RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 CXCL2P19875 107 aa6.97□□□□□ -1.29
HDAC7-229ENST00000549883 RPL12P30050 165 aaKnown RBP6.97□□□□□ -1.29
HDAC7-229ENST00000549883 FAM222AQ5U5X8 452 aa6.97□□□□□ -1.29
HDAC7-229ENST00000549883 S100A7AQ86SG5 101 aa6.97□□□□□ -1.29
HDAC7-229ENST00000549883 EXOC3-AS1Q8N2X6 119 aa6.97□□□□□ -1.29
HDAC7-229ENST00000549883 BLNKQ8WV28 456 aa6.97□□□□□ -1.29
HDAC7-229ENST00000549883 ZNF503Q96F45 646 aa6.97□□□□□ -1.29
HDAC7-229ENST00000549883 ATP5SQ99766 215 aa6.97□□□□□ -1.29
HDAC7-229ENST00000549883 DKK2Q9UBU2 259 aa6.97□□□□□ -1.29
HDAC7-229ENST00000549883 TRBV19A0A075B6N1 114 aa6.96□□□□□ -1.3
HDAC7-229ENST00000549883 IGHV4-4A0A075B6R2 117 aa6.96□□□□□ -1.3
HDAC7-229ENST00000549883 DEFB131BA0A096LNP1 70 aa6.96□□□□□ -1.3
HDAC7-229ENST00000549883 TRAV10A0A0B4J240 114 aa6.96□□□□□ -1.3
HDAC7-229ENST00000549883 J3KRW8 73 aa6.96□□□□□ -1.3
HDAC7-229ENST00000549883 INSP01308 110 aa6.96□□□□□ -1.3
HDAC7-229ENST00000549883 OR10J4P0C629 311 aa6.96□□□□□ -1.3
HDAC7-229ENST00000549883 CT45A10P0DMU9 189 aa6.96□□□□□ -1.3
HDAC7-229ENST00000549883 ERCC8Q13216 396 aa6.96□□□□□ -1.3
HDAC7-229ENST00000549883 RRN3P1Q2M238 152 aa6.96□□□□□ -1.3
HDAC7-229ENST00000549883 TMEM208Q9BTX3 173 aa6.96□□□□□ -1.3
HDAC7-229ENST00000549883 TMEM14CQ9P0S9 112 aa6.96□□□□□ -1.3
HDAC7-229ENST00000549883 RNF24Q9Y225 148 aa6.96□□□□□ -1.3
HDAC7-229ENST00000549883 C11orf94C9JXX5 98 aa6.95□□□□□ -1.3
HDAC7-229ENST00000549883 NPIPB6E9PJ23 425 aa6.95□□□□□ -1.3
HDAC7-229ENST00000549883 AMBPP02760 352 aa6.95□□□□□ -1.3
HDAC7-229ENST00000549883 SPART-AS1P0CW21 52 aa6.95□□□□□ -1.3
HDAC7-229ENST00000549883 HIST1H1EP10412 219 aaKnown RBP6.95□□□□□ -1.3
HDAC7-229ENST00000549883 HTN1P15515 57 aa6.95□□□□□ -1.3
HDAC7-229ENST00000549883 FFAR4Q5NUL3 377 aa6.95□□□□□ -1.3
HDAC7-229ENST00000549883 GFI1BQ5VTD9 330 aa6.95□□□□□ -1.3
HDAC7-229ENST00000549883 FXYD5Q96DB9 178 aa6.95□□□□□ -1.3
HDAC7-229ENST00000549883 LINC01587Q99440 93 aa6.95□□□□□ -1.3
HDAC7-229ENST00000549883 MED28Q9H204 178 aa6.95□□□□□ -1.3
HDAC7-229ENST00000549883 PPP1R14DQ9NXH3 145 aa6.95□□□□□ -1.3
HDAC7-229ENST00000549883 IGKV2-40A0A087WW87 121 aaPredicted RBP6.94□□□□□ -1.3
HDAC7-229ENST00000549883 ZNF253O75346 499 aa6.94□□□□□ -1.3
HDAC7-229ENST00000549883 IGKV2D-40P01614 121 aaPredicted RBP6.94□□□□□ -1.3
HDAC7-229ENST00000549883 HTN3P15516 51 aa6.94□□□□□ -1.3
HDAC7-229ENST00000549883 CDKN1BP46527 198 aa6.94□□□□□ -1.3
HDAC7-229ENST00000549883 ICAM4Q14773 271 aa6.94□□□□□ -1.3
HDAC7-229ENST00000549883 GUK1Q16774 197 aa6.94□□□□□ -1.3
HDAC7-229ENST00000549883 LGALS9CQ6DKI2 356 aa6.94□□□□□ -1.3
HDAC7-229ENST00000549883 Q6ZQT7 251 aa6.94□□□□□ -1.3
HDAC7-229ENST00000549883 OR10J6PQ8NGY7 276 aa6.94□□□□□ -1.3
HDAC7-229ENST00000549883 PHYHIPLQ96FC7 376 aa6.94□□□□□ -1.3
HDAC7-229ENST00000549883 NIPSNAP3BQ9BS92 247 aa6.94□□□□□ -1.3
HDAC7-229ENST00000549883 OR51M1Q9H341 326 aa6.94□□□□□ -1.3
HDAC7-229ENST00000549883 FUT9Q9Y231 359 aa6.94□□□□□ -1.3
HDAC7-229ENST00000549883 TIMM9Q9Y5J7 89 aa6.94□□□□□ -1.3
HDAC7-229ENST00000549883 TRAV12-3A0A0B4J271 114 aa6.93□□□□□ -1.3
HDAC7-229ENST00000549883 TMEM189A5PLL7 270 aa6.93□□□□□ -1.3
HDAC7-229ENST00000549883 NBEAP1P0C6P0 100 aa6.93□□□□□ -1.3
HDAC7-229ENST00000549883 PET100P0DJ07 73 aa6.93□□□□□ -1.3
HDAC7-229ENST00000549883 RAB2AP61019 212 aa6.93□□□□□ -1.3
HDAC7-229ENST00000549883 FAM122CQ6P4D5 195 aa6.93□□□□□ -1.3
HDAC7-229ENST00000549883 SCGB1C1Q8TD33 95 aa6.93□□□□□ -1.3
HDAC7-229ENST00000549883 VGLL1Q99990 258 aa6.93□□□□□ -1.3
HDAC7-229ENST00000549883 PAXXQ9BUH6 204 aa6.93□□□□□ -1.3
HDAC7-229ENST00000549883 AGPAT4-IT1Q9H0P7 198 aa6.93□□□□□ -1.3
HDAC7-229ENST00000549883 NACAE9PAV3 2078 aa6.92□□□□□ -1.3
HDAC7-229ENST00000549883 C17orf112F2Z3M2 114 aa6.92□□□□□ -1.3
HDAC7-229ENST00000549883 G3V3Q6 166 aa6.92□□□□□ -1.3
HDAC7-229ENST00000549883 HMGB3O15347 200 aaKnown RBP6.92□□□□□ -1.3
HDAC7-229ENST00000549883 OR7C2O60412 319 aa6.92□□□□□ -1.3
HDAC7-229ENST00000549883 IFNA5P01569 189 aa6.92□□□□□ -1.3
HDAC7-229ENST00000549883 TAS2R60P59551 318 aa6.92□□□□□ -1.3
HDAC7-229ENST00000549883 CD300CQ08708 224 aa6.92□□□□□ -1.3
HDAC7-229ENST00000549883 PRR9Q5T870 116 aa6.92□□□□□ -1.3
HDAC7-229ENST00000549883 RNF141Q8WVD5 230 aa6.92□□□□□ -1.3
HDAC7-229ENST00000549883 FAM19A4Q96LR4 140 aa6.92□□□□□ -1.3
HDAC7-229ENST00000549883 MRPL32Q9BYC8 188 aaKnown RBP6.92□□□□□ -1.3
HDAC7-229ENST00000549883 VPS13DQ5THJ4 4388 aa6.92□□□□□ -1.3
HDAC7-229ENST00000549883 DEFB130BP0DP73 79 aa6.91□□□□□ -1.3
HDAC7-229ENST00000549883 DEFB130AP0DP74 79 aa6.91□□□□□ -1.3
HDAC7-229ENST00000549883 TSPOP30536 169 aa6.91□□□□□ -1.3
HDAC7-229ENST00000549883 DAD1P61803 113 aa6.91□□□□□ -1.3
HDAC7-229ENST00000549883 RANP62826 216 aaKnown RBP6.91□□□□□ -1.3
HDAC7-229ENST00000549883 BTN1A1Q13410 526 aa6.91□□□□□ -1.3
HDAC7-229ENST00000549883 PDE6HQ13956 83 aa6.91□□□□□ -1.3
HDAC7-229ENST00000549883 Q8TAT8 98 aa6.91□□□□□ -1.3
HDAC7-229ENST00000549883 RNASE8Q8TDE3 154 aaKnown RBP6.91□□□□□ -1.3
HDAC7-229ENST00000549883 MRPL53Q96EL3 112 aaKnown RBP6.91□□□□□ -1.3
HDAC7-229ENST00000549883 SH3BGRL3Q9H299 93 aa6.91□□□□□ -1.3
HDAC7-229ENST00000549883 KCNIP2Q9NS61 270 aa6.91□□□□□ -1.3
HDAC7-229ENST00000549883 KMT2AQ03164 3969 aa6.91□□□□□ -1.3
HDAC7-229ENST00000549883 RNF222A6NCQ9 220 aa6.9□□□□□ -1.3
HDAC7-229ENST00000549883 SMLR1H3BR10 107 aa6.9□□□□□ -1.3
HDAC7-229ENST00000549883 H7BYZ3 331 aa6.9□□□□□ -1.3
HDAC7-229ENST00000549883 GIPP09681 153 aaPredicted RBP6.9□□□□□ -1.3
HDAC7-229ENST00000549883 RNASE4P34096 147 aaKnown RBP6.9□□□□□ -1.3
HDAC7-229ENST00000549883 LEPP41159 167 aa6.9□□□□□ -1.3
HDAC7-229ENST00000549883 TCTAP57738 103 aa6.9□□□□□ -1.3
HDAC7-229ENST00000549883 UBE2L3P68036 154 aaKnown RBP6.9□□□□□ -1.3
HDAC7-229ENST00000549883 OXA1LQ15070 435 aa6.9□□□□□ -1.3
HDAC7-229ENST00000549883 RGS21Q2M5E4 152 aa6.9□□□□□ -1.3
HDAC7-229ENST00000549883 TMEM88Q6PEY1 159 aa6.9□□□□□ -1.3
HDAC7-229ENST00000549883 C9orf47Q6ZRZ4 202 aa6.9□□□□□ -1.3
HDAC7-229ENST00000549883 TMEM256Q8N2U0 113 aa6.9□□□□□ -1.3
HDAC7-229ENST00000549883 ZFAND2AQ8N6M9 145 aa6.9□□□□□ -1.3
HDAC7-229ENST00000549883 HSD17B11Q8NBQ5 300 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms