RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 ZNF705EA8MWA4 302 aaPredicted RBP16.55■□□□□ 0.24
TDP1-206ENST00000553569 M0R2Z0 102 aa16.55■□□□□ 0.24
TDP1-206ENST00000553569 M0R3E3 92 aa16.55■□□□□ 0.24
TDP1-206ENST00000553569 OR10J6PQ8NGY7 276 aa16.55■□□□□ 0.24
TDP1-206ENST00000553569 AAMDCQ9H7C9 122 aa16.55■□□□□ 0.24
TDP1-206ENST00000553569 hCG_2014768A0A024R1R8 64 aa16.54■□□□□ 0.24
TDP1-206ENST00000553569 IGHV4-28A0A0C4DH34 117 aa16.54■□□□□ 0.24
TDP1-206ENST00000553569 BOLA2-SMG1P6H3BVE0 249 aa16.54■□□□□ 0.24
TDP1-206ENST00000553569 HMGB3O15347 200 aaKnown RBP16.54■□□□□ 0.24
TDP1-206ENST00000553569 Q8NAQ8 132 aa16.54■□□□□ 0.24
TDP1-206ENST00000553569 IL17DQ8TAD2 202 aa16.54■□□□□ 0.24
TDP1-206ENST00000553569 GNPNAT1Q96EK6 184 aaPredicted RBP16.54■□□□□ 0.24
TDP1-206ENST00000553569 PHYHIPLQ96FC7 376 aa16.54■□□□□ 0.24
TDP1-206ENST00000553569 C11orf68Q9H3H3 251 aaKnown RBP16.54■□□□□ 0.24
TDP1-206ENST00000553569 TAAR5O14804 337 aa16.53■□□□□ 0.24
TDP1-206ENST00000553569 MIFP14174 115 aa16.53■□□□□ 0.24
TDP1-206ENST00000553569 CDC34P49427 236 aaPredicted RBP16.53■□□□□ 0.24
TDP1-206ENST00000553569 ICAM4Q14773 271 aa16.53■□□□□ 0.24
TDP1-206ENST00000553569 MRPL53Q96EL3 112 aaKnown RBP16.53■□□□□ 0.24
TDP1-206ENST00000553569 PRELID1Q9Y255 219 aa16.53■□□□□ 0.24
TDP1-206ENST00000553569 SERF2P84101 59 aa16.52■□□□□ 0.24
TDP1-206ENST00000553569 CASC10Q5T4H9 136 aa16.52■□□□□ 0.24
TDP1-206ENST00000553569 BAP18Q8IXM2 172 aa16.52■□□□□ 0.24
TDP1-206ENST00000553569 KCNRGQ8N5I3 272 aa16.52■□□□□ 0.24
TDP1-206ENST00000553569 ST6GAL2Q96JF0 529 aa16.52■□□□□ 0.24
TDP1-206ENST00000553569 CYTL1Q9NRR1 136 aa16.52■□□□□ 0.24
TDP1-206ENST00000553569 GOLT1BQ9Y3E0 138 aa16.52■□□□□ 0.24
TDP1-206ENST00000553569 DNAH7Q8WXX0 4024 aa16.52■□□□□ 0.24
TDP1-206ENST00000553569 TRAV12-2A0A075B6T6 113 aa16.51■□□□□ 0.23
TDP1-206ENST00000553569 HMSDA8MTL9 139 aa16.51■□□□□ 0.23
TDP1-206ENST00000553569 JTBO76095 146 aa16.51■□□□□ 0.23
TDP1-206ENST00000553569 MBP02144 154 aa16.51■□□□□ 0.23
TDP1-206ENST00000553569 AMBPP02760 352 aa16.51■□□□□ 0.23
TDP1-206ENST00000553569 PMS2P11Q13670 270 aa16.51■□□□□ 0.23
TDP1-206ENST00000553569 ZNF345Q14585 488 aa16.51■□□□□ 0.23
TDP1-206ENST00000553569 ZNF705AQ6ZN79 300 aaPredicted RBP16.51■□□□□ 0.23
TDP1-206ENST00000553569 IGF2BP2-AS1Q96M15 143 aa16.51■□□□□ 0.23
TDP1-206ENST00000553569 ARPC5LQ9BPX5 153 aa16.51■□□□□ 0.23
TDP1-206ENST00000553569 INSP01308 110 aa16.5■□□□□ 0.23
TDP1-206ENST00000553569 RBMY1A1P0DJD3 496 aaKnown RBP16.5■□□□□ 0.23
TDP1-206ENST00000553569 RBMY1CP0DJD4 496 aa16.5■□□□□ 0.23
TDP1-206ENST00000553569 RBMY1FQ15415 496 aaKnown RBP16.5■□□□□ 0.23
TDP1-206ENST00000553569 PQLC2Q6ZP29 291 aa16.5■□□□□ 0.23
TDP1-206ENST00000553569 C1orf158Q8N1D5 194 aa16.5■□□□□ 0.23
TDP1-206ENST00000553569 RPP25LQ8N5L8 163 aaKnown RBP16.5■□□□□ 0.23
TDP1-206ENST00000553569 RANP62826 216 aaKnown RBP16.49■□□□□ 0.23
TDP1-206ENST00000553569 RAB24Q969Q5 203 aa16.49■□□□□ 0.23
TDP1-206ENST00000553569 TMEM208Q9BTX3 173 aa16.49■□□□□ 0.23
TDP1-206ENST00000553569 Q9H3A6 140 aa16.49■□□□□ 0.23
TDP1-206ENST00000553569 CXorf65A6NEN9 183 aa16.48■□□□□ 0.23
TDP1-206ENST00000553569 NPIPB6E9PJ23 425 aa16.48■□□□□ 0.23
TDP1-206ENST00000553569 CRXO43186 299 aaPredicted RBP16.48■□□□□ 0.23
TDP1-206ENST00000553569 ARL14EPLP0DKL9 152 aa16.48■□□□□ 0.23
TDP1-206ENST00000553569 IGKV2-40A0A087WW87 121 aaPredicted RBP16.47■□□□□ 0.23
TDP1-206ENST00000553569 A0A0D9SG52 128 aa16.47■□□□□ 0.23
TDP1-206ENST00000553569 IGKV2D-40P01614 121 aaPredicted RBP16.47■□□□□ 0.23
TDP1-206ENST00000553569 ERCC8Q13216 396 aa16.47■□□□□ 0.23
TDP1-206ENST00000553569 ACTR3CQ9C0K3 210 aaPredicted RBP16.47■□□□□ 0.23
TDP1-206ENST00000553569 KANTRA0A1W2PQU2 76 aa16.46■□□□□ 0.23
TDP1-206ENST00000553569 BCL2L11O43521 198 aa16.46■□□□□ 0.23
TDP1-206ENST00000553569 STAG3L2P0CL84 134 aa16.46■□□□□ 0.23
TDP1-206ENST00000553569 STAG3L3P0CL85 134 aa16.46■□□□□ 0.23
TDP1-206ENST00000553569 CDKN1BP46527 198 aa16.46■□□□□ 0.23
TDP1-206ENST00000553569 NANOS2P60321 138 aaKnown RBP16.46■□□□□ 0.23
TDP1-206ENST00000553569 AKR1C8PQ5T2L2 129 aa16.46■□□□□ 0.23
TDP1-206ENST00000553569 TCTE3Q8IZS6 198 aa16.46■□□□□ 0.23
TDP1-206ENST00000553569 C11orf45Q8TAV5 145 aa16.46■□□□□ 0.23
TDP1-206ENST00000553569 NEU1Q99519 415 aa16.46■□□□□ 0.23
TDP1-206ENST00000553569 J3KRW8 73 aa16.45■□□□□ 0.22
TDP1-206ENST00000553569 HBE1P02100 147 aa16.45■□□□□ 0.22
TDP1-206ENST00000553569 CT45A10P0DMU9 189 aa16.45■□□□□ 0.22
TDP1-206ENST00000553569 SSX7Q7RTT5 188 aa16.45■□□□□ 0.22
TDP1-206ENST00000553569 LYPD1Q8N2G4 141 aa16.45■□□□□ 0.22
TDP1-206ENST00000553569 ZNF471Q9BX82 626 aaPredicted RBP16.45■□□□□ 0.22
TDP1-206ENST00000553569 SMIM9A6NGZ8 99 aa16.44■□□□□ 0.22
TDP1-206ENST00000553569 PFDN1O60925 122 aa16.44■□□□□ 0.22
TDP1-206ENST00000553569 TSPOP30536 169 aa16.44■□□□□ 0.22
TDP1-206ENST00000553569 LEPP41159 167 aa16.44■□□□□ 0.22
TDP1-206ENST00000553569 CSN1S1P47710 185 aa16.44■□□□□ 0.22
TDP1-206ENST00000553569 KIR3DS1Q14943 382 aa16.44■□□□□ 0.22
TDP1-206ENST00000553569 IQCF2Q8IXL9 164 aa16.44■□□□□ 0.22
TDP1-206ENST00000553569 HYLS1Q96M11 299 aa16.44■□□□□ 0.22
TDP1-206ENST00000553569 GCHFRP30047 84 aa16.43■□□□□ 0.22
TDP1-206ENST00000553569 EMP1P54849 157 aa16.43■□□□□ 0.22
TDP1-206ENST00000553569 TMUB2Q71RG4 321 aa16.43■□□□□ 0.22
TDP1-206ENST00000553569 AKAP14Q86UN6 197 aa16.43■□□□□ 0.22
TDP1-206ENST00000553569 ODF3Q96PU9 254 aa16.43■□□□□ 0.22
TDP1-206ENST00000553569 AGPAT4-IT1Q9H0P7 198 aa16.43■□□□□ 0.22
TDP1-206ENST00000553569 OTORQ9NRC9 128 aa16.43■□□□□ 0.22
TDP1-206ENST00000553569 RPH3ALQ9UNE2 315 aa16.43■□□□□ 0.22
TDP1-206ENST00000553569 CXorf1O96002 111 aa16.42■□□□□ 0.22
TDP1-206ENST00000553569 ZNF726P1Q15940 193 aa16.42■□□□□ 0.22
TDP1-206ENST00000553569 RRN3P1Q2M238 152 aa16.42■□□□□ 0.22
TDP1-206ENST00000553569 VGLL1Q99990 258 aa16.42■□□□□ 0.22
TDP1-206ENST00000553569 CELA1Q9UNI1 258 aa16.42■□□□□ 0.22
TDP1-206ENST00000553569 CTXND1A0A1B0GTU2 59 aa16.41■□□□□ 0.22
TDP1-206ENST00000553569 LOC102723971A0A1B0GUV8 181 aa16.41■□□□□ 0.22
TDP1-206ENST00000553569 PGPA6NDG6 321 aa16.41■□□□□ 0.22
TDP1-206ENST00000553569 ZNF705GA8MUZ8 300 aaPredicted RBP16.41■□□□□ 0.22
TDP1-206ENST00000553569 PRM2P04554 102 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms