RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, human

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL3-215	ENST00000546102	MRPL55	Q7Z7F7	128 aa	Known RBP	2.57	□□□□□ -2
CUL3-215	ENST00000546102	NKAPP1	Q8N9T2	125 aa		2.57	□□□□□ -2
CUL3-215	ENST00000546102	LFNG	Q8NES3	379 aa		2.57	□□□□□ -2
CUL3-215	ENST00000546102	OR2G3	Q8NGZ4	309 aa		2.57	□□□□□ -2
CUL3-215	ENST00000546102	RPUSD4	Q96CM3	377 aa	Known RBP	2.57	□□□□□ -2
CUL3-215	ENST00000546102	OR4C12	Q96R67	309 aa		2.57	□□□□□ -2
CUL3-215	ENST00000546102	KIR2DL4	Q99706	377 aa		2.57	□□□□□ -2
CUL3-215	ENST00000546102	PSMG3	Q9BT73	122 aa	Predicted RBP	2.57	□□□□□ -2
CUL3-215	ENST00000546102	NPCDR1	Q9BY65	106 aa		2.57	□□□□□ -2
CUL3-215	ENST00000546102	ARV1	Q9H2C2	271 aa		2.57	□□□□□ -2
CUL3-215	ENST00000546102	PARP11	Q9NR21	331 aa		2.57	□□□□□ -2
CUL3-215	ENST00000546102	NDUFA4L2	Q9NRX3	87 aa		2.57	□□□□□ -2
CUL3-215	ENST00000546102	MED9	Q9NWA0	146 aa		2.57	□□□□□ -2
CUL3-215	ENST00000546102		Q9UF83	564 aa		2.57	□□□□□ -2
CUL3-215	ENST00000546102	SIGLEC9	Q9Y336	463 aa		2.57	□□□□□ -2
CUL3-215	ENST00000546102	TIMM9	Q9Y5J7	89 aa		2.57	□□□□□ -2
CUL3-215	ENST00000546102	URGCP-MRPS24	S4R325	110 aa		2.57	□□□□□ -2
CUL3-215	ENST00000546102	AKAP9	Q99996	3911 aa		2.57	□□□□□ -2
CUL3-215	ENST00000546102	CHD6	Q8TD26	2715 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	SPTAN1	Q13813	2472 aa	Known RBP	2.56	□□□□□ -2
CUL3-215	ENST00000546102		A0A087WYN8	130 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	TRAV3	A0A0B4J244	114 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	CENPVL3	A0A0U1RRI6	287 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	TEX50	A0A1B0GTY4	177 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102		H7C1H1	209 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102		M0QZK8	103 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	FGF16	O43320	207 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	NDUFA3	O95167	84 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	CA2	P00918	260 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	IFNA1	P01562	189 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	IGHV3-23	P01764	117 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	S100A6	P06703	90 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	NMB	P08949	121 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	RAB5A	P20339	215 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	ZP3	P21754	424 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	ATP6V0C	P27449	155 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	OPRK1	P41145	380 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	UBE2G2	P60604	165 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	SERF2	P84101	59 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	LRRC75B	Q2VPJ9	315 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	BSX	Q3C1V8	233 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	C5orf47	Q569G3	176 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	SLC16A13	Q7RTY0	426 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	ZNF329	Q86UD4	541 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	TMEM61	Q8N0U2	210 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	NPB	Q8NG41	125 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	OR1N2	Q8NGR9	330 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	FAM213B	Q8TBF2	198 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	RNASEH2C	Q8TDP1	164 aa	Known RBP	2.56	□□□□□ -2
CUL3-215	ENST00000546102	SRSF12	Q8WXF0	261 aa	Known RBP	2.56	□□□□□ -2
CUL3-215	ENST00000546102	RBMXL1	Q96E39	390 aa	Known RBP	2.56	□□□□□ -2
CUL3-215	ENST00000546102	SLC35E1	Q96K37	410 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	VGLL1	Q99990	258 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	RASL11B	Q9BPW5	248 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	PBDC1	Q9BVG4	233 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	WDR61	Q9GZS3	305 aa	Known RBP	2.56	□□□□□ -2
CUL3-215	ENST00000546102	SH3BGRL3	Q9H299	93 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	FBXL15	Q9H469	300 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	SLC25A22	Q9H936	323 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	WFDC1	Q9HC57	220 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	MMP26	Q9NRE1	261 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	ZFHX3	Q15911	3703 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	YLPM1	P49750	1951 aa	Known RBP	2.56	□□□□□ -2
CUL3-215	ENST00000546102	MALRD1	Q5VYJ5	2156 aa		2.56	□□□□□ -2
CUL3-215	ENST00000546102	TENM4	Q6N022	2769 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	FBN2	P35556	2912 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102		A0A096LNT2	108 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	IGLC7	A0M8Q6	106 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	KRBOX1	C9JBD0	128 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	MT-CO2	P00403	227 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	HLA-DRB1	P01911	266 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	FABP1	P07148	127 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	OR13C7	P0DN81	318 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	RNASE2	P10153	161 aa	Known RBP	2.55	□□□□□ -2
CUL3-215	ENST00000546102	DEFA4	P12838	97 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	M6PR	P20645	277 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	CNTFR	P26992	372 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	FGF8	P55075	233 aa	Predicted RBP	2.55	□□□□□ -2
CUL3-215	ENST00000546102	TAS2R60	P59551	318 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	KRTAP10-5	P60370	271 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	B2M	P61769	119 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	RUNX1	Q01196	453 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	WT1-AS	Q06250	92 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	EBI3	Q14213	229 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	FXYD3	Q14802	87 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	TMEM249	Q2WGJ8	235 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	ACOT6	Q3I5F7	207 aa	Predicted RBP	2.55	□□□□□ -2
CUL3-215	ENST00000546102	C10orf55	Q5SWW7	151 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	CRYBG3	Q68DQ2	2970 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	CYB5R2	Q6BCY4	276 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	BRD3OS	Q6XYD6	125 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	S100A7A	Q86SG5	101 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	BOD1L2	Q8IYS8	172 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	SLC7A5P1	Q8MH63	180 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	EIF4E3	Q8N5X7	224 aa	Known RBP	2.55	□□□□□ -2
CUL3-215	ENST00000546102		Q8N6K4	173 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	OR10W1	Q8NGF6	305 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	OR1P1	Q8NH06	330 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	ACY3	Q96HD9	319 aa		2.55	□□□□□ -2
CUL3-215	ENST00000546102	NARS2	Q96I59	477 aa	Known RBP	2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms