RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 NDUFAF3Q9BU61 184 aa9.2□□□□□ -0.94
NPAS3-209ENST00000551008 NMES1Q9C002 83 aa9.2□□□□□ -0.94
NPAS3-209ENST00000551008 TEX48A0A1B0GUV7 120 aa9.19□□□□□ -0.94
NPAS3-209ENST00000551008 M0R3E3 92 aa9.19□□□□□ -0.94
NPAS3-209ENST00000551008 PYYP10082 97 aa9.19□□□□□ -0.94
NPAS3-209ENST00000551008 RHOBP62745 196 aa9.19□□□□□ -0.94
NPAS3-209ENST00000551008 FCN2Q15485 313 aa9.19□□□□□ -0.94
NPAS3-209ENST00000551008 LRRC37A5PQ49AS3 106 aa9.19□□□□□ -0.94
NPAS3-209ENST00000551008 GFI1BQ5VTD9 330 aa9.19□□□□□ -0.94
NPAS3-209ENST00000551008 Q6ZRG5 221 aa9.19□□□□□ -0.94
NPAS3-209ENST00000551008 STX12Q86Y82 276 aa9.19□□□□□ -0.94
NPAS3-209ENST00000551008 OR1L4Q8NGR5 311 aa9.19□□□□□ -0.94
NPAS3-209ENST00000551008 LRRC20Q8TCA0 184 aa9.19□□□□□ -0.94
NPAS3-209ENST00000551008 TMEM208Q9BTX3 173 aa9.19□□□□□ -0.94
NPAS3-209ENST00000551008 NPCDR1Q9BY65 106 aa9.19□□□□□ -0.94
NPAS3-209ENST00000551008 RNF24Q9Y225 148 aa9.19□□□□□ -0.94
NPAS3-209ENST00000551008 NPIPB6E9PJ23 425 aa9.18□□□□□ -0.94
NPAS3-209ENST00000551008 PRAF2O60831 178 aa9.18□□□□□ -0.94
NPAS3-209ENST00000551008 CT45A10P0DMU9 189 aa9.18□□□□□ -0.94
NPAS3-209ENST00000551008 HTN3P15516 51 aa9.18□□□□□ -0.94
NPAS3-209ENST00000551008 CDKN1BP46527 198 aa9.18□□□□□ -0.94
NPAS3-209ENST00000551008 DAD1P61803 113 aa9.18□□□□□ -0.94
NPAS3-209ENST00000551008 HBG1P69891 147 aa9.18□□□□□ -0.94
NPAS3-209ENST00000551008 HBG2P69892 147 aa9.18□□□□□ -0.94
NPAS3-209ENST00000551008 RAB31Q13636 194 aa9.18□□□□□ -0.94
NPAS3-209ENST00000551008 ATP6V1FQ16864 119 aa9.18□□□□□ -0.94
NPAS3-209ENST00000551008 TMEM88Q6PEY1 159 aa9.18□□□□□ -0.94
NPAS3-209ENST00000551008 POM121L12Q8N7R1 296 aa9.18□□□□□ -0.94
NPAS3-209ENST00000551008 OR5C1Q8NGR4 320 aa9.18□□□□□ -0.94
NPAS3-209ENST00000551008 THAP6Q8TBB0 222 aa9.18□□□□□ -0.94
NPAS3-209ENST00000551008 RNASE8Q8TDE3 154 aaKnown RBP9.18□□□□□ -0.94
NPAS3-209ENST00000551008 PFDN5Q99471 154 aa9.18□□□□□ -0.94
NPAS3-209ENST00000551008 SLC25A2Q9BXI2 301 aa9.18□□□□□ -0.94
NPAS3-209ENST00000551008 TMEM14CQ9P0S9 112 aa9.18□□□□□ -0.94
NPAS3-209ENST00000551008 TRBV19A0A075B6N1 114 aa9.17□□□□□ -0.94
NPAS3-209ENST00000551008 LYRM9A8MSI8 78 aa9.17□□□□□ -0.94
NPAS3-209ENST00000551008 E5RGE8 158 aa9.17□□□□□ -0.94
NPAS3-209ENST00000551008 ZNF253O75346 499 aa9.17□□□□□ -0.94
NPAS3-209ENST00000551008 TAS2R60P59551 318 aa9.17□□□□□ -0.94
NPAS3-209ENST00000551008 CLINT1Q14677 625 aa9.17□□□□□ -0.94
NPAS3-209ENST00000551008 MIR17HGQ75NE6 70 aa9.17□□□□□ -0.94
NPAS3-209ENST00000551008 PPP1R1CQ8WVI7 109 aa9.17□□□□□ -0.94
NPAS3-209ENST00000551008 FAM210BQ96KR6 192 aa9.17□□□□□ -0.94
NPAS3-209ENST00000551008 PKD1P98161 4303 aa9.17□□□□□ -0.94
NPAS3-209ENST00000551008 DYNC1H1Q14204 4646 aaKnown RBP9.16□□□□□ -0.94
NPAS3-209ENST00000551008 MPDU1O75352 247 aa9.16□□□□□ -0.94
NPAS3-209ENST00000551008 P0DMU3 169 aa9.16□□□□□ -0.94
NPAS3-209ENST00000551008 FAM231AP0DMU4 169 aa9.16□□□□□ -0.94
NPAS3-209ENST00000551008 FAM231CP0DMU5 169 aa9.16□□□□□ -0.94
NPAS3-209ENST00000551008 GUK1Q16774 197 aa9.16□□□□□ -0.94
NPAS3-209ENST00000551008 TMEM256Q8N2U0 113 aa9.16□□□□□ -0.94
NPAS3-209ENST00000551008 FAM19A4Q96LR4 140 aa9.16□□□□□ -0.94
NPAS3-209ENST00000551008 LINC01587Q99440 93 aa9.16□□□□□ -0.94
NPAS3-209ENST00000551008 WDR61Q9GZS3 305 aaKnown RBP9.16□□□□□ -0.94
NPAS3-209ENST00000551008 HERC2O95714 4834 aa9.15□□□□□ -0.94
NPAS3-209ENST00000551008 DEFB130BP0DP73 79 aa9.15□□□□□ -0.94
NPAS3-209ENST00000551008 DEFB130AP0DP74 79 aa9.15□□□□□ -0.94
NPAS3-209ENST00000551008 HIST1H1EP10412 219 aaKnown RBP9.15□□□□□ -0.94
NPAS3-209ENST00000551008 ERCC8Q13216 396 aa9.15□□□□□ -0.94
NPAS3-209ENST00000551008 EXOC3-AS1Q8N2X6 119 aa9.15□□□□□ -0.94
NPAS3-209ENST00000551008 LINC00612Q8N6U2 182 aa9.15□□□□□ -0.94
NPAS3-209ENST00000551008 OR10J6PQ8NGY7 276 aa9.15□□□□□ -0.94
NPAS3-209ENST00000551008 MRPL53Q96EL3 112 aaKnown RBP9.15□□□□□ -0.94
NPAS3-209ENST00000551008 ZNF503Q96F45 646 aa9.15□□□□□ -0.94
NPAS3-209ENST00000551008 ODF3Q96PU9 254 aa9.15□□□□□ -0.94
NPAS3-209ENST00000551008 DNAH11Q96DT5 4516 aa9.14□□□□□ -0.95
NPAS3-209ENST00000551008 A0A1B0GVY2 172 aa9.14□□□□□ -0.95
NPAS3-209ENST00000551008 RTL8CO15255 209 aa9.14□□□□□ -0.95
NPAS3-209ENST00000551008 MPC2O95563 127 aa9.14□□□□□ -0.95
NPAS3-209ENST00000551008 Q6ZR54 194 aa9.14□□□□□ -0.95
NPAS3-209ENST00000551008 TMEM263Q8WUH6 116 aaKnown RBP9.14□□□□□ -0.95
NPAS3-209ENST00000551008 C16orf74Q96GX8 76 aa9.14□□□□□ -0.95
NPAS3-209ENST00000551008 C20orf144Q9BQM9 153 aa9.14□□□□□ -0.95
NPAS3-209ENST00000551008 SLC25A31Q9H0C2 315 aa9.14□□□□□ -0.95
NPAS3-209ENST00000551008 PPP1R14DQ9NXH3 145 aa9.14□□□□□ -0.95
NPAS3-209ENST00000551008 HSPB11Q9Y547 144 aa9.14□□□□□ -0.95
NPAS3-209ENST00000551008 MUC4Q99102 2169 aa9.14□□□□□ -0.95
NPAS3-209ENST00000551008 H7BYZ3 331 aa9.13□□□□□ -0.95
NPAS3-209ENST00000551008 J3KRW8 73 aa9.13□□□□□ -0.95
NPAS3-209ENST00000551008 M0R2N4 97 aa9.13□□□□□ -0.95
NPAS3-209ENST00000551008 RLN2P04090 185 aa9.13□□□□□ -0.95
NPAS3-209ENST00000551008 HTN1P15515 57 aa9.13□□□□□ -0.95
NPAS3-209ENST00000551008 CYCSP99999 105 aaKnown RBP9.13□□□□□ -0.95
NPAS3-209ENST00000551008 PDE6HQ13956 83 aa9.13□□□□□ -0.95
NPAS3-209ENST00000551008 PRR9Q5T870 116 aa9.13□□□□□ -0.95
NPAS3-209ENST00000551008 Q6ZQT7 251 aa9.13□□□□□ -0.95
NPAS3-209ENST00000551008 FXYD5Q96DB9 178 aa9.13□□□□□ -0.95
NPAS3-209ENST00000551008 AGPAT4-IT1Q9H0P7 198 aa9.13□□□□□ -0.95
NPAS3-209ENST00000551008 WFDC1Q9HC57 220 aa9.13□□□□□ -0.95
NPAS3-209ENST00000551008 NOP10Q9NPE3 64 aaKnown RBP9.13□□□□□ -0.95
NPAS3-209ENST00000551008 IGKV2-40A0A087WW87 121 aaPredicted RBP9.12□□□□□ -0.95
NPAS3-209ENST00000551008 TRAV12-3A0A0B4J271 114 aa9.12□□□□□ -0.95
NPAS3-209ENST00000551008 KLLNB2CW77 178 aa9.12□□□□□ -0.95
NPAS3-209ENST00000551008 EIF3GO75821 320 aaKnown RBP eCLIP9.12□□□□□ -0.95
NPAS3-209ENST00000551008 IGKV2D-40P01614 121 aaPredicted RBP9.12□□□□□ -0.95
NPAS3-209ENST00000551008 CD300CQ08708 224 aa9.12□□□□□ -0.95
NPAS3-209ENST00000551008 ZNF493Q6ZR52 646 aa9.12□□□□□ -0.95
NPAS3-209ENST00000551008 ZFAND2AQ8N6M9 145 aa9.12□□□□□ -0.95
NPAS3-209ENST00000551008 BLNKQ8WV28 456 aa9.12□□□□□ -0.95
NPAS3-209ENST00000551008 PHYHIPLQ96FC7 376 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms