RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 RBM48Q5RL73 367 aaKnown RBP2.39□□□□□ -2.03
ATXN3-217ENST00000553287 OR4B1Q8NGF8 309 aa2.39□□□□□ -2.03
ATXN3-217ENST00000553287 OR4S2Q8NH73 311 aa2.39□□□□□ -2.03
ATXN3-217ENST00000553287 DGCR14Q96DF8 476 aaKnown RBP2.39□□□□□ -2.03
ATXN3-217ENST00000553287 ADTRPQ96IZ2 230 aa2.39□□□□□ -2.03
ATXN3-217ENST00000553287 SLC29A1Q99808 456 aa2.39□□□□□ -2.03
ATXN3-217ENST00000553287 C7orf50Q9BRJ6 194 aaKnown RBP2.39□□□□□ -2.03
ATXN3-217ENST00000553287 NDFIP1Q9BT67 221 aa2.39□□□□□ -2.03
ATXN3-217ENST00000553287 POMPQ9Y244 141 aa2.39□□□□□ -2.03
ATXN3-217ENST00000553287 PRELID3BQ9Y3B1 194 aa2.39□□□□□ -2.03
ATXN3-217ENST00000553287 F11RQ9Y624 299 aaKnown RBP2.39□□□□□ -2.03
ATXN3-217ENST00000553287 DNAH8Q96JB1 4490 aa2.39□□□□□ -2.03
ATXN3-217ENST00000553287 TRAV26-1A0A087WT03 109 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 A0A096LPF7 62 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 I3L2K1 104 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 GNG7O60262 68 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 HBE1P02100 147 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 TRAPPC2P0DI81 140 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 TRAPPC2BP0DI82 140 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 HTN1P15515 57 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 KRTAP10-4P60372 401 aaPredicted RBP2.38□□□□□ -2.03
ATXN3-217ENST00000553287 REG3AQ06141 175 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 ACSM3Q53FZ2 586 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 TMEM41BQ5BJD5 291 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 HES5Q5TA89 166 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 OR51H1Q8NH63 302 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 VSTM2AQ8TAG5 236 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 DEFB104AQ8WTQ1 72 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 MRPL48Q96GC5 212 aaKnown RBP2.38□□□□□ -2.03
ATXN3-217ENST00000553287 Q96MT0 163 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 LINC00052Q96N35 136 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 UQCC2Q9BRT2 126 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 COMMD5Q9GZQ3 224 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 MRPS7Q9Y2R9 242 aaKnown RBP2.38□□□□□ -2.03
ATXN3-217ENST00000553287 OR51B2Q9Y5P1 312 aa2.38□□□□□ -2.03
ATXN3-217ENST00000553287 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 TRAV12-2A0A075B6T6 113 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 PLAC8L1A1L4L8 177 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 TMEM189A5PLL7 270 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 M0R2Z0 102 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 PEX7O00628 323 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 WBP4O75554 376 aaKnown RBP2.37□□□□□ -2.03
ATXN3-217ENST00000553287 HRASP01112 189 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 KRASP01116 189 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 IGLV2-8P01709 118 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 HLA-DQB1P01920 261 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 UBBP0CG47 229 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 MT1HL1P0DM35 61 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 NPPCP23582 126 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 DCKP27707 260 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 G6PCP35575 357 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 SERPINB10P48595 397 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 UBE2AP49459 152 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 FXYD4P59646 89 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 MRPL28Q13084 256 aaKnown RBP2.37□□□□□ -2.03
ATXN3-217ENST00000553287 RCN1Q15293 331 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 RRN3P1Q2M238 152 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 CCDC58Q4VC31 144 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 KCNIP4Q6PIL6 250 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 TMPRSS11AQ6ZMR5 421 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 PYDC1Q8WXC3 89 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 TMEM203Q969S6 136 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 FGF20Q9NP95 211 aaPredicted RBP2.37□□□□□ -2.03
ATXN3-217ENST00000553287 NDUFA4L2Q9NRX3 87 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 BET1LQ9NYM9 111 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 AP4S1Q9Y587 144 aa2.37□□□□□ -2.03
ATXN3-217ENST00000553287 LPAP08519 4548 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 FAT4Q6V0I7 4981 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 TRAV2A0A0B4J234 112 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 BOLA2-SMG1P6H3BVE0 249 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 MFNGO00587 321 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 GYG2O15488 501 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 DENRO43583 198 aaKnown RBP2.36□□□□□ -2.03
ATXN3-217ENST00000553287 CCNKO75909 580 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 TMEM50AO95807 157 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 HLA-DRB4P13762 266 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 CD36P16671 472 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 CRYBB3P26998 211 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 TALDO1P37837 337 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 RORCP51449 518 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 OR10A3P58181 314 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 NUTF2P61970 127 aaKnown RBP2.36□□□□□ -2.03
ATXN3-217ENST00000553287 GNGT1P63211 74 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 MRPS15P82914 257 aaKnown RBP2.36□□□□□ -2.03
ATXN3-217ENST00000553287 OXA1LQ15070 435 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 RAB11BQ15907 218 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 SPINK13Q1W4C9 94 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 TTC32Q5I0X7 151 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 FAM78BQ5VT40 261 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 CDH26Q8IXH8 852 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 BAP18Q8IXM2 172 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 OR1L8Q8NGR8 309 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 LSM10Q969L4 123 aaKnown RBP2.36□□□□□ -2.03
ATXN3-217ENST00000553287 TMEM230Q96A57 120 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 RMI2Q96E14 147 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 GNPNAT1Q96EK6 184 aaPredicted RBP2.36□□□□□ -2.03
ATXN3-217ENST00000553287 METTL26Q96S19 204 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 GINS3Q9BRX5 216 aa2.36□□□□□ -2.03
ATXN3-217ENST00000553287 TMEM208Q9BTX3 173 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms