RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 CCL19Q99731 98 aa3.97□□□□□ -1.77
MTHFD1-206ENST00000554353 C20orf144Q9BQM9 153 aa3.97□□□□□ -1.77
MTHFD1-206ENST00000554353 UFC1Q9Y3C8 167 aa3.97□□□□□ -1.77
MTHFD1-206ENST00000554353 TIMM9Q9Y5J7 89 aa3.97□□□□□ -1.77
MTHFD1-206ENST00000554353 DOCK11Q5JSL3 2073 aa3.97□□□□□ -1.77
MTHFD1-206ENST00000554353 PLCE1Q9P212 2302 aa3.96□□□□□ -1.77
MTHFD1-206ENST00000554353 DYSFO75923 2080 aa3.96□□□□□ -1.77
MTHFD1-206ENST00000554353 IGHV3OR15-7A0A075B7D8 119 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 A0A087WWC5 75 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 ZNF727A8MUV8 499 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 C1orf196B1AJZ1 125 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 F6UB75 175 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 K7EMT4 169 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 YPEL1O60688 119 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 IFNA4P05014 189 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 OR10J4P0C629 311 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 BCL2P10415 239 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 GZMHP20718 246 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 USF1P22415 310 aaPredicted RBP3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 GLRXP35754 106 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 UBE2E1P51965 193 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 GNB2P62879 340 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 HBG1P69891 147 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 HBG2P69892 147 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 MRPS11P82912 194 aaKnown RBP3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 CATR1Q13166 79 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 C17orf58Q2M2W7 97 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 C1orf195Q5TG92 126 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 HEPN1Q6WQI6 88 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 FAM231DQ6ZW35 169 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 ZNF429Q86V71 674 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 RPP25LQ8N5L8 163 aaKnown RBP3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 FAM24BQ8N5W8 94 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 Q8N7P7 452 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 OR13C6PQ8NH95 151 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 SPATA3Q8NHX4 192 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 ITLN1Q8WWA0 313 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 UBE2E2Q96LR5 201 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 YPEL2Q96QA6 119 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 HSD17B10Q99714 261 aaKnown RBP3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 IFI27L2Q9H2X8 130 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 ENY2Q9NPA8 101 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 PRO0628Q9UI54 55 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 JPT1Q9UK76 154 aa3.96□□□□□ -1.78
MTHFD1-206ENST00000554353 UBE2L5PA0A1B0GUS4 154 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 MAP1LC3B2A6NCE7 125 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 LINC00587B1AMM8 73 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 RBFOX2O43251 390 aaKnown RBP eCLIP3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 IGHV1-46P01743 117 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 CXCL1P09341 107 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 S100PP25815 95 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 RPL35P42766 123 aaKnown RBP3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 VDAC2P45880 294 aaPredicted RBP3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 KLF3P57682 345 aaPredicted RBP3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 RAB5BP61020 215 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 PRSS8Q16651 343 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 C14orf177Q52M58 125 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 FAM201AQ5SY85 155 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 ZC2HC1BQ5TFG8 222 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 FAM78BQ5VT40 261 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 LCN15Q6UWW0 184 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 Q6ZN92 141 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 TCF23Q7RTU1 214 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 SLC35E3Q7Z769 313 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 SMIM20Q8N5G0 67 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 ZNRF1Q8ND25 227 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 ZNF439Q8NDP4 499 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 TVP23CQ96ET8 276 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 LINC00479Q96M42 142 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 TMEM147Q9BVK8 224 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 KRTAP2-2Q9BYT5 123 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 MAP1LC3BQ9GZQ8 125 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 LINC00574Q9H8X3 128 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 CALYQ9NYX4 217 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 DOK5Q9P104 306 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 GNG13Q9P2W3 67 aa3.95□□□□□ -1.78
MTHFD1-206ENST00000554353 TRAV3A0A0B4J244 114 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 LOC100131303A0A0U1RQF7 123 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 CTXND1A0A1B0GTU2 59 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 ZFP92A6NM28 416 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 B4DEV8 164 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 K7EQD1 137 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 RBMY1CP0DJD4 496 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 FGF7P21781 194 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 GPX4P36969 197 aaPredicted RBP3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 RND2P52198 227 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 NUTF2P61970 127 aaKnown RBP3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 SMAGPQ0VAQ4 97 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 ELOBQ15370 118 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 LTC4SQ16873 150 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 RPL39P5Q59GN2 51 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 SPINK9Q5DT21 86 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 ZNF343Q6P1L6 599 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 OR10P1Q8NGE3 313 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 PIFOQ8TCI5 191 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 GAFA1Q96PS6 74 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 CIB3Q96Q77 187 aaPredicted RBP3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 NPCDR1Q9BY65 106 aa3.94□□□□□ -1.78
MTHFD1-206ENST00000554353 SLC39A9Q9NUM3 307 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms