RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 ZNF329Q86UD4 541 aa9.51□□□□□ -0.89
CIT-217ENST00000545913 C1orf159Q96HA4 380 aa9.51□□□□□ -0.89
CIT-217ENST00000545913 CRIM1Q9NZV1 1036 aa9.51□□□□□ -0.89
CIT-217ENST00000545913 TMEM158Q8WZ71 300 aa9.51□□□□□ -0.89
CIT-217ENST00000545913 BDP1A6H8Y1 2624 aa9.51□□□□□ -0.89
CIT-217ENST00000545913 RIPPLY3P57055 190 aa9.51□□□□□ -0.89
CIT-217ENST00000545913 ZNF562Q6V9R5 426 aa9.51□□□□□ -0.89
CIT-217ENST00000545913 Q6ZS92 163 aa9.51□□□□□ -0.89
CIT-217ENST00000545913 LIME1Q9H400 295 aa9.51□□□□□ -0.89
CIT-217ENST00000545913 KLF12Q9Y4X4 402 aa9.51□□□□□ -0.89
CIT-217ENST00000545913 RNASE2P10153 161 aaKnown RBP9.51□□□□□ -0.89
CIT-217ENST00000545913 FXYD7P58549 80 aa9.51□□□□□ -0.89
CIT-217ENST00000545913 NUP210LQ5VU65 1888 aa9.51□□□□□ -0.89
CIT-217ENST00000545913 OTOGLQ3ZCN5 2332 aa9.51□□□□□ -0.89
CIT-217ENST00000545913 IGHG3P01860 377 aa9.5□□□□□ -0.89
CIT-217ENST00000545913 ESDP10768 282 aa9.5□□□□□ -0.89
CIT-217ENST00000545913 C2orf82Q6UX34 121 aa9.5□□□□□ -0.89
CIT-217ENST00000545913 MRPL52Q86TS9 123 aaKnown RBP9.5□□□□□ -0.89
CIT-217ENST00000545913 RHPN1-AS1Q9BWJ2 59 aa9.5□□□□□ -0.89
CIT-217ENST00000545913 TMEM14BQ9NUH8 114 aa9.5□□□□□ -0.89
CIT-217ENST00000545913 B3GALT5-AS1P59052 145 aa9.5□□□□□ -0.89
CIT-217ENST00000545913 BPESC1Q9GZL8 116 aa9.5□□□□□ -0.89
CIT-217ENST00000545913 UNQ6494/PRO21346Q6UXR6 183 aa9.5□□□□□ -0.89
CIT-217ENST00000545913 IGKV1-16P04430 117 aa9.5□□□□□ -0.89
CIT-217ENST00000545913 HIST1H4AP62805 103 aaKnown RBP9.5□□□□□ -0.89
CIT-217ENST00000545913 TRPT1Q86TN4 253 aaKnown RBP9.5□□□□□ -0.89
CIT-217ENST00000545913 PRTN3P24158 256 aa9.5□□□□□ -0.89
CIT-217ENST00000545913 ARHGAP32A7KAX9 2087 aa9.5□□□□□ -0.89
CIT-217ENST00000545913 DMRTC2Q8IXT2 367 aaPredicted RBP9.5□□□□□ -0.89
CIT-217ENST00000545913 LY6G5BQ8NDX9 201 aa9.49□□□□□ -0.89
CIT-217ENST00000545913 DEFB121Q5J5C9 76 aa9.49□□□□□ -0.89
CIT-217ENST00000545913 SHANK2-AS3Q9BTD1 123 aa9.49□□□□□ -0.89
CIT-217ENST00000545913 A0A087X0K7 114 aa9.49□□□□□ -0.89
CIT-217ENST00000545913 hDV102S1A0JD36 115 aa9.49□□□□□ -0.89
CIT-217ENST00000545913 PRIMA1Q86XR5 153 aa9.49□□□□□ -0.89
CIT-217ENST00000545913 INS-IGF2F8WCM5 200 aa9.49□□□□□ -0.89
CIT-217ENST00000545913 IGHV3-53P01767 116 aa9.49□□□□□ -0.89
CIT-217ENST00000545913 Q86TA4 180 aa9.49□□□□□ -0.89
CIT-217ENST00000545913 RHODO00212 210 aa9.48□□□□□ -0.89
CIT-217ENST00000545913 IL17RELQ6ZVW7 336 aa9.48□□□□□ -0.89
CIT-217ENST00000545913 A0A1W2PPI3 338 aa9.48□□□□□ -0.89
CIT-217ENST00000545913 HGFACQ04756 655 aa9.48□□□□□ -0.89
CIT-217ENST00000545913 PRB4P10163 310 aaPredicted RBP9.48□□□□□ -0.89
CIT-217ENST00000545913 LYPD2Q6UXB3 125 aa9.48□□□□□ -0.89
CIT-217ENST00000545913 FOXL2NBQ6ZUU3 175 aa9.48□□□□□ -0.89
CIT-217ENST00000545913 AMN1Q8IY45 258 aa9.48□□□□□ -0.89
CIT-217ENST00000545913 BMPERQ8N8U9 685 aa9.48□□□□□ -0.89
CIT-217ENST00000545913 UBE2E1P51965 193 aa9.48□□□□□ -0.89
CIT-217ENST00000545913 UBE2E2Q96LR5 201 aa9.47□□□□□ -0.89
CIT-217ENST00000545913 E7EQL1 145 aa9.47□□□□□ -0.89
CIT-217ENST00000545913 CFPP27918 469 aa9.47□□□□□ -0.89
CIT-217ENST00000545913 A0A087WWL8 130 aa9.47□□□□□ -0.89
CIT-217ENST00000545913 MSMBP08118 114 aa9.47□□□□□ -0.89
CIT-217ENST00000545913 CT83Q5H943 113 aa9.47□□□□□ -0.89
CIT-217ENST00000545913 SELENOKQ9Y6D0 94 aa9.47□□□□□ -0.89
CIT-217ENST00000545913 TRAV13-1A0A0B4J241 112 aa9.47□□□□□ -0.89
CIT-217ENST00000545913 COL8A2P25067 703 aa9.47□□□□□ -0.89
CIT-217ENST00000545913 VWC2LB2RUY7 222 aa9.47□□□□□ -0.89
CIT-217ENST00000545913 TMEM256Q8N2U0 113 aa9.47□□□□□ -0.89
CIT-217ENST00000545913 TNFRSF6BO95407 300 aa9.47□□□□□ -0.89
CIT-217ENST00000545913 KIR3DS1Q14943 382 aa9.47□□□□□ -0.89
CIT-217ENST00000545913 NEGR1Q7Z3B1 354 aa9.46□□□□□ -0.89
CIT-217ENST00000545913 C3orf56Q8N813 242 aa9.46□□□□□ -0.89
CIT-217ENST00000545913 SPXQ9BT56 116 aa9.46□□□□□ -0.89
CIT-217ENST00000545913 COL4A6Q14031 1691 aa9.46□□□□□ -0.89
CIT-217ENST00000545913 REG4Q9BYZ8 158 aa9.46□□□□□ -0.89
CIT-217ENST00000545913 SYNJ2BPP57105 145 aa9.46□□□□□ -0.89
CIT-217ENST00000545913 FAM231BA6NCW3 169 aa9.46□□□□□ -0.9
CIT-217ENST00000545913 GATA4P43694 442 aa9.46□□□□□ -0.9
CIT-217ENST00000545913 C3orf79P0CE67 100 aa9.46□□□□□ -0.9
CIT-217ENST00000545913 SSBP2P81877 361 aaPredicted RBP9.46□□□□□ -0.9
CIT-217ENST00000545913 C5orf63A6NC05 138 aa9.45□□□□□ -0.9
CIT-217ENST00000545913 ZC2HC1BQ5TFG8 222 aa9.45□□□□□ -0.9
CIT-217ENST00000545913 CHAC1Q9BUX1 264 aa9.45□□□□□ -0.9
CIT-217ENST00000545913 SMKR1H3BMG3 65 aa9.45□□□□□ -0.9
CIT-217ENST00000545913 HOXD3P31249 432 aaPredicted RBP9.45□□□□□ -0.9
CIT-217ENST00000545913 HAPLN4Q86UW8 402 aa9.45□□□□□ -0.9
CIT-217ENST00000545913 TMEM141Q96I45 108 aa9.45□□□□□ -0.9
CIT-217ENST00000545913 A6NNC1 897 aa9.45□□□□□ -0.9
CIT-217ENST00000545913 ARMS2P0C7Q2 107 aa9.45□□□□□ -0.9
CIT-217ENST00000545913 YPEL3P61236 119 aaPredicted RBP9.45□□□□□ -0.9
CIT-217ENST00000545913 TRBV25-1A0A075B6N4 114 aa9.44□□□□□ -0.9
CIT-217ENST00000545913 PFN1P07737 140 aaKnown RBP9.44□□□□□ -0.9
CIT-217ENST00000545913 DEFB130BP0DP73 79 aa9.44□□□□□ -0.9
CIT-217ENST00000545913 DEFB130AP0DP74 79 aa9.44□□□□□ -0.9
CIT-217ENST00000545913 LMO1P25800 156 aa9.44□□□□□ -0.9
CIT-217ENST00000545913 OCIAD2Q56VL3 154 aa9.44□□□□□ -0.9
CIT-217ENST00000545913 NDUFA4L2Q9NRX3 87 aa9.44□□□□□ -0.9
CIT-217ENST00000545913 OVOL3O00110 214 aa9.44□□□□□ -0.9
CIT-217ENST00000545913 MSRB2Q9Y3D2 182 aa9.44□□□□□ -0.9
CIT-217ENST00000545913 I3L3M4 83 aa9.44□□□□□ -0.9
CIT-217ENST00000545913 ZNF833PQ6ZTB9 187 aa9.44□□□□□ -0.9
CIT-217ENST00000545913 PRSS46E5RG02 174 aa9.44□□□□□ -0.9
CIT-217ENST00000545913 FAM110DQ8TAY7 271 aaPredicted RBP9.44□□□□□ -0.9
CIT-217ENST00000545913 LY6HO94772 140 aa9.44□□□□□ -0.9
CIT-217ENST00000545913 CEACAM8P31997 349 aaPredicted RBP9.44□□□□□ -0.9
CIT-217ENST00000545913 DEFB104AQ8WTQ1 72 aa9.44□□□□□ -0.9
CIT-217ENST00000545913 ZNF492Q9P255 531 aa9.44□□□□□ -0.9
CIT-217ENST00000545913 ACACBO00763 2458 aa9.43□□□□□ -0.9
CIT-217ENST00000545913 TRAV8-3A0A0A6YYJ7 113 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms