RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, human

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF40B-216	ENST00000552301	PSMG3	Q9BT73	122 aa	Predicted RBP	13.4	□□□□□ -0.26
PRPF40B-216	ENST00000552301	RFNG	Q9Y644	331 aa		13.4	□□□□□ -0.26
PRPF40B-216	ENST00000552301		M0R2Z0	102 aa		13.39	□□□□□ -0.27
PRPF40B-216	ENST00000552301	ATP6V0C	P27449	155 aa		13.39	□□□□□ -0.27
PRPF40B-216	ENST00000552301	RAB2A	P61019	212 aa		13.39	□□□□□ -0.27
PRPF40B-216	ENST00000552301	FAM122C	Q6P4D5	195 aa		13.39	□□□□□ -0.27
PRPF40B-216	ENST00000552301	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.39	□□□□□ -0.27
PRPF40B-216	ENST00000552301	C11orf45	Q8TAV5	145 aa		13.39	□□□□□ -0.27
PRPF40B-216	ENST00000552301	DNAH7	Q8WXX0	4024 aa		13.38	□□□□□ -0.27
PRPF40B-216	ENST00000552301		G3V3Q6	166 aa		13.38	□□□□□ -0.27
PRPF40B-216	ENST00000552301	SMLR1	H3BR10	107 aa		13.38	□□□□□ -0.27
PRPF40B-216	ENST00000552301	NDUFB4	O95168	129 aa		13.38	□□□□□ -0.27
PRPF40B-216	ENST00000552301	OR10G4	Q8NGN3	311 aa		13.38	□□□□□ -0.27
PRPF40B-216	ENST00000552301	OR10G9	Q8NGN4	311 aa		13.38	□□□□□ -0.27
PRPF40B-216	ENST00000552301	OR10G7	Q8NGN6	311 aa		13.38	□□□□□ -0.27
PRPF40B-216	ENST00000552301	OR2G3	Q8NGZ4	309 aa		13.38	□□□□□ -0.27
PRPF40B-216	ENST00000552301	FXYD5	Q96DB9	178 aa		13.38	□□□□□ -0.27
PRPF40B-216	ENST00000552301	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.38	□□□□□ -0.27
PRPF40B-216	ENST00000552301	SMIM9	A6NGZ8	99 aa		13.37	□□□□□ -0.27
PRPF40B-216	ENST00000552301	PRAC2	D3DTV9	90 aa		13.37	□□□□□ -0.27
PRPF40B-216	ENST00000552301		M0R3E3	92 aa		13.37	□□□□□ -0.27
PRPF40B-216	ENST00000552301	HBE1	P02100	147 aa		13.37	□□□□□ -0.27
PRPF40B-216	ENST00000552301	MB	P02144	154 aa		13.37	□□□□□ -0.27
PRPF40B-216	ENST00000552301	TSPO	P30536	169 aa		13.37	□□□□□ -0.27
PRPF40B-216	ENST00000552301	RPL7L1	Q6DKI1	246 aa	Known RBP	13.37	□□□□□ -0.27
PRPF40B-216	ENST00000552301	EXOC3-AS1	Q8N2X6	119 aa		13.37	□□□□□ -0.27
PRPF40B-216	ENST00000552301	NEU1	Q99519	415 aa		13.37	□□□□□ -0.27
PRPF40B-216	ENST00000552301	NUPR2	A6NF83	97 aa		13.36	□□□□□ -0.27
PRPF40B-216	ENST00000552301	TAAR5	O14804	337 aa		13.36	□□□□□ -0.27
PRPF40B-216	ENST00000552301	RBMY1A1	P0DJD3	496 aa	Known RBP	13.36	□□□□□ -0.27
PRPF40B-216	ENST00000552301	RBMY1C	P0DJD4	496 aa		13.36	□□□□□ -0.27
PRPF40B-216	ENST00000552301	CDC34	P49427	236 aa	Predicted RBP	13.36	□□□□□ -0.27
PRPF40B-216	ENST00000552301	SERF2	P84101	59 aa		13.36	□□□□□ -0.27
PRPF40B-216	ENST00000552301	ICAM4	Q14773	271 aa		13.36	□□□□□ -0.27
PRPF40B-216	ENST00000552301	RBMY1F	Q15415	496 aa	Known RBP	13.36	□□□□□ -0.27
PRPF40B-216	ENST00000552301	PQLC2	Q6ZP29	291 aa		13.36	□□□□□ -0.27
PRPF40B-216	ENST00000552301	BAP18	Q8IXM2	172 aa		13.36	□□□□□ -0.27
PRPF40B-216	ENST00000552301	PHYHIPL	Q96FC7	376 aa		13.36	□□□□□ -0.27
PRPF40B-216	ENST00000552301	TRAV12-2	A0A075B6T6	113 aa		13.35	□□□□□ -0.27
PRPF40B-216	ENST00000552301	TMEM189	A5PLL7	270 aa		13.35	□□□□□ -0.27
PRPF40B-216	ENST00000552301	CDKN1B	P46527	198 aa		13.35	□□□□□ -0.27
PRPF40B-216	ENST00000552301	CSN1S1	P47710	185 aa		13.35	□□□□□ -0.27
PRPF40B-216	ENST00000552301	NANOS2	P60321	138 aa	Known RBP	13.35	□□□□□ -0.27
PRPF40B-216	ENST00000552301	C1orf158	Q8N1D5	194 aa		13.35	□□□□□ -0.27
PRPF40B-216	ENST00000552301	SH3BGRL3	Q9H299	93 aa		13.35	□□□□□ -0.27
PRPF40B-216	ENST00000552301	EIF3G	O75821	320 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
PRPF40B-216	ENST00000552301	JTB	O76095	146 aa		13.34	□□□□□ -0.27
PRPF40B-216	ENST00000552301	RAN	P62826	216 aa	Known RBP	13.34	□□□□□ -0.27
PRPF40B-216	ENST00000552301	RRN3P1	Q2M238	152 aa		13.34	□□□□□ -0.27
PRPF40B-216	ENST00000552301	ZNF503	Q96F45	646 aa		13.34	□□□□□ -0.27
PRPF40B-216	ENST00000552301	NPIPB6	E9PJ23	425 aa		13.33	□□□□□ -0.28
PRPF40B-216	ENST00000552301	HMGB3	O15347	200 aa	Known RBP	13.33	□□□□□ -0.28
PRPF40B-216	ENST00000552301	CRX	O43186	299 aa	Predicted RBP	13.33	□□□□□ -0.28
PRPF40B-216	ENST00000552301	LEP	P41159	167 aa		13.33	□□□□□ -0.28
PRPF40B-216	ENST00000552301	EMP1	P54849	157 aa		13.33	□□□□□ -0.28
PRPF40B-216	ENST00000552301	ZNF345	Q14585	488 aa		13.33	□□□□□ -0.28
PRPF40B-216	ENST00000552301	LYPD1	Q8N2G4	141 aa		13.33	□□□□□ -0.28
PRPF40B-216	ENST00000552301	RPP25L	Q8N5L8	163 aa	Known RBP	13.33	□□□□□ -0.28
PRPF40B-216	ENST00000552301	ODF3	Q96PU9	254 aa		13.33	□□□□□ -0.28
PRPF40B-216	ENST00000552301		Q9H3A6	140 aa		13.33	□□□□□ -0.28
PRPF40B-216	ENST00000552301	KLK5	Q9Y337	293 aa	Predicted RBP	13.33	□□□□□ -0.28
PRPF40B-216	ENST00000552301	LOC102723971	A0A1B0GUV8	181 aa		13.32	□□□□□ -0.28
PRPF40B-216	ENST00000552301	TMEM256	Q8N2U0	113 aa		13.32	□□□□□ -0.28
PRPF40B-216	ENST00000552301	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.32	□□□□□ -0.28
PRPF40B-216	ENST00000552301	LINC01587	Q99440	93 aa		13.32	□□□□□ -0.28
PRPF40B-216	ENST00000552301	ARPC5L	Q9BPX5	153 aa		13.32	□□□□□ -0.28
PRPF40B-216	ENST00000552301	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.32	□□□□□ -0.28
PRPF40B-216	ENST00000552301	HMSD	A8MTL9	139 aa		13.31	□□□□□ -0.28
PRPF40B-216	ENST00000552301	FAM74A1	Q5RGS3	127 aa		13.31	□□□□□ -0.28
PRPF40B-216	ENST00000552301	AKR1C8P	Q5T2L2	129 aa		13.31	□□□□□ -0.28
PRPF40B-216	ENST00000552301	TMEM78	Q5T7P6	136 aa		13.31	□□□□□ -0.28
PRPF40B-216	ENST00000552301	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.31	□□□□□ -0.28
PRPF40B-216	ENST00000552301	RAB24	Q969Q5	203 aa		13.31	□□□□□ -0.28
PRPF40B-216	ENST00000552301	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.31	□□□□□ -0.28
PRPF40B-216	ENST00000552301	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.3	□□□□□ -0.28
PRPF40B-216	ENST00000552301		A0A0D9SG52	128 aa		13.3	□□□□□ -0.28
PRPF40B-216	ENST00000552301	TEX48	A0A1B0GUV7	120 aa		13.3	□□□□□ -0.28
PRPF40B-216	ENST00000552301		J3KRW8	73 aa		13.3	□□□□□ -0.28
PRPF40B-216	ENST00000552301	IGKV2D-40	P01614	121 aa	Predicted RBP	13.3	□□□□□ -0.28
PRPF40B-216	ENST00000552301	ARL14EPL	P0DKL9	152 aa		13.3	□□□□□ -0.28
PRPF40B-216	ENST00000552301	CT45A10	P0DMU9	189 aa		13.3	□□□□□ -0.28
PRPF40B-216	ENST00000552301	ERCC8	Q13216	396 aa		13.3	□□□□□ -0.28
PRPF40B-216	ENST00000552301	KCNRG	Q8N5I3	272 aa		13.3	□□□□□ -0.28
PRPF40B-216	ENST00000552301	CMTM2	Q8TAZ6	248 aa		13.3	□□□□□ -0.28
PRPF40B-216	ENST00000552301	LINC00477	Q96M19	166 aa		13.3	□□□□□ -0.28
PRPF40B-216	ENST00000552301	C20orf144	Q9BQM9	153 aa		13.3	□□□□□ -0.28
PRPF40B-216	ENST00000552301	KANTR	A0A1W2PQU2	76 aa		13.29	□□□□□ -0.28
PRPF40B-216	ENST00000552301	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.29	□□□□□ -0.28
PRPF40B-216	ENST00000552301	STAG3L2	P0CL84	134 aa		13.29	□□□□□ -0.28
PRPF40B-216	ENST00000552301	STAG3L3	P0CL85	134 aa		13.29	□□□□□ -0.28
PRPF40B-216	ENST00000552301	SPART-AS1	P0CW21	52 aa		13.29	□□□□□ -0.28
PRPF40B-216	ENST00000552301		Q6ZNX1	250 aa		13.29	□□□□□ -0.28
PRPF40B-216	ENST00000552301	IQCF2	Q8IXL9	164 aa		13.29	□□□□□ -0.28
PRPF40B-216	ENST00000552301	RXFP4	Q8TDU9	374 aa		13.29	□□□□□ -0.28
PRPF40B-216	ENST00000552301	OTOR	Q9NRC9	128 aa		13.29	□□□□□ -0.28
PRPF40B-216	ENST00000552301	CELA1	Q9UNI1	258 aa		13.29	□□□□□ -0.28
PRPF40B-216	ENST00000552301	C11orf94	C9JXX5	98 aa		13.28	□□□□□ -0.28
PRPF40B-216	ENST00000552301	TAS2R60	P59551	318 aa		13.28	□□□□□ -0.28
PRPF40B-216	ENST00000552301	GFI1B	Q5VTD9	330 aa		13.28	□□□□□ -0.28
PRPF40B-216	ENST00000552301	C9orf47	Q6ZRZ4	202 aa		13.28	□□□□□ -0.28

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