RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 C2orf82Q6UX34 121 aa9.27□□□□□ -0.93
SYNE2-208ENST00000553289 WDR86Q86TI4 376 aa9.27□□□□□ -0.93
SYNE2-208ENST00000553289 C1orf159Q96HA4 380 aa9.27□□□□□ -0.93
SYNE2-208ENST00000553289 SMKR1H3BMG3 65 aa9.26□□□□□ -0.93
SYNE2-208ENST00000553289 C15orf65H3BRN8 121 aa9.26□□□□□ -0.93
SYNE2-208ENST00000553289 SS18Q15532 418 aa9.26□□□□□ -0.93
SYNE2-208ENST00000553289 DNAJC30Q96LL9 226 aa9.26□□□□□ -0.93
SYNE2-208ENST00000553289 FXYD7P58549 80 aa9.26□□□□□ -0.93
SYNE2-208ENST00000553289 POU2AF1Q16633 256 aa9.26□□□□□ -0.93
SYNE2-208ENST00000553289 TSC2P49815 1807 aa9.26□□□□□ -0.93
SYNE2-208ENST00000553289 H3BRN7 92 aa9.26□□□□□ -0.93
SYNE2-208ENST00000553289 NDUFA4O00483 81 aa9.26□□□□□ -0.93
SYNE2-208ENST00000553289 C11orf52Q96A22 123 aa9.26□□□□□ -0.93
SYNE2-208ENST00000553289 CNOT1A5YKK6 2376 aaKnown RBP9.26□□□□□ -0.93
SYNE2-208ENST00000553289 MED12Q93074 2177 aa9.26□□□□□ -0.93
SYNE2-208ENST00000553289 PRB4P10163 310 aaPredicted RBP9.26□□□□□ -0.93
SYNE2-208ENST00000553289 RIPPLY3P57055 190 aa9.25□□□□□ -0.93
SYNE2-208ENST00000553289 SYNJ2BPP57105 145 aa9.25□□□□□ -0.93
SYNE2-208ENST00000553289 THAP8Q8NA92 274 aa9.25□□□□□ -0.93
SYNE2-208ENST00000553289 A0A087WWL8 130 aa9.25□□□□□ -0.93
SYNE2-208ENST00000553289 SMIM27A0A1W2PRY6 76 aa9.25□□□□□ -0.93
SYNE2-208ENST00000553289 SSBP2P81877 361 aaPredicted RBP9.25□□□□□ -0.93
SYNE2-208ENST00000553289 ZNF726P1Q15940 193 aa9.25□□□□□ -0.93
SYNE2-208ENST00000553289 C8orf31Q8N9H6 132 aa9.25□□□□□ -0.93
SYNE2-208ENST00000553289 A8MWP6 167 aa9.25□□□□□ -0.93
SYNE2-208ENST00000553289 RPL35AP18077 110 aaKnown RBP9.25□□□□□ -0.93
SYNE2-208ENST00000553289 DEFB131AP59861 70 aa9.25□□□□□ -0.93
SYNE2-208ENST00000553289 PRIMA1Q86XR5 153 aa9.25□□□□□ -0.93
SYNE2-208ENST00000553289 KAAG1Q9UBP8 84 aa9.25□□□□□ -0.93
SYNE2-208ENST00000553289 LY6HO94772 140 aa9.25□□□□□ -0.93
SYNE2-208ENST00000553289 V9GYV3 84 aa9.25□□□□□ -0.93
SYNE2-208ENST00000553289 PTPRDP23468 1912 aa9.24□□□□□ -0.93
SYNE2-208ENST00000553289 J3QLI3 93 aa9.24□□□□□ -0.93
SYNE2-208ENST00000553289 Q8NFD4 153 aa9.24□□□□□ -0.93
SYNE2-208ENST00000553289 RSPO3Q9BXY4 272 aaPredicted RBP9.24□□□□□ -0.93
SYNE2-208ENST00000553289 POLR3KQ9Y2Y1 108 aaPredicted RBP9.24□□□□□ -0.93
SYNE2-208ENST00000553289 SRSF2Q01130 221 aaKnown RBP9.24□□□□□ -0.93
SYNE2-208ENST00000553289 RSPO1Q2MKA7 263 aaPredicted RBP9.24□□□□□ -0.93
SYNE2-208ENST00000553289 TMEM213A2RRL7 107 aa9.24□□□□□ -0.93
SYNE2-208ENST00000553289 LINC01619G3V211 115 aa9.24□□□□□ -0.93
SYNE2-208ENST00000553289 IGHV3-53P01767 116 aa9.24□□□□□ -0.93
SYNE2-208ENST00000553289 PRR25Q96S07 402 aa9.24□□□□□ -0.93
SYNE2-208ENST00000553289 PLA2G2CQ5R387 149 aa9.24□□□□□ -0.93
SYNE2-208ENST00000553289 COX11Q9Y6N1 276 aa9.24□□□□□ -0.93
SYNE2-208ENST00000553289 HEATR1Q9H583 2144 aaKnown RBP9.23□□□□□ -0.93
SYNE2-208ENST00000553289 I3L3M4 83 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 K7EM74 188 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 C2orf66Q6UXQ4 117 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 ZNRD1Q9P1U0 126 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 AKAP6Q13023 2319 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 PRR31Q5SQ13 230 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 UBE2E2Q96LR5 201 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 PLXNA2O75051 1894 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 PMVKQ15126 192 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 SSC4DQ8WTU2 575 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 C8orf49Q96NF6 230 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 NAA38Q9BRA0 125 aaKnown RBP9.23□□□□□ -0.93
SYNE2-208ENST00000553289 TP53TG1Q9Y2A0 90 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 PHF3Q92576 2039 aaKnown RBP9.23□□□□□ -0.93
SYNE2-208ENST00000553289 PI4KAP42356 2102 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 TRAV13-1A0A0B4J241 112 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 MMP23AO75900 390 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 NPC2P61916 151 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 C8orf86Q6ZUL3 223 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 CYYR1Q96J86 154 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 SPXQ9BT56 116 aa9.23□□□□□ -0.93
SYNE2-208ENST00000553289 WT1-ASQ06250 92 aa9.22□□□□□ -0.93
SYNE2-208ENST00000553289 LAMTOR3Q9UHA4 124 aa9.22□□□□□ -0.93
SYNE2-208ENST00000553289 SELENOKQ9Y6D0 94 aa9.22□□□□□ -0.93
SYNE2-208ENST00000553289 EP300Q09472 2414 aaPredicted RBP9.22□□□□□ -0.93
SYNE2-208ENST00000553289 IGHV1OR15-1A0A075B7D0 117 aa9.22□□□□□ -0.93
SYNE2-208ENST00000553289 LGALS9BQ3B8N2 356 aa9.22□□□□□ -0.93
SYNE2-208ENST00000553289 LGALS9CQ6DKI2 356 aa9.22□□□□□ -0.93
SYNE2-208ENST00000553289 UBE2DNLQ8IWF7 75 aa9.22□□□□□ -0.93
SYNE2-208ENST00000553289 MGAMO43451 1857 aa9.22□□□□□ -0.93
SYNE2-208ENST00000553289 NLRC5Q86WI3 1866 aa9.22□□□□□ -0.93
SYNE2-208ENST00000553289 TRBV20-1A0A075B6N2 111 aa9.22□□□□□ -0.93
SYNE2-208ENST00000553289 ZNF503-AS2A6NEH8 195 aa9.22□□□□□ -0.93
SYNE2-208ENST00000553289 H3BUA1 57 aa9.22□□□□□ -0.93
SYNE2-208ENST00000553289 RUSC1-AS1Q66K80 236 aa9.22□□□□□ -0.93
SYNE2-208ENST00000553289 IL15RAQ13261 267 aa9.21□□□□□ -0.93
SYNE2-208ENST00000553289 SPANXA1Q9NS26 97 aa9.21□□□□□ -0.93
SYNE2-208ENST00000553289 GAGE12BA1L429 117 aa9.21□□□□□ -0.93
SYNE2-208ENST00000553289 MRPL51Q4U2R6 128 aaKnown RBP9.21□□□□□ -0.93
SYNE2-208ENST00000553289 COL4A6Q14031 1691 aa9.21□□□□□ -0.94
SYNE2-208ENST00000553289 C1orf122Q6ZSJ8 110 aa9.21□□□□□ -0.94
SYNE2-208ENST00000553289 KLF12Q9Y4X4 402 aa9.21□□□□□ -0.94
SYNE2-208ENST00000553289 DKK1O94907 266 aa9.21□□□□□ -0.94
SYNE2-208ENST00000553289 OR11H6Q8NGC7 330 aa9.21□□□□□ -0.94
SYNE2-208ENST00000553289 ZNF524Q96C55 264 aa9.21□□□□□ -0.94
SYNE2-208ENST00000553289 WISP1O95388 367 aa9.2□□□□□ -0.94
SYNE2-208ENST00000553289 IGLC1P0CG04 106 aa9.2□□□□□ -0.94
SYNE2-208ENST00000553289 PRR20EP86478 221 aa9.2□□□□□ -0.94
SYNE2-208ENST00000553289 PRR20CP86479 221 aa9.2□□□□□ -0.94
SYNE2-208ENST00000553289 PRR20DP86480 221 aa9.2□□□□□ -0.94
SYNE2-208ENST00000553289 PRR20BP86481 221 aa9.2□□□□□ -0.94
SYNE2-208ENST00000553289 PRR20AP86496 221 aa9.2□□□□□ -0.94
SYNE2-208ENST00000553289 STPG4Q8N801 248 aa9.2□□□□□ -0.94
SYNE2-208ENST00000553289 KIAA2026Q5HYC2 2103 aa9.2□□□□□ -0.94
SYNE2-208ENST00000553289 F8WEM9 126 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms