST00000554956	DEFB131B	A0A096LNP1	70 aa		3.46	□□□□□ -1.86
PSMC6-208	ENST00000554956	TRAV10	A0A0B4J240	114 aa		3.46	□□□□□ -1.86
PSMC6-208	ENST00000554956	C11orf94	C9JXX5	98 aa		3.46	□□□□□ -1.86
PSMC6-208	ENST00000554956		H3BMM0	161 aa		3.46	□□□□□ -1.86
PSMC6-208	ENST00000554956	HPGDS	O60760	199 aa		3.46	□□□□□ -1.86
PSMC6-208	ENST00000554956	IFNA17	P01571	189 aa		3.46	□□□□□ -1.86
PSMC6-208	ENST00000554956	CD3D	P04234	171 aa		3.46	□□□□□ -1.86
PSMC6-208	ENST00000554956	PRM2	P04554	102 aa		3.46	□□□□□ -1.86
PSMC6-208	ENST00000554956	MIF	P14174	115 aa		3.46	□□□□□ -1.86

Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms