RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 PDZD11Q5EBL8 140 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 BPIFA4PQ86YQ2 179 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 SVBPQ8N300 66 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 Q8WTZ3 238 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 UPK3BQ9BT76 320 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 FZR1Q9UM11 496 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 RNF114Q9Y508 228 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 PLAC8L1A1L4L8 177 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 C2orf70A6NJV1 201 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 GGTLC3B5MD39 225 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 FGF7P21781 194 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 HOXD3P31249 432 aaPredicted RBP3.59□□□□□ -1.83
SCAF11-212ENST00000549162 HOXA4Q00056 320 aaPredicted RBP3.59□□□□□ -1.83
SCAF11-212ENST00000549162 C10orf113Q5VZT2 155 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 C11orf72Q8NBR9 251 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 OR4C5Q8NGB2 326 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 USP24Q9UPU5 2620 aa3.59□□□□□ -1.84
SCAF11-212ENST00000549162 NUPL2O15504 423 aaKnown RBP3.59□□□□□ -1.84
SCAF11-212ENST00000549162 RS1O15537 224 aa3.59□□□□□ -1.84
SCAF11-212ENST00000549162 PPP1R17O96001 155 aa3.59□□□□□ -1.84
SCAF11-212ENST00000549162 KRASP01116 189 aa3.59□□□□□ -1.84
SCAF11-212ENST00000549162 LINC00315P59091 139 aa3.59□□□□□ -1.84
SCAF11-212ENST00000549162 GNB1P62873 340 aa3.59□□□□□ -1.84
SCAF11-212ENST00000549162 USF2Q15853 346 aaPredicted RBP3.59□□□□□ -1.84
SCAF11-212ENST00000549162 MRAP2Q96G30 205 aa3.59□□□□□ -1.84
SCAF11-212ENST00000549162 ENY2Q9NPA8 101 aa3.59□□□□□ -1.84
SCAF11-212ENST00000549162 IL36BQ9NZH7 164 aa3.59□□□□□ -1.84
SCAF11-212ENST00000549162 DMXL1Q9Y485 3027 aa3.59□□□□□ -1.84
SCAF11-212ENST00000549162 PSG1P11464 419 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 C9orf66Q5T8R8 295 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 RUSC1-AS1Q66K80 236 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 Q6ZSN1 163 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 TSKUQ8WUA8 353 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 RPH3ALQ9UNE2 315 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 A0A1W2PPE3 182 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 MAP1LC3B2A6NCE7 125 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 PGPA6NDG6 321 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 SPINK4O60575 86 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 PMCHP20382 165 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 CNTFRP26992 372 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 EDDM3BP56851 147 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 RPL19P84098 196 aaKnown RBP3.58□□□□□ -1.84
SCAF11-212ENST00000549162 TMEM97Q5BJF2 176 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 SBSPONQ8IVN8 264 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 OR9G4Q8NGQ1 327 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 ZNF418Q8TF45 676 aaPredicted RBP3.58□□□□□ -1.84
SCAF11-212ENST00000549162 MAP1LC3BQ9GZQ8 125 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 CBY1Q9Y3M2 126 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 PYGO1Q9Y3Y4 419 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 YTHDF2Q9Y5A9 579 aaKnown RBP3.58□□□□□ -1.84
SCAF11-212ENST00000549162 ZNF407Q9C0G0 2248 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 PEX7O00628 323 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 SIVA1O15304 175 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 OR7C2O60412 319 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 PKIAP61925 76 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 OR10W1Q8NGF6 305 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 OR10J6PQ8NGY7 276 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 SCGB1C1Q8TD33 95 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 RASL10AQ92737 203 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 TVP23CQ96ET8 276 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 C20orf78Q9BR46 151 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 TM2D3Q9BRN9 247 aa3.58□□□□□ -1.84
SCAF11-212ENST00000549162 PPBPP02775 128 aa3.57□□□□□ -1.84
SCAF11-212ENST00000549162 GIG44P09565 113 aaPredicted RBP3.57□□□□□ -1.84
SCAF11-212ENST00000549162 SIGLECL1Q8N7X8 197 aa3.57□□□□□ -1.84
SCAF11-212ENST00000549162 OR5B12Q96R08 314 aa3.57□□□□□ -1.84
SCAF11-212ENST00000549162 MAP6D1Q9H9H5 199 aa3.57□□□□□ -1.84
SCAF11-212ENST00000549162 DNAH10Q8IVF4 4471 aa3.57□□□□□ -1.84
SCAF11-212ENST00000549162 BAHCC1Q9P281 2608 aa3.57□□□□□ -1.84
SCAF11-212ENST00000549162 EYSQ5T1H1 3165 aa3.57□□□□□ -1.84
SCAF11-212ENST00000549162 IGLV5-45A0A087WSX0 123 aa3.57□□□□□ -1.84
SCAF11-212ENST00000549162 C7orf71A4D174 169 aa3.57□□□□□ -1.84
SCAF11-212ENST00000549162 HOXA5P20719 270 aa3.57□□□□□ -1.84
SCAF11-212ENST00000549162 RPL23P62829 140 aaKnown RBP3.57□□□□□ -1.84
SCAF11-212ENST00000549162 MRPS36P82909 103 aaKnown RBP3.57□□□□□ -1.84
SCAF11-212ENST00000549162 MAFIPQ8WZ33 124 aa3.57□□□□□ -1.84
SCAF11-212ENST00000549162 ARL6Q9H0F7 186 aa3.57□□□□□ -1.84
SCAF11-212ENST00000549162 MT-ND4LP03901 98 aa3.57□□□□□ -1.84
SCAF11-212ENST00000549162 NHLRC4P0CG21 123 aaPredicted RBP3.57□□□□□ -1.84
SCAF11-212ENST00000549162 NRN1Q9NPD7 142 aa3.57□□□□□ -1.84
SCAF11-212ENST00000549162 TRAV40A0A0B4J280 105 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 ARPC5O15511 151 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 ZNHIT1O43257 154 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 GALR1P47211 349 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 PLGLAQ15195 96 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 SP6Q3SY56 376 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 TIGITQ495A1 244 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 FAM74A1Q5RGS3 127 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 AVPI1Q5T686 147 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 FAM53AQ6NSI3 398 aaPredicted RBP3.56□□□□□ -1.84
SCAF11-212ENST00000549162 SH2D6Q7Z4S9 175 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 WFDC11Q8NEX6 87 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 CHCHD1Q96BP2 118 aaKnown RBP3.56□□□□□ -1.84
SCAF11-212ENST00000549162 TMEM191AQ9H0A3 160 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 NCOR1O75376 2440 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 TRBV10-1A0A0K0K1A3 114 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 MEIS3P1A6NDR6 274 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 H3BTX0 84 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 S100A8P05109 93 aa3.56□□□□□ -1.84
SCAF11-212ENST00000549162 RD3LP0DJH9 198 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms