RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 TRBV24-1A0A075B6N3 115 aa6.36□□□□□ -1.39
TMEM116-217ENST00000552801 TRAV10A0A0B4J240 114 aa6.36□□□□□ -1.39
TMEM116-217ENST00000552801 PHOX2AO14813 284 aa6.36□□□□□ -1.39
TMEM116-217ENST00000552801 IFNA1P01562 189 aa6.36□□□□□ -1.39
TMEM116-217ENST00000552801 S100A9P06702 114 aaKnown RBP6.36□□□□□ -1.39
TMEM116-217ENST00000552801 MIFP14174 115 aa6.36□□□□□ -1.39
TMEM116-217ENST00000552801 HOXA5P20719 270 aa6.36□□□□□ -1.39
TMEM116-217ENST00000552801 NPY1RP25929 384 aa6.36□□□□□ -1.39
TMEM116-217ENST00000552801 NUTF2P61970 127 aaKnown RBP6.36□□□□□ -1.39
TMEM116-217ENST00000552801 ATP6V1FQ16864 119 aa6.36□□□□□ -1.39
TMEM116-217ENST00000552801 SCGB1C1Q8TD33 95 aa6.36□□□□□ -1.39
TMEM116-217ENST00000552801 Q8WTZ3 238 aa6.36□□□□□ -1.39
TMEM116-217ENST00000552801 CTDSP1Q9GZU7 261 aa6.36□□□□□ -1.39
TMEM116-217ENST00000552801 OR51M1Q9H341 326 aa6.36□□□□□ -1.39
TMEM116-217ENST00000552801 PSENENQ9NZ42 101 aa6.36□□□□□ -1.39
TMEM116-217ENST00000552801 VAX2Q9UIW0 290 aa6.36□□□□□ -1.39
TMEM116-217ENST00000552801 TRAV30A0A087WSZ9 112 aa6.35□□□□□ -1.39
TMEM116-217ENST00000552801 HELTA6NFD8 242 aa6.35□□□□□ -1.39
TMEM116-217ENST00000552801 PCP4L1A6NKN8 68 aa6.35□□□□□ -1.39
TMEM116-217ENST00000552801 PMS2P5A8MQ11 134 aa6.35□□□□□ -1.39
TMEM116-217ENST00000552801 H3BP45 60 aa6.35□□□□□ -1.39
TMEM116-217ENST00000552801 ZNF688P0C7X2 276 aa6.35□□□□□ -1.39
TMEM116-217ENST00000552801 HLA-DMBP28068 263 aa6.35□□□□□ -1.39
TMEM116-217ENST00000552801 SNRPD3P62318 126 aaKnown RBP6.35□□□□□ -1.39
TMEM116-217ENST00000552801 SLC38A11Q08AI6 406 aa6.35□□□□□ -1.39
TMEM116-217ENST00000552801 ACTL10Q5JWF8 245 aa6.35□□□□□ -1.39
TMEM116-217ENST00000552801 CYP2G1PQ6ZSU1 146 aa6.35□□□□□ -1.39
TMEM116-217ENST00000552801 ZNF414Q96IQ9 312 aa6.35□□□□□ -1.39
TMEM116-217ENST00000552801 RSG1Q9BU20 258 aa6.35□□□□□ -1.39
TMEM116-217ENST00000552801 TMEM147Q9BVK8 224 aa6.35□□□□□ -1.39
TMEM116-217ENST00000552801 C1QTNF4Q9BXJ3 329 aa6.35□□□□□ -1.39
TMEM116-217ENST00000552801 VSIRQ9H7M9 311 aa6.35□□□□□ -1.39
TMEM116-217ENST00000552801 IGHV4-28A0A0C4DH34 117 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 A0A1B0GV50 99 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 MAP1LC3B2A6NCE7 125 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 IFITM10A6NMD0 228 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 TMEM250H0YL14 139 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 MBP02144 154 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 APOHP02749 345 aaPredicted RBP6.34□□□□□ -1.39
TMEM116-217ENST00000552801 FABP1P07148 127 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 CXCL1P09341 107 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 METTL15P1P0C7V9 234 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 S100PP25815 95 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 SSX7Q7RTT5 188 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 CIB3Q96Q77 187 aaPredicted RBP6.34□□□□□ -1.39
TMEM116-217ENST00000552801 PYGO2Q9BRQ0 406 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 KRTAP17-1Q9BYP8 105 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 KRTAP9-2Q9BYQ4 174 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 MAP1LC3BQ9GZQ8 125 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 SDF2L1Q9HCN8 221 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 MANBALQ9NQG1 85 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 GSN-AS1Q9NRJ2 163 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 AP5S1Q9NUS5 200 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 GNG13Q9P2W3 67 aa6.34□□□□□ -1.39
TMEM116-217ENST00000552801 IGHV4-4A0A075B6R2 117 aa6.33□□□□□ -1.4
TMEM116-217ENST00000552801 CTXND1A0A1B0GTU2 59 aa6.33□□□□□ -1.4
TMEM116-217ENST00000552801 UBE2L5PA0A1B0GUS4 154 aa6.33□□□□□ -1.4
TMEM116-217ENST00000552801 KNCNA6PVL3 124 aa6.33□□□□□ -1.4
TMEM116-217ENST00000552801 NXPH3O95157 252 aa6.33□□□□□ -1.4
TMEM116-217ENST00000552801 IAPPP10997 89 aa6.33□□□□□ -1.4
TMEM116-217ENST00000552801 IZUMO4Q1ZYL8 232 aa6.33□□□□□ -1.4
TMEM116-217ENST00000552801 PSMG4Q5JS54 123 aa6.33□□□□□ -1.4
TMEM116-217ENST00000552801 ETFRF1Q6IPR1 90 aa6.33□□□□□ -1.4
TMEM116-217ENST00000552801 LINC00336Q6ZUF6 198 aa6.33□□□□□ -1.4
TMEM116-217ENST00000552801 UBE2DNLQ8IWF7 75 aa6.33□□□□□ -1.4
TMEM116-217ENST00000552801 LILRB2Q8N423 598 aa6.33□□□□□ -1.4
TMEM116-217ENST00000552801 RBKSQ9H477 322 aa6.33□□□□□ -1.4
TMEM116-217ENST00000552801 HEYLQ9NQ87 328 aaPredicted RBP6.33□□□□□ -1.4
TMEM116-217ENST00000552801 NAT8Q9UHE5 227 aa6.33□□□□□ -1.4
TMEM116-217ENST00000552801 PLECQ15149 4684 aaKnown RBP6.33□□□□□ -1.4
TMEM116-217ENST00000552801 DEFB131BA0A096LNP1 70 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 TGIF2-C20orf24A0A0A6YYL0 155 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 CEBPZOSA8MTT3 80 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 ZNF727A8MUV8 499 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 LINC00587B1AMM8 73 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 K7EQG2 157 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 HIST1H2BKO60814 126 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 IFNA10P01566 189 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 HIST1H2BJP06899 126 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 P0DMU3 169 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 FAM231AP0DMU4 169 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 FAM231CP0DMU5 169 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 HIST1H2BOP23527 126 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 HIST1H2BBP33778 126 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 RPS10P46783 165 aaKnown RBP6.32□□□□□ -1.4
TMEM116-217ENST00000552801 HIST1H2BDP58876 126 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 RAB11AP62491 216 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 HIST1H2BCP62807 126 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 MEF2BQ02080 365 aaPredicted RBP6.32□□□□□ -1.4
TMEM116-217ENST00000552801 HIST2H2BEQ16778 126 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 TIGITQ495A1 244 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 COA6Q5JTJ3 125 aaKnown RBP6.32□□□□□ -1.4
TMEM116-217ENST00000552801 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.32□□□□□ -1.4
TMEM116-217ENST00000552801 PVRIGQ6DKI7 326 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 Q6ZTC4 211 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 TRPT1Q86TN4 253 aaKnown RBP6.32□□□□□ -1.4
TMEM116-217ENST00000552801 Q8NAQ8 132 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 OR4X1Q8NH49 305 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 HIST1H2BHQ93079 126 aa6.32□□□□□ -1.4
TMEM116-217ENST00000552801 FAM210BQ96KR6 192 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms