RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 TIMM9Q9Y5J7 89 aa7.67□□□□□ -1.18
SHMT2-213ENST00000554600 ALMS1Q8TCU4 4167 aa7.67□□□□□ -1.18
SHMT2-213ENST00000554600 HYDINQ4G0P3 5121 aa7.66□□□□□ -1.18
SHMT2-213ENST00000554600 ZNF705GA8MUZ8 300 aaPredicted RBP7.66□□□□□ -1.18
SHMT2-213ENST00000554600 PYYP10082 97 aa7.66□□□□□ -1.18
SHMT2-213ENST00000554600 C12orf74Q32Q52 190 aa7.66□□□□□ -1.18
SHMT2-213ENST00000554600 ZNF586Q9NXT0 402 aa7.66□□□□□ -1.18
SHMT2-213ENST00000554600 DEFB131BA0A096LNP1 70 aa7.65□□□□□ -1.18
SHMT2-213ENST00000554600 PRAC2D3DTV9 90 aa7.65□□□□□ -1.18
SHMT2-213ENST00000554600 J3KRW8 73 aa7.65□□□□□ -1.18
SHMT2-213ENST00000554600 HIST1H1EP10412 219 aaKnown RBP7.65□□□□□ -1.18
SHMT2-213ENST00000554600 HTN1P15515 57 aa7.65□□□□□ -1.18
SHMT2-213ENST00000554600 RYR1P21817 5038 aa7.65□□□□□ -1.18
SHMT2-213ENST00000554600 TSPOP30536 169 aa7.65□□□□□ -1.18
SHMT2-213ENST00000554600 OXA1LQ15070 435 aa7.65□□□□□ -1.18
SHMT2-213ENST00000554600 FFAR4Q5NUL3 377 aa7.65□□□□□ -1.18
SHMT2-213ENST00000554600 FAM222AQ5U5X8 452 aa7.65□□□□□ -1.18
SHMT2-213ENST00000554600 MIR17HGQ75NE6 70 aa7.65□□□□□ -1.18
SHMT2-213ENST00000554600 RPP25LQ8N5L8 163 aaKnown RBP7.65□□□□□ -1.18
SHMT2-213ENST00000554600 ASB13Q8WXK3 278 aa7.65□□□□□ -1.18
SHMT2-213ENST00000554600 SAT2Q96F10 170 aaPredicted RBP7.65□□□□□ -1.18
SHMT2-213ENST00000554600 LINC01587Q99440 93 aa7.65□□□□□ -1.18
SHMT2-213ENST00000554600 SLC25A2Q9BXI2 301 aa7.65□□□□□ -1.18
SHMT2-213ENST00000554600 PARD6GQ9BYG4 376 aaPredicted RBP7.65□□□□□ -1.18
SHMT2-213ENST00000554600 AAMDCQ9H7C9 122 aa7.65□□□□□ -1.18
SHMT2-213ENST00000554600 TMEM14CQ9P0S9 112 aa7.65□□□□□ -1.18
SHMT2-213ENST00000554600 YTHDF2Q9Y5A9 579 aaKnown RBP7.65□□□□□ -1.18
SHMT2-213ENST00000554600 TRBV19A0A075B6N1 114 aa7.64□□□□□ -1.19
SHMT2-213ENST00000554600 TEX48A0A1B0GUV7 120 aa7.64□□□□□ -1.19
SHMT2-213ENST00000554600 CRXO43186 299 aaPredicted RBP7.64□□□□□ -1.19
SHMT2-213ENST00000554600 OR7C2O60412 319 aa7.64□□□□□ -1.19
SHMT2-213ENST00000554600 GIPP09681 153 aaPredicted RBP7.64□□□□□ -1.19
SHMT2-213ENST00000554600 OR10J4P0C629 311 aa7.64□□□□□ -1.19
SHMT2-213ENST00000554600 HTN3P15516 51 aa7.64□□□□□ -1.19
SHMT2-213ENST00000554600 CDKN1BP46527 198 aa7.64□□□□□ -1.19
SHMT2-213ENST00000554600 NIPSNAP3BQ9BS92 247 aa7.64□□□□□ -1.19
SHMT2-213ENST00000554600 PAXXQ9BUH6 204 aa7.64□□□□□ -1.19
SHMT2-213ENST00000554600 MRPL32Q9BYC8 188 aaKnown RBP7.64□□□□□ -1.19
SHMT2-213ENST00000554600 OR51M1Q9H341 326 aa7.64□□□□□ -1.19
SHMT2-213ENST00000554600 PLA2G2EQ9NZK7 142 aa7.64□□□□□ -1.19
SHMT2-213ENST00000554600 DKK2Q9UBU2 259 aa7.64□□□□□ -1.19
SHMT2-213ENST00000554600 NACAE9PAV3 2078 aa7.64□□□□□ -1.19
SHMT2-213ENST00000554600 IGHV4-4A0A075B6R2 117 aa7.63□□□□□ -1.19
SHMT2-213ENST00000554600 M0R3E3 92 aa7.63□□□□□ -1.19
SHMT2-213ENST00000554600 ZNF253O75346 499 aa7.63□□□□□ -1.19
SHMT2-213ENST00000554600 PRM2P04554 102 aa7.63□□□□□ -1.19
SHMT2-213ENST00000554600 NBEAP1P0C6P0 100 aa7.63□□□□□ -1.19
SHMT2-213ENST00000554600 TCTAP57738 103 aa7.63□□□□□ -1.19
SHMT2-213ENST00000554600 DAD1P61803 113 aa7.63□□□□□ -1.19
SHMT2-213ENST00000554600 TMEM256Q8N2U0 113 aa7.63□□□□□ -1.19
SHMT2-213ENST00000554600 EXOC3-AS1Q8N2X6 119 aa7.63□□□□□ -1.19
SHMT2-213ENST00000554600 FUT9Q9Y231 359 aa7.63□□□□□ -1.19
SHMT2-213ENST00000554600 PRELID1Q9Y255 219 aa7.63□□□□□ -1.19
SHMT2-213ENST00000554600 PLECQ15149 4684 aaKnown RBP7.62□□□□□ -1.19
SHMT2-213ENST00000554600 NDUFB4O95168 129 aa7.62□□□□□ -1.19
SHMT2-213ENST00000554600 LEPP41159 167 aa7.62□□□□□ -1.19
SHMT2-213ENST00000554600 ERCC8Q13216 396 aa7.62□□□□□ -1.19
SHMT2-213ENST00000554600 PDE6HQ13956 83 aa7.62□□□□□ -1.19
SHMT2-213ENST00000554600 ICAM4Q14773 271 aa7.62□□□□□ -1.19
SHMT2-213ENST00000554600 KIR3DS1Q14943 382 aa7.62□□□□□ -1.19
SHMT2-213ENST00000554600 LGALS9CQ6DKI2 356 aa7.62□□□□□ -1.19
SHMT2-213ENST00000554600 FAM122CQ6P4D5 195 aa7.62□□□□□ -1.19
SHMT2-213ENST00000554600 FAM167A-AS1Q96KT0 104 aa7.62□□□□□ -1.19
SHMT2-213ENST00000554600 WFDC1Q9HC57 220 aa7.62□□□□□ -1.19
SHMT2-213ENST00000554600 APLNQ9ULZ1 77 aa7.62□□□□□ -1.19
SHMT2-213ENST00000554600 HERC2O95714 4834 aa7.61□□□□□ -1.19
SHMT2-213ENST00000554600 NPIPB6E9PJ23 425 aa7.61□□□□□ -1.19
SHMT2-213ENST00000554600 EIF3GO75821 320 aaKnown RBP eCLIP7.61□□□□□ -1.19
SHMT2-213ENST00000554600 CT45A10P0DMU9 189 aa7.61□□□□□ -1.19
SHMT2-213ENST00000554600 DEFB130BP0DP73 79 aa7.61□□□□□ -1.19
SHMT2-213ENST00000554600 DEFB130AP0DP74 79 aa7.61□□□□□ -1.19
SHMT2-213ENST00000554600 AZU1P20160 251 aa7.61□□□□□ -1.19
SHMT2-213ENST00000554600 TAS2R45P59539 299 aa7.61□□□□□ -1.19
SHMT2-213ENST00000554600 TAS2R60P59551 318 aa7.61□□□□□ -1.19
SHMT2-213ENST00000554600 UBE2L3P68036 154 aaKnown RBP7.61□□□□□ -1.19
SHMT2-213ENST00000554600 ACOT6Q3I5F7 207 aaPredicted RBP7.61□□□□□ -1.19
SHMT2-213ENST00000554600 KHDC3LQ587J8 217 aa7.61□□□□□ -1.19
SHMT2-213ENST00000554600 GFI1BQ5VTD9 330 aa7.61□□□□□ -1.19
SHMT2-213ENST00000554600 RNF141Q8WVD5 230 aa7.61□□□□□ -1.19
SHMT2-213ENST00000554600 MRPL53Q96EL3 112 aaKnown RBP7.61□□□□□ -1.19
SHMT2-213ENST00000554600 NDUFAF3Q9BU61 184 aa7.61□□□□□ -1.19
SHMT2-213ENST00000554600 IGKV2-40A0A087WW87 121 aaPredicted RBP7.6□□□□□ -1.19
SHMT2-213ENST00000554600 FXYD6-FXYD2A0A087WZ82 144 aa7.6□□□□□ -1.19
SHMT2-213ENST00000554600 TRAV12-3A0A0B4J271 114 aa7.6□□□□□ -1.19
SHMT2-213ENST00000554600 A0A1W2PPV4 95 aa7.6□□□□□ -1.19
SHMT2-213ENST00000554600 H7BYZ3 331 aa7.6□□□□□ -1.19
SHMT2-213ENST00000554600 IGKV2D-40P01614 121 aaPredicted RBP7.6□□□□□ -1.19
SHMT2-213ENST00000554600 CSN1S1P47710 185 aa7.6□□□□□ -1.19
SHMT2-213ENST00000554600 RANP62826 216 aaKnown RBP7.6□□□□□ -1.19
SHMT2-213ENST00000554600 TMEM78Q5T7P6 136 aa7.6□□□□□ -1.19
SHMT2-213ENST00000554600 CCDC28AQ8IWP9 274 aa7.6□□□□□ -1.19
SHMT2-213ENST00000554600 HSD17B11Q8NBQ5 300 aa7.6□□□□□ -1.19
SHMT2-213ENST00000554600 INO80EQ8NBZ0 244 aaPredicted RBP7.6□□□□□ -1.19
SHMT2-213ENST00000554600 OR2T35Q8NGX2 323 aa7.6□□□□□ -1.19
SHMT2-213ENST00000554600 FXYD5Q96DB9 178 aa7.6□□□□□ -1.19
SHMT2-213ENST00000554600 PHYHIPLQ96FC7 376 aa7.6□□□□□ -1.19
SHMT2-213ENST00000554600 LYRM9A8MSI8 78 aa7.59□□□□□ -1.19
SHMT2-213ENST00000554600 RAB2AP61019 212 aa7.59□□□□□ -1.19
SHMT2-213ENST00000554600 ZNF266Q14584 549 aa7.59□□□□□ -1.19
SHMT2-213ENST00000554600 Q5BKY6 102 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms