RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-231	ENST00000553055	BCL2L10	Q9HD36	194 aa		4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	FAM60A	Q9NP50	221 aa		4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	ASF1B	Q9NVP2	202 aa		4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	NBEAL2	Q6ZNJ1	2754 aa		4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	TP53BP1	Q12888	1972 aa	Predicted RBP	4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	DIDO1	Q9BTC0	2240 aa	Known RBP	4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	IGKV1-12	A0A0C4DH73	117 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	DUXB	A0A1W2PPF3	345 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	MCRIP1	C9JLW8	97 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055		F8W036	122 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	GABARAP	H6UMI1	98 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055		J3KT08	172 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	RBFOX2	O43251	390 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	NRAS	P01111	189 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	HRAS	P01112	189 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	KRAS	P01116	189 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	IGKV1D-12	P01611	117 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	CCL4	P13236	92 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	ZNF32	P17041	273 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	GNB2	P62879	340 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	LTC4S	Q16873	150 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	ZNF791	Q3KP31	576 aa	Predicted RBP	4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	LCE3B	Q5TA77	95 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	WDR86	Q86TI4	376 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	KRTAP1-3	Q8IUG1	177 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	RNF175	Q8N4F7	328 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	ACBD7	Q8N6N7	88 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	CACYBP	Q9HB71	228 aa	Known RBP	4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	CALML5	Q9NZT1	146 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	RPUSD1	Q9UJJ7	312 aa	Known RBP	4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	ZNF580	Q9UK33	172 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055	ABCA4	P78363	2273 aa		4.93	□□□□□ -1.62
PFKM-231	ENST00000553055		A0A087WX48	190 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055		A0A1B0GX51	115 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	TMEM189	A5PLL7	270 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055		C9JCJ5	164 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055		J3QRE1	110 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	BCL2L11	O43521	198 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	IFNA10	P01566	189 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	IGHV1-46	P01743	117 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	APOC3	P02656	99 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	SMIM6	P0DI80	62 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	BLVRB	P30043	206 aa	Predicted RBP	4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	RAB13	P51153	203 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	ENDOG	Q14249	297 aa	Known RBP	4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	DEFB133	Q30KQ1	61 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	GPHB5	Q86YW7	130 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	H1FOO	Q8IZA3	346 aa	Predicted RBP	4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	EXOC3-AS1	Q8N2X6	119 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	LRRC18	Q8N456	261 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	OR4K13	Q8NH42	304 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	LMX1A	Q8TE12	382 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	MRPS24	Q96EL2	167 aa	Known RBP	4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	C12orf57	Q99622	126 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	VPS25	Q9BRG1	176 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	PLA2G12A	Q9BZM1	189 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	LHX9	Q9NQ69	397 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	ZNF355P	Q9NSJ1	428 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	ZNF230	Q9UIE0	474 aa	Predicted RBP	4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	LAMTOR2	Q9Y2Q5	125 aa		4.92	□□□□□ -1.62
PFKM-231	ENST00000553055	TG	P01266	2768 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055		A0A0D9SG52	128 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	TRAPPC2L	H3BP13	241 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	HMGN4	O00479	90 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	NDUFB6	O95139	128 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	S100A8	P05109	93 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	S100A7	P31151	101 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	SPINT3	P49223	89 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	VEGFC	P49767	419 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	AKR1D1	P51857	326 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	PIGP	P57054	158 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	ZNF345	Q14585	488 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	SP6	Q3SY56	376 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	HAGHL	Q6PII5	290 aa	Predicted RBP	4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	SVBP	Q8N300	66 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	OR11G2	Q8NGC1	345 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	ADAT3	Q96EY9	351 aa	Predicted RBP	4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	TCEAL7	Q9BRU2	100 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	PDCD10	Q9BUL8	212 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	KRTAP9-4	Q9BYQ2	154 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	TAS2R8	Q9NYW2	309 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	PHLDA3	Q9Y5J5	127 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	PRRC2C	Q9Y520	2896 aa	Known RBP	4.91	□□□□□ -1.62
PFKM-231	ENST00000553055	RP1	P56715	2156 aa		4.91	□□□□□ -1.62
PFKM-231	ENST00000553055		A0A087WUU8	490 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	FXYD6-FXYD2	A0A087WZ82	144 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	KANTR	A0A1W2PQU2	76 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	IGLL5	B9A064	214 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055		K7EP13	123 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	RPL35	P42766	123 aa	Known RBP	4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	DEFA5	Q01523	94 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	SSBP1	Q04837	148 aa	Known RBP	4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	ZNF616	Q08AN1	781 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	PSG7	Q13046	419 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	OR8B8	Q15620	311 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	AMTN	Q6UX39	209 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	ALKAL2	Q6UX46	152 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	ZNF709	Q8N972	641 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	OR10D4P	Q8NGN7	298 aa		4.9	□□□□□ -1.63
PFKM-231	ENST00000553055	SEC22C	Q9BRL7	303 aa		4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms