RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 UBQLN2Q9UHD9 624 aa5.98□□□□□ -1.45
LINC01397-201ENST00000554808 HLA-DRB4X5D2U9 266 aa5.98□□□□□ -1.45
LINC01397-201ENST00000554808 TRAV8-2A0A0B4J237 113 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 A0A0J9YX75 114 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 RBAKDNA6NC62 111 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 FBLL1A6NHQ2 334 aaKnown RBP5.97□□□□□ -1.45
LINC01397-201ENST00000554808 A8MTW9 85 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 ZNF705EA8MWA4 302 aaPredicted RBP5.97□□□□□ -1.45
LINC01397-201ENST00000554808 SLC17A3O00476 420 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 HMGB3O15347 200 aaKnown RBP5.97□□□□□ -1.45
LINC01397-201ENST00000554808 NDUFB4O95168 129 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 IFNA1P01562 189 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 AMBPP02760 352 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 FHITP49789 147 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 RANP62826 216 aaKnown RBP5.97□□□□□ -1.45
LINC01397-201ENST00000554808 PMS2P11Q13670 270 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 ICAM4Q14773 271 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 TEX261Q6UWH6 196 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 ALKAL2Q6UX46 152 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 SSX7Q7RTT5 188 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 IQCF2Q8IXL9 164 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 DEFB125Q8N687 156 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 C5orf17Q8NAS9 161 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 OR10J6PQ8NGY7 276 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 RPUSD4Q96CM3 377 aaKnown RBP5.97□□□□□ -1.45
LINC01397-201ENST00000554808 Q9H3A6 140 aa5.97□□□□□ -1.45
LINC01397-201ENST00000554808 TRBV7-9A0A0J9YWB2 115 aa5.96□□□□□ -1.46
LINC01397-201ENST00000554808 F6UZH7 168 aa5.96□□□□□ -1.46
LINC01397-201ENST00000554808 H3BMM0 161 aa5.96□□□□□ -1.46
LINC01397-201ENST00000554808 FGF8P55075 233 aaPredicted RBP5.96□□□□□ -1.46
LINC01397-201ENST00000554808 DEFB121Q5J5C9 76 aa5.96□□□□□ -1.46
LINC01397-201ENST00000554808 ACTL10Q5JWF8 245 aa5.96□□□□□ -1.46
LINC01397-201ENST00000554808 TRPT1Q86TN4 253 aaKnown RBP5.96□□□□□ -1.46
LINC01397-201ENST00000554808 APRG1Q8IVJ8 170 aa5.96□□□□□ -1.46
LINC01397-201ENST00000554808 RNF182Q8N6D2 247 aa5.96□□□□□ -1.46
LINC01397-201ENST00000554808 OR8A1Q8NGG7 326 aa5.96□□□□□ -1.46
LINC01397-201ENST00000554808 HIST1H2BAQ96A08 127 aa5.96□□□□□ -1.46
LINC01397-201ENST00000554808 ODF3Q96PU9 254 aa5.96□□□□□ -1.46
LINC01397-201ENST00000554808 BOLA1Q9Y3E2 137 aa5.96□□□□□ -1.46
LINC01397-201ENST00000554808 LENEPQ9Y5L5 61 aa5.96□□□□□ -1.46
LINC01397-201ENST00000554808 PGPA6NDG6 321 aa5.95□□□□□ -1.46
LINC01397-201ENST00000554808 FAM74A7A6NL05 159 aa5.95□□□□□ -1.46
LINC01397-201ENST00000554808 H3BTX0 84 aa5.95□□□□□ -1.46
LINC01397-201ENST00000554808 NDUFS6O75380 124 aaKnown RBP5.95□□□□□ -1.46
LINC01397-201ENST00000554808 FRMD6-AS1P0C7T7 363 aa5.95□□□□□ -1.46
LINC01397-201ENST00000554808 TSPOP30536 169 aa5.95□□□□□ -1.46
LINC01397-201ENST00000554808 TMEM78Q5T7P6 136 aa5.95□□□□□ -1.46
LINC01397-201ENST00000554808 LINC00322Q6ZN03 302 aaPredicted RBP5.95□□□□□ -1.46
LINC01397-201ENST00000554808 C9orf47Q6ZRZ4 202 aa5.95□□□□□ -1.46
LINC01397-201ENST00000554808 ZNF767PQ75MW2 155 aa5.95□□□□□ -1.46
LINC01397-201ENST00000554808 EXOC3-AS1Q8N2X6 119 aa5.95□□□□□ -1.46
LINC01397-201ENST00000554808 ZNF680Q8NEM1 530 aa5.95□□□□□ -1.46
LINC01397-201ENST00000554808 C20orf173Q96LM9 149 aa5.95□□□□□ -1.46
LINC01397-201ENST00000554808 LINC00477Q96M19 166 aa5.95□□□□□ -1.46
LINC01397-201ENST00000554808 B9D2Q9BPU9 175 aa5.95□□□□□ -1.46
LINC01397-201ENST00000554808 CSTL1Q9H114 145 aa5.95□□□□□ -1.46
LINC01397-201ENST00000554808 WFDC10AQ9H1F0 79 aa5.95□□□□□ -1.46
LINC01397-201ENST00000554808 PPP1R14DQ9NXH3 145 aa5.95□□□□□ -1.46
LINC01397-201ENST00000554808 PLA2G2EQ9NZK7 142 aa5.95□□□□□ -1.46
LINC01397-201ENST00000554808 TP53TG1Q9Y2A0 90 aa5.95□□□□□ -1.46
LINC01397-201ENST00000554808 DNAH9Q9NYC9 4486 aa5.94□□□□□ -1.46
LINC01397-201ENST00000554808 NBEAL2Q6ZNJ1 2754 aa5.94□□□□□ -1.46
LINC01397-201ENST00000554808 KNCNA6PVL3 124 aa5.94□□□□□ -1.46
LINC01397-201ENST00000554808 DIRC3C9JPN6 131 aa5.94□□□□□ -1.46
LINC01397-201ENST00000554808 NPIPB6E9PJ23 425 aa5.94□□□□□ -1.46
LINC01397-201ENST00000554808 PRB2P02812 416 aaPredicted RBP5.94□□□□□ -1.46
LINC01397-201ENST00000554808 NMBP08949 121 aa5.94□□□□□ -1.46
LINC01397-201ENST00000554808 SNRPCP09234 159 aaKnown RBP5.94□□□□□ -1.46
LINC01397-201ENST00000554808 NHLRC4P0CG21 123 aaPredicted RBP5.94□□□□□ -1.46
LINC01397-201ENST00000554808 CNN1P51911 297 aaKnown RBP5.94□□□□□ -1.46
LINC01397-201ENST00000554808 SUMO1P63165 101 aaKnown RBP5.94□□□□□ -1.46
LINC01397-201ENST00000554808 HIST1H1AQ02539 215 aaPredicted RBP5.94□□□□□ -1.46
LINC01397-201ENST00000554808 IGFL4Q6B9Z1 124 aa5.94□□□□□ -1.46
LINC01397-201ENST00000554808 Q6ZWC4 215 aa5.94□□□□□ -1.46
LINC01397-201ENST00000554808 CYB561D1Q8N8Q1 229 aa5.94□□□□□ -1.46
LINC01397-201ENST00000554808 OR4B1Q8NGF8 309 aa5.94□□□□□ -1.46
LINC01397-201ENST00000554808 LYPD6BQ8NI32 183 aa5.94□□□□□ -1.46
LINC01397-201ENST00000554808 CITED4Q96RK1 184 aa5.94□□□□□ -1.46
LINC01397-201ENST00000554808 C20orf144Q9BQM9 153 aa5.94□□□□□ -1.46
LINC01397-201ENST00000554808 ATG101Q9BSB4 218 aa5.94□□□□□ -1.46
LINC01397-201ENST00000554808 ZMAT4Q9H898 229 aa5.94□□□□□ -1.46
LINC01397-201ENST00000554808 RBMY1BA6NDE4 496 aaKnown RBP5.93□□□□□ -1.46
LINC01397-201ENST00000554808 RBMY1EA6NEQ0 496 aaKnown RBP5.93□□□□□ -1.46
LINC01397-201ENST00000554808 GGTLC3B5MD39 225 aa5.93□□□□□ -1.46
LINC01397-201ENST00000554808 M0R3E3 92 aa5.93□□□□□ -1.46
LINC01397-201ENST00000554808 PDE6DO43924 150 aa5.93□□□□□ -1.46
LINC01397-201ENST00000554808 TCRAP04437 139 aa5.93□□□□□ -1.46
LINC01397-201ENST00000554808 S100A9P06702 114 aaKnown RBP5.93□□□□□ -1.46
LINC01397-201ENST00000554808 RBMY1DP0C7P1 496 aaKnown RBP5.93□□□□□ -1.46
LINC01397-201ENST00000554808 HLA-DMBP28068 263 aa5.93□□□□□ -1.46
LINC01397-201ENST00000554808 LEPP41159 167 aa5.93□□□□□ -1.46
LINC01397-201ENST00000554808 CDKN1BP46527 198 aa5.93□□□□□ -1.46
LINC01397-201ENST00000554808 UBE2G2P60604 165 aa5.93□□□□□ -1.46
LINC01397-201ENST00000554808 RAB14P61106 215 aa5.93□□□□□ -1.46
LINC01397-201ENST00000554808 MEF2BQ02080 365 aaPredicted RBP5.93□□□□□ -1.46
LINC01397-201ENST00000554808 CST9LP1Q5W188 147 aa5.93□□□□□ -1.46
LINC01397-201ENST00000554808 TMEM75Q8N9X5 138 aa5.93□□□□□ -1.46
LINC01397-201ENST00000554808 SPATA25Q9BR10 227 aa5.93□□□□□ -1.46
LINC01397-201ENST00000554808 NDFIP1Q9BT67 221 aa5.93□□□□□ -1.46
LINC01397-201ENST00000554808 TMPRSS5Q9H3S3 457 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms