RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SUMO4Q6EEV6 95 aa4.93□□□□□ -1.62
ATXN3-219ENST00000553488 TMEM229BQ8NBD8 167 aa4.93□□□□□ -1.62
ATXN3-219ENST00000553488 GPR132Q9UNW8 380 aa4.93□□□□□ -1.62
ATXN3-219ENST00000553488 C14orf166Q9Y224 244 aaKnown RBP4.93□□□□□ -1.62
ATXN3-219ENST00000553488 A0A0B4J2A0 478 aa4.92□□□□□ -1.62
ATXN3-219ENST00000553488 KRTAP29-1A8MX34 341 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-219ENST00000553488 PITX3O75364 302 aa4.92□□□□□ -1.62
ATXN3-219ENST00000553488 ADAP1O75689 374 aa4.92□□□□□ -1.62
ATXN3-219ENST00000553488 GAGE7O76087 117 aa4.92□□□□□ -1.62
ATXN3-219ENST00000553488 NXPH4O95158 308 aa4.92□□□□□ -1.62
ATXN3-219ENST00000553488 GAGE12FP0CL80 117 aa4.92□□□□□ -1.62
ATXN3-219ENST00000553488 GAGE12GP0CL81 117 aa4.92□□□□□ -1.62
ATXN3-219ENST00000553488 GAGE12IP0CL82 117 aa4.92□□□□□ -1.62
ATXN3-219ENST00000553488 CCR6P51684 374 aa4.92□□□□□ -1.62
ATXN3-219ENST00000553488 GFI1BQ5VTD9 330 aa4.92□□□□□ -1.62
ATXN3-219ENST00000553488 STEAP1BQ6NZ63 245 aa4.92□□□□□ -1.62
ATXN3-219ENST00000553488 Q6ZTI0 123 aa4.92□□□□□ -1.62
ATXN3-219ENST00000553488 LYZL2Q7Z4W2 148 aa4.92□□□□□ -1.62
ATXN3-219ENST00000553488 C20orf144Q9BQM9 153 aa4.92□□□□□ -1.62
ATXN3-219ENST00000553488 PARD6GQ9BYG4 376 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-219ENST00000553488 BATF3Q9NR55 127 aa4.92□□□□□ -1.62
ATXN3-219ENST00000553488 SHPKQ9UHJ6 478 aa4.92□□□□□ -1.62
ATXN3-219ENST00000553488 MRPS12O15235 138 aaKnown RBP4.91□□□□□ -1.62
ATXN3-219ENST00000553488 IFNA5P01569 189 aa4.91□□□□□ -1.62
ATXN3-219ENST00000553488 RLN2P04090 185 aa4.91□□□□□ -1.62
ATXN3-219ENST00000553488 ORM2P19652 201 aa4.91□□□□□ -1.62
ATXN3-219ENST00000553488 RHOBP62745 196 aa4.91□□□□□ -1.62
ATXN3-219ENST00000553488 FGL1Q08830 312 aa4.91□□□□□ -1.62
ATXN3-219ENST00000553488 PSG3Q16557 428 aa4.91□□□□□ -1.62
ATXN3-219ENST00000553488 GGNBP1Q5YKI7 109 aa4.91□□□□□ -1.62
ATXN3-219ENST00000553488 BPIFCQ8NFQ6 507 aa4.91□□□□□ -1.62
ATXN3-219ENST00000553488 OR1S1Q8NH92 325 aa4.91□□□□□ -1.62
ATXN3-219ENST00000553488 SHANK2-AS3Q9BTD1 123 aa4.91□□□□□ -1.62
ATXN3-219ENST00000553488 TMEM70Q9BUB7 260 aa4.91□□□□□ -1.62
ATXN3-219ENST00000553488 TMEM147Q9BVK8 224 aa4.91□□□□□ -1.62
ATXN3-219ENST00000553488 Q9H521 79 aa4.91□□□□□ -1.62
ATXN3-219ENST00000553488 EXTL2Q9UBQ6 330 aa4.91□□□□□ -1.62
ATXN3-219ENST00000553488 FAM25AB3EWG3 89 aa4.9□□□□□ -1.63
ATXN3-219ENST00000553488 FAM25CB3EWG5 89 aa4.9□□□□□ -1.63
ATXN3-219ENST00000553488 FAM25GB3EWG6 89 aa4.9□□□□□ -1.63
ATXN3-219ENST00000553488 IAPPP10997 89 aa4.9□□□□□ -1.63
ATXN3-219ENST00000553488 RPL7P18124 248 aaKnown RBP4.9□□□□□ -1.63
ATXN3-219ENST00000553488 PLP1P60201 277 aa4.9□□□□□ -1.63
ATXN3-219ENST00000553488 VBP1P61758 197 aa4.9□□□□□ -1.63
ATXN3-219ENST00000553488 SSBP1Q04837 148 aaKnown RBP4.9□□□□□ -1.63
ATXN3-219ENST00000553488 DAZ2Q13117 558 aaKnown RBP4.9□□□□□ -1.63
ATXN3-219ENST00000553488 TMED4Q7Z7H5 227 aa4.9□□□□□ -1.63
ATXN3-219ENST00000553488 NFE4Q86UQ8 179 aa4.9□□□□□ -1.63
ATXN3-219ENST00000553488 C11orf72Q8NBR9 251 aa4.9□□□□□ -1.63
ATXN3-219ENST00000553488 RPUSD4Q96CM3 377 aaKnown RBP4.9□□□□□ -1.63
ATXN3-219ENST00000553488 LINC00467Q9BRT7 94 aa4.9□□□□□ -1.63
ATXN3-219ENST00000553488 LINC00854A0A1B0GVQ3 168 aa4.89□□□□□ -1.63
ATXN3-219ENST00000553488 SNURFLB1AK76 121 aa4.89□□□□□ -1.63
ATXN3-219ENST00000553488 DISC1C4P0D8 188 aa4.89□□□□□ -1.63
ATXN3-219ENST00000553488 PRAC2D3DTV9 90 aa4.89□□□□□ -1.63
ATXN3-219ENST00000553488 ATP6V1G2O95670 118 aa4.89□□□□□ -1.63
ATXN3-219ENST00000553488 AKR1C4P17516 323 aa4.89□□□□□ -1.63
ATXN3-219ENST00000553488 CXCL2P19875 107 aa4.89□□□□□ -1.63
ATXN3-219ENST00000553488 RAB11AP62491 216 aa4.89□□□□□ -1.63
ATXN3-219ENST00000553488 ACOT7LQ6ZUV0 252 aa4.89□□□□□ -1.63
ATXN3-219ENST00000553488 ZBTB8BQ8NAP8 495 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-219ENST00000553488 OR51S1Q8NGJ8 323 aa4.89□□□□□ -1.63
ATXN3-219ENST00000553488 SMIM4Q8WVI0 70 aa4.89□□□□□ -1.63
ATXN3-219ENST00000553488 PRRT1Q99946 306 aa4.89□□□□□ -1.63
ATXN3-219ENST00000553488 FUNDC2Q9BWH2 189 aa4.89□□□□□ -1.63
ATXN3-219ENST00000553488 MIXL1Q9H2W2 232 aa4.89□□□□□ -1.63
ATXN3-219ENST00000553488 ZNF331Q9NQX6 463 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-219ENST00000553488 HIGD1AQ9Y241 93 aa4.89□□□□□ -1.63
ATXN3-219ENST00000553488 DUXBA0A1W2PPF3 345 aa4.88□□□□□ -1.63
ATXN3-219ENST00000553488 LRCOL1A6NCL2 159 aa4.88□□□□□ -1.63
ATXN3-219ENST00000553488 SLC17A3O00476 420 aa4.88□□□□□ -1.63
ATXN3-219ENST00000553488 ZNF324O75467 553 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-219ENST00000553488 NPSP0C0P6 89 aa4.88□□□□□ -1.63
ATXN3-219ENST00000553488 LINC00869P0C866 280 aa4.88□□□□□ -1.63
ATXN3-219ENST00000553488 AKAIN1P0CW23 69 aa4.88□□□□□ -1.63
ATXN3-219ENST00000553488 S100A7P31151 101 aa4.88□□□□□ -1.63
ATXN3-219ENST00000553488 AKR1C1Q04828 323 aa4.88□□□□□ -1.63
ATXN3-219ENST00000553488 PATE2Q6UY27 113 aa4.88□□□□□ -1.63
ATXN3-219ENST00000553488 CYP2G1PQ6ZSU1 146 aa4.88□□□□□ -1.63
ATXN3-219ENST00000553488 WFDC10BQ8IUB3 73 aa4.88□□□□□ -1.63
ATXN3-219ENST00000553488 C15orf40Q8WUR7 153 aa4.88□□□□□ -1.63
ATXN3-219ENST00000553488 ODF3Q96PU9 254 aa4.88□□□□□ -1.63
ATXN3-219ENST00000553488 PYGO2Q9BRQ0 406 aa4.88□□□□□ -1.63
ATXN3-219ENST00000553488 MSRB1Q9NZV6 116 aa4.88□□□□□ -1.63
ATXN3-219ENST00000553488 PAIP2BQ9ULR5 123 aaKnown RBP4.88□□□□□ -1.63
ATXN3-219ENST00000553488 ICOSQ9Y6W8 199 aa4.88□□□□□ -1.63
ATXN3-219ENST00000553488 TRGV2A0A075B6R0 118 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 IGLV5-52A0A0A0MRZ9 124 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 TRAV12-3A0A0B4J271 114 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 PMS2P5A8MQ11 134 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 H3BP45 60 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 SPINK4O60575 86 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 HYPMO75409 117 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 CT45A10P0DMU9 189 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 SLC25A6P12236 298 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 SRPXP78539 464 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 MRPS10P82664 201 aaKnown RBP4.87□□□□□ -1.63
ATXN3-219ENST00000553488 SERTAD4-AS1Q5TG53 156 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 LYPD5Q6UWN5 251 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 LCN15Q6UWW0 184 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms