RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 TRIM63Q969Q1 353 aa14.74□□□□□ -0.05
SMARCD1-212ENST00000551966 SAT2Q96F10 170 aaPredicted RBP14.74□□□□□ -0.05
SMARCD1-212ENST00000551966 SMIM8Q96KF7 97 aa14.74□□□□□ -0.05
SMARCD1-212ENST00000551966 PYGO2Q9BRQ0 406 aa14.74□□□□□ -0.05
SMARCD1-212ENST00000551966 GSN-AS1Q9NRJ2 163 aa14.74□□□□□ -0.05
SMARCD1-212ENST00000551966 CCDC59Q9P031 241 aaKnown RBP14.74□□□□□ -0.05
SMARCD1-212ENST00000551966 A0A087WTM6 91 aa14.73□□□□□ -0.05
SMARCD1-212ENST00000551966 H3BQ15 152 aa14.73□□□□□ -0.05
SMARCD1-212ENST00000551966 C4orf46Q504U0 113 aa14.73□□□□□ -0.05
SMARCD1-212ENST00000551966 TEPPQ6URK8 271 aa14.73□□□□□ -0.05
SMARCD1-212ENST00000551966 TMEM14EPQ6UXP3 125 aa14.73□□□□□ -0.05
SMARCD1-212ENST00000551966 TMEM37Q8WXS4 190 aa14.73□□□□□ -0.05
SMARCD1-212ENST00000551966 SLC25A21Q9BQT8 299 aaPredicted RBP14.73□□□□□ -0.05
SMARCD1-212ENST00000551966 TRGV2A0A075B6R0 118 aa14.72□□□□□ -0.05
SMARCD1-212ENST00000551966 NPIPB6E9PJ23 425 aa14.72□□□□□ -0.05
SMARCD1-212ENST00000551966 FNDC10F2Z333 226 aa14.72□□□□□ -0.05
SMARCD1-212ENST00000551966 METTL15P1P0C7V9 234 aa14.72□□□□□ -0.05
SMARCD1-212ENST00000551966 IGLC2P0DOY2 106 aa14.72□□□□□ -0.05
SMARCD1-212ENST00000551966 FAUP35544 74 aaKnown RBP14.72□□□□□ -0.05
SMARCD1-212ENST00000551966 PXDC1Q5TGL8 231 aa14.72□□□□□ -0.05
SMARCD1-212ENST00000551966 BPIFA4PQ86YQ2 179 aa14.72□□□□□ -0.05
SMARCD1-212ENST00000551966 SLIRPQ9GZT3 109 aaKnown RBP14.72□□□□□ -0.05
SMARCD1-212ENST00000551966 RNF24Q9Y225 148 aa14.72□□□□□ -0.05
SMARCD1-212ENST00000551966 SSSCA1O60232 199 aa14.71□□□□□ -0.05
SMARCD1-212ENST00000551966 ZNF324O75467 553 aaPredicted RBP14.71□□□□□ -0.05
SMARCD1-212ENST00000551966 LEPP41159 167 aa14.71□□□□□ -0.05
SMARCD1-212ENST00000551966 ARL16Q0P5N6 197 aa14.71□□□□□ -0.05
SMARCD1-212ENST00000551966 TOMM5Q8N4H5 51 aa14.71□□□□□ -0.05
SMARCD1-212ENST00000551966 ODF3Q96PU9 254 aa14.71□□□□□ -0.05
SMARCD1-212ENST00000551966 FUT9Q9Y231 359 aa14.71□□□□□ -0.05
SMARCD1-212ENST00000551966 GOSR2O14653 212 aa14.7□□□□□ -0.06
SMARCD1-212ENST00000551966 AGPAT2O15120 278 aa14.7□□□□□ -0.06
SMARCD1-212ENST00000551966 IFNA5P01569 189 aa14.7□□□□□ -0.06
SMARCD1-212ENST00000551966 ICAM4Q14773 271 aa14.7□□□□□ -0.06
SMARCD1-212ENST00000551966 OPCMLQ14982 345 aa14.7□□□□□ -0.06
SMARCD1-212ENST00000551966 LYPD5Q6UWN5 251 aa14.7□□□□□ -0.06
SMARCD1-212ENST00000551966 KLF12Q9Y4X4 402 aa14.7□□□□□ -0.06
SMARCD1-212ENST00000551966 FLG2Q5D862 2391 aaPredicted RBP14.7□□□□□ -0.06
SMARCD1-212ENST00000551966 TRGV1A0A0A0MS02 117 aa14.69□□□□□ -0.06
SMARCD1-212ENST00000551966 OR10P1Q8NGE3 313 aa14.69□□□□□ -0.06
SMARCD1-212ENST00000551966 MCFD2Q8NI22 146 aa14.69□□□□□ -0.06
SMARCD1-212ENST00000551966 PXMP4Q9Y6I8 212 aa14.69□□□□□ -0.06
SMARCD1-212ENST00000551966 C9orf170A2RU37 121 aa14.68□□□□□ -0.06
SMARCD1-212ENST00000551966 PAX4O43316 350 aa14.68□□□□□ -0.06
SMARCD1-212ENST00000551966 SPINK4O60575 86 aa14.68□□□□□ -0.06
SMARCD1-212ENST00000551966 NFE4Q86UQ8 179 aa14.68□□□□□ -0.06
SMARCD1-212ENST00000551966 ICOSQ9Y6W8 199 aa14.68□□□□□ -0.06
SMARCD1-212ENST00000551966 SRRM2Q9UQ35 2752 aaKnown RBP14.68□□□□□ -0.06
SMARCD1-212ENST00000551966 TRAV5A0A0B4J249 113 aa14.67□□□□□ -0.06
SMARCD1-212ENST00000551966 SLC25A5P05141 298 aaKnown RBP14.67□□□□□ -0.06
SMARCD1-212ENST00000551966 AP3S2P59780 193 aa14.67□□□□□ -0.06
SMARCD1-212ENST00000551966 HAMPP81172 84 aa14.67□□□□□ -0.06
SMARCD1-212ENST00000551966 CD300CQ08708 224 aa14.67□□□□□ -0.06
SMARCD1-212ENST00000551966 ERCC8Q13216 396 aa14.67□□□□□ -0.06
SMARCD1-212ENST00000551966 ZNF546Q86UE3 836 aa14.67□□□□□ -0.06
SMARCD1-212ENST00000551966 RAB2BQ8WUD1 216 aa14.67□□□□□ -0.06
SMARCD1-212ENST00000551966 MGST2Q99735 147 aa14.67□□□□□ -0.06
SMARCD1-212ENST00000551966 LINC00467Q9BRT7 94 aa14.67□□□□□ -0.06
SMARCD1-212ENST00000551966 MRPS26Q9BYN8 205 aaKnown RBP14.67□□□□□ -0.06
SMARCD1-212ENST00000551966 MGAT4CQ9UBM8 478 aa14.67□□□□□ -0.06
SMARCD1-212ENST00000551966 COX7A2P2O60397 106 aa14.66□□□□□ -0.06
SMARCD1-212ENST00000551966 GCSHP23434 173 aa14.66□□□□□ -0.06
SMARCD1-212ENST00000551966 ANXA2RQ3ZCQ2 193 aa14.66□□□□□ -0.06
SMARCD1-212ENST00000551966 PYDC2Q56P42 97 aa14.66□□□□□ -0.06
SMARCD1-212ENST00000551966 C10orf113Q5VZT2 155 aa14.66□□□□□ -0.06
SMARCD1-212ENST00000551966 ZNF680Q8NEM1 530 aa14.66□□□□□ -0.06
SMARCD1-212ENST00000551966 FAM19A4Q96LR4 140 aa14.66□□□□□ -0.06
SMARCD1-212ENST00000551966 C7orf71A4D174 169 aa14.65□□□□□ -0.06
SMARCD1-212ENST00000551966 KLLNB2CW77 178 aa14.65□□□□□ -0.06
SMARCD1-212ENST00000551966 IGHV3-53P01767 116 aa14.65□□□□□ -0.06
SMARCD1-212ENST00000551966 TMBIM6P55061 237 aa14.65□□□□□ -0.06
SMARCD1-212ENST00000551966 EIF4E3Q8N5X7 224 aaKnown RBP14.65□□□□□ -0.06
SMARCD1-212ENST00000551966 ST6GAL2Q96JF0 529 aa14.65□□□□□ -0.06
SMARCD1-212ENST00000551966 PRAF2O60831 178 aa14.64□□□□□ -0.07
SMARCD1-212ENST00000551966 CRYBA4P53673 196 aa14.64□□□□□ -0.07
SMARCD1-212ENST00000551966 TCL1AP56279 114 aa14.64□□□□□ -0.07
SMARCD1-212ENST00000551966 BTN1A1Q13410 526 aa14.64□□□□□ -0.07
SMARCD1-212ENST00000551966 FHL2Q14192 279 aa14.64□□□□□ -0.07
SMARCD1-212ENST00000551966 DNAJC4Q9NNZ3 241 aa14.64□□□□□ -0.07
SMARCD1-212ENST00000551966 PRO0255Q9UI72 69 aa14.64□□□□□ -0.07
SMARCD1-212ENST00000551966 TP53TG3Q9ULZ0 132 aa14.64□□□□□ -0.07
SMARCD1-212ENST00000551966 V9GYH0 126 aa14.64□□□□□ -0.07
SMARCD1-212ENST00000551966 FAM229AH3BQW9 127 aa14.63□□□□□ -0.07
SMARCD1-212ENST00000551966 M0R3E3 92 aa14.63□□□□□ -0.07
SMARCD1-212ENST00000551966 TAS2R30P59541 319 aa14.63□□□□□ -0.07
SMARCD1-212ENST00000551966 UBE2MP61081 183 aaKnown RBP14.63□□□□□ -0.07
SMARCD1-212ENST00000551966 Q6ZQT7 251 aa14.63□□□□□ -0.07
SMARCD1-212ENST00000551966 AGPAT4-IT1Q9H0P7 198 aa14.63□□□□□ -0.07
SMARCD1-212ENST00000551966 HHLA3Q9XRX5 114 aa14.63□□□□□ -0.07
SMARCD1-212ENST00000551966 TSC22D2O75157 780 aa14.62□□□□□ -0.07
SMARCD1-212ENST00000551966 RNASE4P34096 147 aaKnown RBP14.62□□□□□ -0.07
SMARCD1-212ENST00000551966 GUK1Q16774 197 aa14.62□□□□□ -0.07
SMARCD1-212ENST00000551966 C8orf49Q96NF6 230 aa14.62□□□□□ -0.07
SMARCD1-212ENST00000551966 GGACTQ9BVM4 153 aa14.62□□□□□ -0.07
SMARCD1-212ENST00000551966 MRPL16Q9NX20 251 aaKnown RBP14.62□□□□□ -0.07
SMARCD1-212ENST00000551966 MSRB1Q9NZV6 116 aa14.62□□□□□ -0.07
SMARCD1-212ENST00000551966 FLVCR2Q9UPI3 526 aa14.62□□□□□ -0.07
SMARCD1-212ENST00000551966 RCL1Q9Y2P8 373 aaKnown RBP14.62□□□□□ -0.07
SMARCD1-212ENST00000551966 LY96Q9Y6Y9 160 aa14.62□□□□□ -0.07
SMARCD1-212ENST00000551966 TRAV9-2A0A087WT02 112 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms