RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.46□□□□□ -0.73
HCFC2-202ENST00000544223 PHOX2AO14813 284 aa10.46□□□□□ -0.73
HCFC2-202ENST00000544223 SCGB2A1O75556 95 aa10.46□□□□□ -0.73
HCFC2-202ENST00000544223 LTAP01374 205 aa10.46□□□□□ -0.73
HCFC2-202ENST00000544223 CD99P14209 185 aa10.46□□□□□ -0.73
HCFC2-202ENST00000544223 RELQ04864 619 aaPredicted RBP10.46□□□□□ -0.73
HCFC2-202ENST00000544223 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.46□□□□□ -0.73
HCFC2-202ENST00000544223 ZC2HC1AQ96GY0 325 aa10.46□□□□□ -0.73
HCFC2-202ENST00000544223 GPR82Q96P67 336 aa10.46□□□□□ -0.73
HCFC2-202ENST00000544223 IL36BQ9NZH7 164 aa10.46□□□□□ -0.73
HCFC2-202ENST00000544223 KCNIP4Q6PIL6 250 aa10.46□□□□□ -0.74
HCFC2-202ENST00000544223 PYGO2Q9BRQ0 406 aa10.46□□□□□ -0.74
HCFC2-202ENST00000544223 MLST8Q9BVC4 326 aa10.46□□□□□ -0.74
HCFC2-202ENST00000544223 PRSS22Q9GZN4 317 aa10.46□□□□□ -0.74
HCFC2-202ENST00000544223 CHEK1O14757 476 aa10.45□□□□□ -0.74
HCFC2-202ENST00000544223 RPEL1Q2QD12 228 aa10.45□□□□□ -0.74
HCFC2-202ENST00000544223 GPR61Q9BZJ8 451 aa10.45□□□□□ -0.74
HCFC2-202ENST00000544223 AAMDCQ9H7C9 122 aa10.45□□□□□ -0.74
HCFC2-202ENST00000544223 DNAJC9-AS1A6NH13 148 aa10.45□□□□□ -0.74
HCFC2-202ENST00000544223 Q6ZQT7 251 aa10.45□□□□□ -0.74
HCFC2-202ENST00000544223 GBGT1Q8N5D6 347 aa10.45□□□□□ -0.74
HCFC2-202ENST00000544223 FMC1Q96HJ9 113 aa10.45□□□□□ -0.74
HCFC2-202ENST00000544223 ZNF331Q9NQX6 463 aaPredicted RBP10.45□□□□□ -0.74
HCFC2-202ENST00000544223 PSG8Q9UQ74 426 aa10.45□□□□□ -0.74
HCFC2-202ENST00000544223 LY96Q9Y6Y9 160 aa10.45□□□□□ -0.74
HCFC2-202ENST00000544223 PPP1R2P9O14990 202 aa10.44□□□□□ -0.74
HCFC2-202ENST00000544223 CTAG1AP78358 180 aa10.44□□□□□ -0.74
HCFC2-202ENST00000544223 USMG5Q96IX5 58 aa10.44□□□□□ -0.74
HCFC2-202ENST00000544223 NPFFR1Q9GZQ6 430 aa10.44□□□□□ -0.74
HCFC2-202ENST00000544223 TMSB15BA0A087X1C1 80 aa10.44□□□□□ -0.74
HCFC2-202ENST00000544223 TRAV8-2A0A0B4J237 113 aa10.44□□□□□ -0.74
HCFC2-202ENST00000544223 C5orf52A6NGY3 159 aa10.44□□□□□ -0.74
HCFC2-202ENST00000544223 CRIP1P50238 77 aa10.44□□□□□ -0.74
HCFC2-202ENST00000544223 FOXL1Q12952 345 aa10.44□□□□□ -0.74
HCFC2-202ENST00000544223 PSG3Q16557 428 aa10.44□□□□□ -0.74
HCFC2-202ENST00000544223 KHDC1LQ5JSQ8 128 aa10.44□□□□□ -0.74
HCFC2-202ENST00000544223 FOXC2Q99958 501 aa10.44□□□□□ -0.74
HCFC2-202ENST00000544223 SRD5A3Q9H8P0 318 aa10.44□□□□□ -0.74
HCFC2-202ENST00000544223 MUC21A0A0G2JKD1 596 aa10.43□□□□□ -0.74
HCFC2-202ENST00000544223 MUC21A0A140T8X8 626 aa10.43□□□□□ -0.74
HCFC2-202ENST00000544223 KIAA1644Q3SXP7 199 aa10.43□□□□□ -0.74
HCFC2-202ENST00000544223 MUC21Q5SSG8 566 aa10.43□□□□□ -0.74
HCFC2-202ENST00000544223 LCN12Q6JVE5 192 aa10.43□□□□□ -0.74
HCFC2-202ENST00000544223 C8orf86Q6ZUL3 223 aa10.43□□□□□ -0.74
HCFC2-202ENST00000544223 OSTCQ9NRP0 149 aa10.43□□□□□ -0.74
HCFC2-202ENST00000544223 GAR1Q9NY12 217 aaKnown RBP10.43□□□□□ -0.74
HCFC2-202ENST00000544223 PEF1Q9UBV8 284 aaKnown RBP10.43□□□□□ -0.74
HCFC2-202ENST00000544223 GATCO43716 136 aaKnown RBP10.43□□□□□ -0.74
HCFC2-202ENST00000544223 GPHB5Q86YW7 130 aa10.43□□□□□ -0.74
HCFC2-202ENST00000544223 C20orf173Q96LM9 149 aa10.43□□□□□ -0.74
HCFC2-202ENST00000544223 BIN3Q9NQY0 253 aa10.43□□□□□ -0.74
HCFC2-202ENST00000544223 AGRNO00468 2067 aa10.43□□□□□ -0.74
HCFC2-202ENST00000544223 J3KRW8 73 aa10.42□□□□□ -0.74
HCFC2-202ENST00000544223 RAB4BP61018 213 aa10.42□□□□□ -0.74
HCFC2-202ENST00000544223 WFDC3Q8IUB2 231 aa10.42□□□□□ -0.74
HCFC2-202ENST00000544223 TMEM75Q8N9X5 138 aa10.42□□□□□ -0.74
HCFC2-202ENST00000544223 NEU1Q99519 415 aa10.42□□□□□ -0.74
HCFC2-202ENST00000544223 TRAPPC1Q9Y5R8 145 aa10.42□□□□□ -0.74
HCFC2-202ENST00000544223 IGHV4OR15-8A0A075B7B6 117 aa10.42□□□□□ -0.74
HCFC2-202ENST00000544223 A0A087WW49 117 aa10.42□□□□□ -0.74
HCFC2-202ENST00000544223 A0A0G2JLM5 398 aa10.42□□□□□ -0.74
HCFC2-202ENST00000544223 GRIFINA4D1Z8 144 aa10.42□□□□□ -0.74
HCFC2-202ENST00000544223 PCP4L1A6NKN8 68 aa10.42□□□□□ -0.74
HCFC2-202ENST00000544223 IFITM10A6NMD0 228 aa10.42□□□□□ -0.74
HCFC2-202ENST00000544223 TFPI2P48307 235 aa10.42□□□□□ -0.74
HCFC2-202ENST00000544223 SYNJ2BPP57105 145 aa10.42□□□□□ -0.74
HCFC2-202ENST00000544223 TCTEX1D4Q5JR98 221 aa10.42□□□□□ -0.74
HCFC2-202ENST00000544223 U3KQE9 123 aa10.42□□□□□ -0.74
HCFC2-202ENST00000544223 TRRAPQ9Y4A5 3859 aa10.41□□□□□ -0.74
HCFC2-202ENST00000544223 HIGD1CA8MV81 97 aa10.41□□□□□ -0.74
HCFC2-202ENST00000544223 F6UB75 175 aa10.41□□□□□ -0.74
HCFC2-202ENST00000544223 NDUFA4O00483 81 aa10.41□□□□□ -0.74
HCFC2-202ENST00000544223 ZNF80P51504 273 aaPredicted RBP10.41□□□□□ -0.74
HCFC2-202ENST00000544223 PDE6HQ13956 83 aa10.41□□□□□ -0.74
HCFC2-202ENST00000544223 TMEM183AQ8IXX5 376 aa10.41□□□□□ -0.74
HCFC2-202ENST00000544223 GTSF1Q8WW33 167 aa10.41□□□□□ -0.74
HCFC2-202ENST00000544223 WFDC12Q8WWY7 111 aa10.41□□□□□ -0.74
HCFC2-202ENST00000544223 SSBP4Q9BWG4 385 aaPredicted RBP10.41□□□□□ -0.74
HCFC2-202ENST00000544223 RHPN1-AS1Q9BWJ2 59 aa10.41□□□□□ -0.74
HCFC2-202ENST00000544223 H3BUA1 57 aa10.41□□□□□ -0.74
HCFC2-202ENST00000544223 PSG9Q00887 426 aa10.41□□□□□ -0.74
HCFC2-202ENST00000544223 KLHDC1Q8N7A1 406 aa10.41□□□□□ -0.74
HCFC2-202ENST00000544223 NUP35Q8NFH5 326 aa10.41□□□□□ -0.74
HCFC2-202ENST00000544223 GLMPQ8WWB7 406 aa10.41□□□□□ -0.74
HCFC2-202ENST00000544223 TMEM190Q8WZ59 177 aa10.41□□□□□ -0.74
HCFC2-202ENST00000544223 TPPP3Q9BW30 176 aa10.41□□□□□ -0.74
HCFC2-202ENST00000544223 PRDM13Q9H4Q3 707 aa10.41□□□□□ -0.74
HCFC2-202ENST00000544223 A0A1W2PRX2 142 aa10.4□□□□□ -0.74
HCFC2-202ENST00000544223 P01737 135 aa10.4□□□□□ -0.74
HCFC2-202ENST00000544223 CSN1S1P47710 185 aa10.4□□□□□ -0.74
HCFC2-202ENST00000544223 CAMPP49913 170 aa10.4□□□□□ -0.74
HCFC2-202ENST00000544223 ACTL10Q5JWF8 245 aa10.4□□□□□ -0.74
HCFC2-202ENST00000544223 C16orf54Q6UWD8 224 aa10.4□□□□□ -0.74
HCFC2-202ENST00000544223 Q6ZSV7 163 aa10.4□□□□□ -0.74
HCFC2-202ENST00000544223 S100A7AQ86SG5 101 aa10.4□□□□□ -0.74
HCFC2-202ENST00000544223 LYPD1Q8N2G4 141 aa10.4□□□□□ -0.74
HCFC2-202ENST00000544223 PGLYRP4Q96LB8 373 aa10.4□□□□□ -0.74
HCFC2-202ENST00000544223 C16orf92Q96LL3 132 aa10.4□□□□□ -0.74
HCFC2-202ENST00000544223 SMIM27A0A1W2PRY6 76 aa10.4□□□□□ -0.75
HCFC2-202ENST00000544223 SNURFLB1AK76 121 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms