RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 ZNF738Q8NE65 137 aa9.97□□□□□ -0.81
ERBB3-215ENST00000550828 LYPD6BQ8NI32 183 aa9.97□□□□□ -0.81
ERBB3-215ENST00000550828 LRRC20Q8TCA0 184 aa9.97□□□□□ -0.81
ERBB3-215ENST00000550828 ZMAT5Q9UDW3 170 aaKnown RBP9.97□□□□□ -0.81
ERBB3-215ENST00000550828 DNAH9Q9NYC9 4486 aa9.97□□□□□ -0.81
ERBB3-215ENST00000550828 FAM74A7A6NL05 159 aa9.96□□□□□ -0.82
ERBB3-215ENST00000550828 NMBP08949 121 aa9.96□□□□□ -0.82
ERBB3-215ENST00000550828 IGHV4-30-4P0DP06 118 aa9.96□□□□□ -0.82
ERBB3-215ENST00000550828 RPUSD4Q96CM3 377 aaKnown RBP9.96□□□□□ -0.82
ERBB3-215ENST00000550828 SRD5A3Q9H8P0 318 aa9.96□□□□□ -0.82
ERBB3-215ENST00000550828 OTORQ9NRC9 128 aa9.96□□□□□ -0.82
ERBB3-215ENST00000550828 A0A0J9YX75 114 aa9.95□□□□□ -0.82
ERBB3-215ENST00000550828 PGPA6NDG6 321 aa9.95□□□□□ -0.82
ERBB3-215ENST00000550828 A8MTW9 85 aa9.95□□□□□ -0.82
ERBB3-215ENST00000550828 IFNA7P01567 189 aa9.95□□□□□ -0.82
ERBB3-215ENST00000550828 ATP5G3P48201 142 aa9.95□□□□□ -0.82
ERBB3-215ENST00000550828 GNG5P63218 68 aa9.95□□□□□ -0.82
ERBB3-215ENST00000550828 PSG9Q00887 426 aa9.95□□□□□ -0.82
ERBB3-215ENST00000550828 ACTL10Q5JWF8 245 aa9.95□□□□□ -0.82
ERBB3-215ENST00000550828 LYPD1Q8N2G4 141 aa9.95□□□□□ -0.82
ERBB3-215ENST00000550828 MRPL53Q96EL3 112 aaKnown RBP9.95□□□□□ -0.82
ERBB3-215ENST00000550828 SAV1Q9H4B6 383 aaPredicted RBP9.95□□□□□ -0.82
ERBB3-215ENST00000550828 IGKV2-40A0A087WW87 121 aaPredicted RBP9.94□□□□□ -0.82
ERBB3-215ENST00000550828 A0A1W2PRE2 83 aa9.94□□□□□ -0.82
ERBB3-215ENST00000550828 H3BMM0 161 aa9.94□□□□□ -0.82
ERBB3-215ENST00000550828 PAGE4O60829 102 aa9.94□□□□□ -0.82
ERBB3-215ENST00000550828 IGKV2D-40P01614 121 aaPredicted RBP9.94□□□□□ -0.82
ERBB3-215ENST00000550828 HBE1P02100 147 aa9.94□□□□□ -0.82
ERBB3-215ENST00000550828 HLA-DRB4P13762 266 aa9.94□□□□□ -0.82
ERBB3-215ENST00000550828 LINC00322Q6ZN03 302 aaPredicted RBP9.94□□□□□ -0.82
ERBB3-215ENST00000550828 FOXI2Q6ZQN5 318 aa9.94□□□□□ -0.82
ERBB3-215ENST00000550828 TRPT1Q86TN4 253 aaKnown RBP9.94□□□□□ -0.82
ERBB3-215ENST00000550828 HLA-DRB4X5D2U9 266 aa9.94□□□□□ -0.82
ERBB3-215ENST00000550828 HUWE1Q7Z6Z7 4374 aaKnown RBP9.93□□□□□ -0.82
ERBB3-215ENST00000550828 TEX46H3BTG2 121 aa9.93□□□□□ -0.82
ERBB3-215ENST00000550828 CMC4P56277 68 aaPredicted RBP9.93□□□□□ -0.82
ERBB3-215ENST00000550828 SUMO1P63165 101 aaKnown RBP9.93□□□□□ -0.82
ERBB3-215ENST00000550828 BLOC1S1P78537 153 aa9.93□□□□□ -0.82
ERBB3-215ENST00000550828 CCDC28AQ8IWP9 274 aa9.93□□□□□ -0.82
ERBB3-215ENST00000550828 OR8A1Q8NGG7 326 aa9.93□□□□□ -0.82
ERBB3-215ENST00000550828 AAMDCQ9H7C9 122 aa9.93□□□□□ -0.82
ERBB3-215ENST00000550828 GNG13Q9P2W3 67 aa9.93□□□□□ -0.82
ERBB3-215ENST00000550828 PRELID1Q9Y255 219 aa9.93□□□□□ -0.82
ERBB3-215ENST00000550828 A8MZ25 164 aa9.92□□□□□ -0.82
ERBB3-215ENST00000550828 DIRC3C9JPN6 131 aa9.92□□□□□ -0.82
ERBB3-215ENST00000550828 SLC25A5P05141 298 aaKnown RBP9.92□□□□□ -0.82
ERBB3-215ENST00000550828 GIG44P09565 113 aaPredicted RBP9.92□□□□□ -0.82
ERBB3-215ENST00000550828 RPL35AP18077 110 aaKnown RBP9.92□□□□□ -0.82
ERBB3-215ENST00000550828 CNN1P51911 297 aaKnown RBP9.92□□□□□ -0.82
ERBB3-215ENST00000550828 ERCC8Q13216 396 aa9.92□□□□□ -0.82
ERBB3-215ENST00000550828 AMTNQ6UX39 209 aa9.92□□□□□ -0.82
ERBB3-215ENST00000550828 VGLL1Q99990 258 aa9.92□□□□□ -0.82
ERBB3-215ENST00000550828 CLEC5AQ9NY25 188 aa9.92□□□□□ -0.82
ERBB3-215ENST00000550828 ARL2-SNX15V9GYD0 113 aa9.92□□□□□ -0.82
ERBB3-215ENST00000550828 NBEAL2Q6ZNJ1 2754 aa9.92□□□□□ -0.82
ERBB3-215ENST00000550828 NPIPB6E9PJ23 425 aa9.91□□□□□ -0.82
ERBB3-215ENST00000550828 IGKV3-20P01619 116 aa9.91□□□□□ -0.82
ERBB3-215ENST00000550828 FRMD6-AS1P0C7T7 363 aa9.91□□□□□ -0.82
ERBB3-215ENST00000550828 HIST1H1AQ02539 215 aaPredicted RBP9.91□□□□□ -0.82
ERBB3-215ENST00000550828 PMS2P11Q13670 270 aa9.91□□□□□ -0.82
ERBB3-215ENST00000550828 C5orf17Q8NAS9 161 aa9.91□□□□□ -0.82
ERBB3-215ENST00000550828 ASCL2Q99929 193 aa9.91□□□□□ -0.82
ERBB3-215ENST00000550828 RPH3ALQ9UNE2 315 aa9.91□□□□□ -0.82
ERBB3-215ENST00000550828 LOC102723971A0A1B0GUV8 181 aa9.9□□□□□ -0.82
ERBB3-215ENST00000550828 BCL2P10415 239 aa9.9□□□□□ -0.82
ERBB3-215ENST00000550828 HAGHQ16775 308 aa9.9□□□□□ -0.82
ERBB3-215ENST00000550828 CST9LP1Q5W188 147 aa9.9□□□□□ -0.82
ERBB3-215ENST00000550828 GOLT1AQ6ZVE7 132 aa9.9□□□□□ -0.82
ERBB3-215ENST00000550828 ZNF767PQ75MW2 155 aa9.9□□□□□ -0.82
ERBB3-215ENST00000550828 STHQ8IWL8 128 aa9.9□□□□□ -0.82
ERBB3-215ENST00000550828 MRAPQ8TCY5 172 aa9.9□□□□□ -0.82
ERBB3-215ENST00000550828 RARRES2Q99969 163 aa9.9□□□□□ -0.82
ERBB3-215ENST00000550828 AGPAT4-IT1Q9H0P7 198 aa9.9□□□□□ -0.82
ERBB3-215ENST00000550828 SLC35B3Q9H1N7 401 aa9.9□□□□□ -0.82
ERBB3-215ENST00000550828 TUBA4BQ9H853 241 aa9.9□□□□□ -0.82
ERBB3-215ENST00000550828 MANBALQ9NQG1 85 aa9.9□□□□□ -0.82
ERBB3-215ENST00000550828 EPDR1Q9UM22 224 aa9.9□□□□□ -0.82
ERBB3-215ENST00000550828 TENM3Q9P273 2699 aa9.89□□□□□ -0.83
ERBB3-215ENST00000550828 TRAV8-1A0A0A6YYK1 113 aa9.89□□□□□ -0.83
ERBB3-215ENST00000550828 SCO2A0A1W2PP80 73 aa9.89□□□□□ -0.83
ERBB3-215ENST00000550828 IGLV2-11P01706 119 aa9.89□□□□□ -0.83
ERBB3-215ENST00000550828 TCRAP04437 139 aa9.89□□□□□ -0.83
ERBB3-215ENST00000550828 CT45A10P0DMU9 189 aa9.89□□□□□ -0.83
ERBB3-215ENST00000550828 PPT1P50897 306 aa9.89□□□□□ -0.83
ERBB3-215ENST00000550828 FXYD7P58549 80 aa9.89□□□□□ -0.83
ERBB3-215ENST00000550828 EBLN2Q6P2I7 272 aa9.89□□□□□ -0.83
ERBB3-215ENST00000550828 C9orf47Q6ZRZ4 202 aa9.89□□□□□ -0.83
ERBB3-215ENST00000550828 OR4B1Q8NGF8 309 aa9.89□□□□□ -0.83
ERBB3-215ENST00000550828 Q8TAT8 98 aa9.89□□□□□ -0.83
ERBB3-215ENST00000550828 LINC00479Q96M42 142 aa9.89□□□□□ -0.83
ERBB3-215ENST00000550828 CLUHP3Q96NS8 147 aa9.89□□□□□ -0.83
ERBB3-215ENST00000550828 LOC102724200A0A096LPH7 203 aaPredicted RBP9.88□□□□□ -0.83
ERBB3-215ENST00000550828 C11orf94C9JXX5 98 aa9.88□□□□□ -0.83
ERBB3-215ENST00000550828 PEX7O00628 323 aa9.88□□□□□ -0.83
ERBB3-215ENST00000550828 RGS13O14921 159 aa9.88□□□□□ -0.83
ERBB3-215ENST00000550828 KIR3DS1Q14943 382 aa9.88□□□□□ -0.83
ERBB3-215ENST00000550828 ARL6IP6Q8N6S5 226 aa9.88□□□□□ -0.83
ERBB3-215ENST00000550828 OR10J6PQ8NGY7 276 aa9.88□□□□□ -0.83
ERBB3-215ENST00000550828 CMTM2Q8TAZ6 248 aa9.88□□□□□ -0.83
ERBB3-215ENST00000550828 RXFP4Q8TDU9 374 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms