RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 TEX36Q5VZQ5 186 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 SPATA31B1PQ5VZV4 182 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 PVRIGQ6DKI7 326 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 SLC25A34Q6PIV7 304 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 CLEC2AQ6UVW9 174 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 RBPMS2Q6ZRY4 209 aaKnown RBP4.69□□□□□ -1.66
VPS33B-203ENST00000554264 ZNF329Q86UD4 541 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 LYPD1Q8N2G4 141 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 ZCCHC24Q8N2G6 241 aaKnown RBP4.69□□□□□ -1.66
VPS33B-203ENST00000554264 GATD1Q8NB37 220 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 NUP35Q8NFH5 326 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 OR4C5Q8NGB2 326 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 TNFRSF14Q92956 283 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 FAM167A-AS1Q96KT0 104 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 RCHY1Q96PM5 261 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 TRGV9Q99603 122 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 SLC25A2Q9BXI2 301 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 PRSS22Q9GZN4 317 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 TMEM14CQ9P0S9 112 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 EPDR1Q9UM22 224 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 SLC25A15Q9Y619 301 aa4.69□□□□□ -1.66
VPS33B-203ENST00000554264 ANK3Q12955 4377 aaKnown RBP4.69□□□□□ -1.66
VPS33B-203ENST00000554264 A0A096LNT2 108 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 TRAV3A0A0B4J244 114 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 C2orf70A6NJV1 201 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 HIGD1CA8MV81 97 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 K7ERU9 68 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 CHEK1O14757 476 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 FOXH1O75593 365 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 LEPROTL1O95214 131 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 LTAP01374 205 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 SAA1P0DJI8 122 aaPredicted RBP4.68□□□□□ -1.66
VPS33B-203ENST00000554264 CEACAM3P40198 252 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 CSN1S1P47710 185 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 ZNF137PP52743 207 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 FOXA3P55318 350 aaPredicted RBP4.68□□□□□ -1.66
VPS33B-203ENST00000554264 SLAQ13239 276 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 RIGQ13278 110 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 FXYD3Q14802 87 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 TNXAQ16473 311 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 TDRG1Q3Y452 100 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 CCDC144NLQ6NUI1 221 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 RNASEKQ6P5S7 137 aaKnown RBP4.68□□□□□ -1.66
VPS33B-203ENST00000554264 VKORC1L1Q8N0U8 176 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 TPRX1Q8N7U7 411 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 STPG4Q8N801 248 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 TEX45Q8NA69 505 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 NUP37Q8NFH4 326 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 OR1N2Q8NGR9 330 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 FLYWCH2Q96CP2 140 aaKnown RBP4.68□□□□□ -1.66
VPS33B-203ENST00000554264 FXYD5Q96DB9 178 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 HARBI1Q96MB7 349 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 HINT2Q9BX68 163 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 CLEC7AQ9BXN2 247 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 NPFFR1Q9GZQ6 430 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 OTORQ9NRC9 128 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 ZNF355PQ9NSJ1 428 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 PEF1Q9UBV8 284 aaKnown RBP4.68□□□□□ -1.66
VPS33B-203ENST00000554264 WASHC3Q9Y3C0 194 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 TNFRSF18Q9Y5U5 241 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 CR1P17927 2039 aa4.68□□□□□ -1.66
VPS33B-203ENST00000554264 ROS1P08922 2347 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 IGKV1OR2-108A0A075B7D4 117 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.67□□□□□ -1.66
VPS33B-203ENST00000554264 C19orf71A6NCJ1 209 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 A6NDN8 102 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 OR4C46A6NHA9 309 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 F2Z2F3 143 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 SYS1-DBNDD2H3BUS1 97 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 PRYO14603 147 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 SIVA1O15304 175 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 NDUFS7O75251 213 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 SCGB2A1O75556 95 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 SLC25A5P05141 298 aaKnown RBP4.67□□□□□ -1.66
VPS33B-203ENST00000554264 CRYGCP07315 174 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 IGHV4-31P0DP07 118 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 TCL1AP56279 114 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 ARF6P62330 175 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 TNFAIP6P98066 277 aaPredicted RBP4.67□□□□□ -1.66
VPS33B-203ENST00000554264 LTC4SQ16873 150 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 GTF2H5Q6ZYL4 71 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 MOGAT3Q86VF5 341 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 DEFB125Q8N687 156 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 TMEM116Q8NCL8 245 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 OR4F17Q8NGA8 305 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 OR9G4Q8NGQ1 327 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 GAFA1Q96PS6 74 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 RNF5Q99942 180 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 DYSFO75923 2080 aa4.67□□□□□ -1.66
VPS33B-203ENST00000554264 CUBNO60494 3623 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 LOC102724200A0A096LPH7 203 aaPredicted RBP4.66□□□□□ -1.66
VPS33B-203ENST00000554264 SRRM4A7MD48 611 aaKnown RBP4.66□□□□□ -1.66
VPS33B-203ENST00000554264 SHISA9B4DS77 424 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 NDUFB8O95169 186 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 TCRAP04437 139 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 NBEAP1P0C6P0 100 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 IGLL1P15814 213 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 BSPH1Q075Z2 132 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 PLGLAQ15195 96 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 VAMP3Q15836 100 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms