RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 POLR2GP62487 172 aaKnown RBP eCLIP9.64□□□□□ -0.87
NEDD1-205ENST00000553609 ICAM4Q14773 271 aa9.64□□□□□ -0.87
NEDD1-205ENST00000553609 C4orf46Q504U0 113 aa9.64□□□□□ -0.87
NEDD1-205ENST00000553609 MORN5Q5VZ52 161 aa9.64□□□□□ -0.87
NEDD1-205ENST00000553609 TEPPQ6URK8 271 aa9.64□□□□□ -0.87
NEDD1-205ENST00000553609 CCDC190Q86UF4 302 aa9.64□□□□□ -0.87
NEDD1-205ENST00000553609 DYNC2LI1Q8TCX1 351 aa9.64□□□□□ -0.87
NEDD1-205ENST00000553609 ZNF431Q8TF32 576 aaPredicted RBP9.64□□□□□ -0.87
NEDD1-205ENST00000553609 ODF3Q96PU9 254 aa9.64□□□□□ -0.87
NEDD1-205ENST00000553609 PYGO2Q9BRQ0 406 aa9.64□□□□□ -0.87
NEDD1-205ENST00000553609 GSN-AS1Q9NRJ2 163 aa9.64□□□□□ -0.87
NEDD1-205ENST00000553609 RSL24D1Q9UHA3 163 aaKnown RBP9.64□□□□□ -0.87
NEDD1-205ENST00000553609 NPIPB6E9PJ23 425 aa9.63□□□□□ -0.87
NEDD1-205ENST00000553609 J3KRW8 73 aa9.63□□□□□ -0.87
NEDD1-205ENST00000553609 ANXA7P20073 488 aaKnown RBP9.63□□□□□ -0.87
NEDD1-205ENST00000553609 RRAS2P62070 204 aaPredicted RBP9.63□□□□□ -0.87
NEDD1-205ENST00000553609 SLC38A11Q08AI6 406 aa9.63□□□□□ -0.87
NEDD1-205ENST00000553609 SAT2Q96F10 170 aaPredicted RBP9.63□□□□□ -0.87
NEDD1-205ENST00000553609 CCDC59Q9P031 241 aaKnown RBP9.63□□□□□ -0.87
NEDD1-205ENST00000553609 TRGV2A0A075B6R0 118 aa9.62□□□□□ -0.87
NEDD1-205ENST00000553609 FNDC10F2Z333 226 aa9.62□□□□□ -0.87
NEDD1-205ENST00000553609 H3BQ15 152 aa9.62□□□□□ -0.87
NEDD1-205ENST00000553609 HAMPP81172 84 aa9.62□□□□□ -0.87
NEDD1-205ENST00000553609 TMEM14EPQ6UXP3 125 aa9.62□□□□□ -0.87
NEDD1-205ENST00000553609 LINC00305Q7Z4B0 112 aa9.62□□□□□ -0.87
NEDD1-205ENST00000553609 TMEM37Q8WXS4 190 aa9.62□□□□□ -0.87
NEDD1-205ENST00000553609 PSENENQ9NZ42 101 aa9.62□□□□□ -0.87
NEDD1-205ENST00000553609 ZNF324O75467 553 aaPredicted RBP9.61□□□□□ -0.87
NEDD1-205ENST00000553609 TNFSF8P32971 234 aa9.61□□□□□ -0.87
NEDD1-205ENST00000553609 LEPP41159 167 aa9.61□□□□□ -0.87
NEDD1-205ENST00000553609 PXDC1Q5TGL8 231 aa9.61□□□□□ -0.87
NEDD1-205ENST00000553609 S100A7AQ86SG5 101 aa9.61□□□□□ -0.87
NEDD1-205ENST00000553609 NFE4Q86UQ8 179 aa9.61□□□□□ -0.87
NEDD1-205ENST00000553609 BPIFA4PQ86YQ2 179 aa9.61□□□□□ -0.87
NEDD1-205ENST00000553609 LINC00467Q9BRT7 94 aa9.61□□□□□ -0.87
NEDD1-205ENST00000553609 SLIRPQ9GZT3 109 aaKnown RBP9.61□□□□□ -0.87
NEDD1-205ENST00000553609 NPVFQ9HCQ7 196 aa9.61□□□□□ -0.87
NEDD1-205ENST00000553609 RNF24Q9Y225 148 aa9.61□□□□□ -0.87
NEDD1-205ENST00000553609 FUT9Q9Y231 359 aa9.61□□□□□ -0.87
NEDD1-205ENST00000553609 KLF12Q9Y4X4 402 aa9.61□□□□□ -0.87
NEDD1-205ENST00000553609 PXMP4Q9Y6I8 212 aa9.61□□□□□ -0.87
NEDD1-205ENST00000553609 TRGV1A0A0A0MS02 117 aa9.6□□□□□ -0.87
NEDD1-205ENST00000553609 SSSCA1O60232 199 aa9.6□□□□□ -0.87
NEDD1-205ENST00000553609 SPINK4O60575 86 aa9.6□□□□□ -0.87
NEDD1-205ENST00000553609 IFNA5P01569 189 aa9.6□□□□□ -0.87
NEDD1-205ENST00000553609 METTL15P1P0C7V9 234 aa9.6□□□□□ -0.87
NEDD1-205ENST00000553609 ARL16Q0P5N6 197 aa9.6□□□□□ -0.87
NEDD1-205ENST00000553609 OPCMLQ14982 345 aa9.6□□□□□ -0.87
NEDD1-205ENST00000553609 ZNF680Q8NEM1 530 aa9.6□□□□□ -0.87
NEDD1-205ENST00000553609 SMIM8Q96KF7 97 aa9.6□□□□□ -0.87
NEDD1-205ENST00000553609 FAM19A4Q96LR4 140 aa9.6□□□□□ -0.87
NEDD1-205ENST00000553609 SLC25A21Q9BQT8 299 aaPredicted RBP9.6□□□□□ -0.87
NEDD1-205ENST00000553609 ICOSQ9Y6W8 199 aa9.6□□□□□ -0.87
NEDD1-205ENST00000553609 UBR4Q5T4S7 5183 aa9.59□□□□□ -0.87
NEDD1-205ENST00000553609 C7orf71A4D174 169 aa9.59□□□□□ -0.87
NEDD1-205ENST00000553609 FABP12A6NFH5 140 aa9.59□□□□□ -0.87
NEDD1-205ENST00000553609 KLLNB2CW77 178 aa9.59□□□□□ -0.87
NEDD1-205ENST00000553609 AGPAT2O15120 278 aa9.59□□□□□ -0.87
NEDD1-205ENST00000553609 PAX4O43316 350 aa9.59□□□□□ -0.87
NEDD1-205ENST00000553609 GCSHP23434 173 aa9.59□□□□□ -0.87
NEDD1-205ENST00000553609 FAUP35544 74 aaKnown RBP9.59□□□□□ -0.87
NEDD1-205ENST00000553609 TCL1AP56279 114 aa9.59□□□□□ -0.87
NEDD1-205ENST00000553609 ANXA2RQ3ZCQ2 193 aa9.59□□□□□ -0.87
NEDD1-205ENST00000553609 LYPD5Q6UWN5 251 aa9.59□□□□□ -0.87
NEDD1-205ENST00000553609 Q6ZSN1 163 aa9.59□□□□□ -0.87
NEDD1-205ENST00000553609 ZNF546Q86UE3 836 aa9.59□□□□□ -0.87
NEDD1-205ENST00000553609 ST6GAL2Q96JF0 529 aa9.59□□□□□ -0.87
NEDD1-205ENST00000553609 LRP1Q07954 4544 aaKnown RBP9.59□□□□□ -0.87
NEDD1-205ENST00000553609 SLC25A5P05141 298 aaKnown RBP9.58□□□□□ -0.88
NEDD1-205ENST00000553609 CRYBA4P53673 196 aa9.58□□□□□ -0.88
NEDD1-205ENST00000553609 CD300CQ08708 224 aa9.58□□□□□ -0.88
NEDD1-205ENST00000553609 MCFD2Q8NI22 146 aa9.58□□□□□ -0.88
NEDD1-205ENST00000553609 MGST2Q99735 147 aa9.58□□□□□ -0.88
NEDD1-205ENST00000553609 FAM229AH3BQW9 127 aa9.57□□□□□ -0.88
NEDD1-205ENST00000553609 M0R3E3 92 aa9.57□□□□□ -0.88
NEDD1-205ENST00000553609 GOSR2O14653 212 aa9.57□□□□□ -0.88
NEDD1-205ENST00000553609 COX7A2P2O60397 106 aa9.57□□□□□ -0.88
NEDD1-205ENST00000553609 IGHV3-53P01767 116 aa9.57□□□□□ -0.88
NEDD1-205ENST00000553609 BTN1A1Q13410 526 aa9.57□□□□□ -0.88
NEDD1-205ENST00000553609 FHL2Q14192 279 aa9.57□□□□□ -0.88
NEDD1-205ENST00000553609 LCE2CQ5TA81 110 aa9.57□□□□□ -0.88
NEDD1-205ENST00000553609 WFDC10BQ8IUB3 73 aa9.57□□□□□ -0.88
NEDD1-205ENST00000553609 TOMM5Q8N4H5 51 aa9.57□□□□□ -0.88
NEDD1-205ENST00000553609 EIF4E3Q8N5X7 224 aaKnown RBP9.57□□□□□ -0.88
NEDD1-205ENST00000553609 OR10P1Q8NGE3 313 aa9.57□□□□□ -0.88
NEDD1-205ENST00000553609 VGLL1Q99990 258 aa9.57□□□□□ -0.88
NEDD1-205ENST00000553609 TMEM70Q9BUB7 260 aa9.57□□□□□ -0.88
NEDD1-205ENST00000553609 MSRB1Q9NZV6 116 aa9.57□□□□□ -0.88
NEDD1-205ENST00000553609 MGAT4CQ9UBM8 478 aa9.57□□□□□ -0.88
NEDD1-205ENST00000553609 PRO0255Q9UI72 69 aa9.57□□□□□ -0.88
NEDD1-205ENST00000553609 RCL1Q9Y2P8 373 aaKnown RBP9.57□□□□□ -0.88
NEDD1-205ENST00000553609 TRAV5A0A0B4J249 113 aa9.56□□□□□ -0.88
NEDD1-205ENST00000553609 C9orf170A2RU37 121 aa9.56□□□□□ -0.88
NEDD1-205ENST00000553609 TSC22D2O75157 780 aa9.56□□□□□ -0.88
NEDD1-205ENST00000553609 AP3S2P59780 193 aa9.56□□□□□ -0.88
NEDD1-205ENST00000553609 UBE2MP61081 183 aaKnown RBP9.56□□□□□ -0.88
NEDD1-205ENST00000553609 ERCC8Q13216 396 aa9.56□□□□□ -0.88
NEDD1-205ENST00000553609 LINC01559Q495D7 138 aa9.56□□□□□ -0.88
NEDD1-205ENST00000553609 IBA57Q5T440 356 aaKnown RBP9.56□□□□□ -0.88
NEDD1-205ENST00000553609 RAB2BQ8WUD1 216 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms