RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 ARV1Q9H2C2 271 aa6.74□□□□□ -1.33
TRAFD1-207ENST00000550051 PSENENQ9NZ42 101 aa6.74□□□□□ -1.33
TRAFD1-207ENST00000550051 SMCO3A2RU48 225 aa6.73□□□□□ -1.33
TRAFD1-207ENST00000550051 PRAC2D3DTV9 90 aa6.73□□□□□ -1.33
TRAFD1-207ENST00000550051 CT45A10P0DMU9 189 aa6.73□□□□□ -1.33
TRAFD1-207ENST00000550051 AP3S2P59780 193 aa6.73□□□□□ -1.33
TRAFD1-207ENST00000550051 ERVFC1-1P60608 527 aa6.73□□□□□ -1.33
TRAFD1-207ENST00000550051 POLR2GP62487 172 aaKnown RBP eCLIP6.73□□□□□ -1.33
TRAFD1-207ENST00000550051 PPP1R1AQ13522 171 aa6.73□□□□□ -1.33
TRAFD1-207ENST00000550051 TEPPQ6URK8 271 aa6.73□□□□□ -1.33
TRAFD1-207ENST00000550051 TMEM14EPQ6UXP3 125 aa6.73□□□□□ -1.33
TRAFD1-207ENST00000550051 Q6ZTI0 123 aa6.73□□□□□ -1.33
TRAFD1-207ENST00000550051 NFE4Q86UQ8 179 aa6.73□□□□□ -1.33
TRAFD1-207ENST00000550051 BPIFA4PQ86YQ2 179 aa6.73□□□□□ -1.33
TRAFD1-207ENST00000550051 ZNF431Q8TF32 576 aaPredicted RBP6.73□□□□□ -1.33
TRAFD1-207ENST00000550051 DEDD2Q8WXF8 326 aa6.73□□□□□ -1.33
TRAFD1-207ENST00000550051 FRZBQ92765 325 aa6.73□□□□□ -1.33
TRAFD1-207ENST00000550051 SAT2Q96F10 170 aaPredicted RBP6.73□□□□□ -1.33
TRAFD1-207ENST00000550051 TMPRSS5Q9H3S3 457 aa6.73□□□□□ -1.33
TRAFD1-207ENST00000550051 CCDC59Q9P031 241 aaKnown RBP6.73□□□□□ -1.33
TRAFD1-207ENST00000550051 TRAV12-3A0A0B4J271 114 aa6.72□□□□□ -1.33
TRAFD1-207ENST00000550051 GOSR2O14653 212 aa6.72□□□□□ -1.33
TRAFD1-207ENST00000550051 IGLC2P0DOY2 106 aa6.72□□□□□ -1.33
TRAFD1-207ENST00000550051 PRB4P10163 310 aaPredicted RBP6.72□□□□□ -1.33
TRAFD1-207ENST00000550051 LEPP41159 167 aa6.72□□□□□ -1.33
TRAFD1-207ENST00000550051 UBE2MP61081 183 aaKnown RBP6.72□□□□□ -1.33
TRAFD1-207ENST00000550051 Q5VSD8 79 aa6.72□□□□□ -1.33
TRAFD1-207ENST00000550051 LINC00305Q7Z4B0 112 aa6.72□□□□□ -1.33
TRAFD1-207ENST00000550051 C11orf72Q8NBR9 251 aa6.72□□□□□ -1.33
TRAFD1-207ENST00000550051 OR10P1Q8NGE3 313 aa6.72□□□□□ -1.33
TRAFD1-207ENST00000550051 TRIM63Q969Q1 353 aa6.72□□□□□ -1.33
TRAFD1-207ENST00000550051 BCL7BQ9BQE9 202 aa6.72□□□□□ -1.33
TRAFD1-207ENST00000550051 LINC00467Q9BRT7 94 aa6.72□□□□□ -1.33
TRAFD1-207ENST00000550051 PARD6GQ9BYG4 376 aaPredicted RBP6.72□□□□□ -1.33
TRAFD1-207ENST00000550051 SLIRPQ9GZT3 109 aaKnown RBP6.72□□□□□ -1.33
TRAFD1-207ENST00000550051 PXMP4Q9Y6I8 212 aa6.72□□□□□ -1.33
TRAFD1-207ENST00000550051 TRGV2A0A075B6R0 118 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 A0A087WTM6 91 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 NPIPB6E9PJ23 425 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 H3BQ15 152 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 K7EP13 123 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 ZNF324O75467 553 aaPredicted RBP6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 IFNA5P01569 189 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 SLC25A5P05141 298 aaKnown RBP6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 FUSP35637 526 aaKnown RBP eCLIP6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 TMBIM6P55061 237 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 TAS2R30P59541 319 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 KRTAP10-1P60331 282 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 SLAQ13239 276 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 GUK1Q16774 197 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 ZNF546Q86UE3 836 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 TOMM5Q8N4H5 51 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 ZNF680Q8NEM1 530 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 RAB2BQ8WUD1 216 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 TMEM37Q8WXS4 190 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 GGACTQ9BVM4 153 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 GSN-AS1Q9NRJ2 163 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 TNFRSF18Q9Y5U5 241 aa6.71□□□□□ -1.34
TRAFD1-207ENST00000550051 TRAV9-2A0A087WT02 112 aa6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 LINC00854A0A1B0GVQ3 168 aa6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 C9orf170A2RU37 121 aa6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 SLC17A3O00476 420 aa6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 AGPAT2O15120 278 aa6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 PAX4O43316 350 aa6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 SPINK4O60575 86 aa6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 CCNKO75909 580 aa6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 NXPH4O95158 308 aa6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 SNRPCP09234 159 aaKnown RBP6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 METTL15P1P0C7V9 234 aa6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 RRAS2P62070 204 aaPredicted RBP6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 SLC38A11Q08AI6 406 aa6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 ANXA2RQ3ZCQ2 193 aa6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 LYPD5Q6UWN5 251 aa6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 MRPS26Q9BYN8 205 aaKnown RBP6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 DNAJC4Q9NNZ3 241 aa6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 MGAT4CQ9UBM8 478 aa6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 FUT9Q9Y231 359 aa6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 TMA7Q9Y2S6 64 aaKnown RBP6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 ICOSQ9Y6W8 199 aa6.7□□□□□ -1.34
TRAFD1-207ENST00000550051 KLLNB2CW77 178 aa6.69□□□□□ -1.34
TRAFD1-207ENST00000550051 SSSCA1O60232 199 aa6.69□□□□□ -1.34
TRAFD1-207ENST00000550051 TSC22D2O75157 780 aa6.69□□□□□ -1.34
TRAFD1-207ENST00000550051 ZNF253O75346 499 aa6.69□□□□□ -1.34
TRAFD1-207ENST00000550051 ICAM4Q14773 271 aa6.69□□□□□ -1.34
TRAFD1-207ENST00000550051 OPCMLQ14982 345 aa6.69□□□□□ -1.34
TRAFD1-207ENST00000550051 MORN5Q5VZ52 161 aa6.69□□□□□ -1.34
TRAFD1-207ENST00000550051 C10orf113Q5VZT2 155 aa6.69□□□□□ -1.34
TRAFD1-207ENST00000550051 MCFD2Q8NI22 146 aa6.69□□□□□ -1.34
TRAFD1-207ENST00000550051 MRPL53Q96EL3 112 aaKnown RBP6.69□□□□□ -1.34
TRAFD1-207ENST00000550051 FAM19A4Q96LR4 140 aa6.69□□□□□ -1.34
TRAFD1-207ENST00000550051 LINC00477Q96M19 166 aa6.69□□□□□ -1.34
TRAFD1-207ENST00000550051 PRO0255Q9UI72 69 aa6.69□□□□□ -1.34
TRAFD1-207ENST00000550051 HHLA3Q9XRX5 114 aa6.69□□□□□ -1.34
TRAFD1-207ENST00000550051 SRRM2Q9UQ35 2752 aaKnown RBP6.69□□□□□ -1.34
TRAFD1-207ENST00000550051 VPS13BQ7Z7G8 4022 aa6.68□□□□□ -1.34
TRAFD1-207ENST00000550051 TRGV1A0A0A0MS02 117 aa6.68□□□□□ -1.34
TRAFD1-207ENST00000550051 C7orf71A4D174 169 aa6.68□□□□□ -1.34
TRAFD1-207ENST00000550051 H3BTX0 84 aa6.68□□□□□ -1.34
TRAFD1-207ENST00000550051 J3KRW8 73 aa6.68□□□□□ -1.34
TRAFD1-207ENST00000550051 COX7A2P2O60397 106 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms