RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 RTL8BQ17RB0 113 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 C1orf134Q5TEV5 83 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 SAMD13Q5VXD3 122 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 C22orf39Q6P5X5 142 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 UNQ6190/PRO20217Q6UXQ8 127 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 CROCCP2Q86T23 111 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 OR4D11Q8NGI4 311 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 TEX47Q8TBZ9 253 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 ANP32BQ92688 251 aaKnown RBP0.67□□□□□ -2.3
CCDC170-203ENST00000544131 POP5Q969H6 163 aaKnown RBP0.67□□□□□ -2.3
CCDC170-203ENST00000544131 CHCHD1Q96BP2 118 aaKnown RBP0.67□□□□□ -2.3
CCDC170-203ENST00000544131 PLEKHB2Q96CS7 222 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 MALSU1Q96EH3 234 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 RTL8AQ9BWD3 113 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 POPDC3Q9HBV1 291 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 TAS2R4Q9NYW5 299 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 MYOM1P52179 1685 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 ROBO1Q9Y6N7 1651 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 MAP1BP46821 2468 aaKnown RBP0.67□□□□□ -2.3
CCDC170-203ENST00000544131 FAM135AQ9P2D6 1515 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 ROCK1Q13464 1354 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 ADCY10Q96PN6 1610 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 CCDC180Q9P1Z9 1646 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 HECTD1Q9ULT8 2610 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 TTC28Q96AY4 2481 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 ITPR3Q14573 2671 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 ANKRD11Q6UB99 2663 aaPredicted RBP0.66□□□□□ -2.3
CCDC170-203ENST00000544131 CEP250Q9BV73 2442 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 SHPRHQ149N8 1683 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 DISP2A7MBM2 1401 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 ABCC5O15440 1437 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 C10orf71Q711Q0 1435 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 EFCAB6Q5THR3 1501 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 KDM5DQ9BY66 1539 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 TRGV10A0A0A0MS01 117 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 TRBV6-8A0A0A6YYG3 113 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 TRDV1A0A1B0GX56 115 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 TLCD2A6NGC4 264 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 CCDC160A6NGH7 325 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 M0QZK8 103 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 RER1O15258 196 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 MRPS14O60783 128 aaKnown RBP0.66□□□□□ -2.3
CCDC170-203ENST00000544131 UBL3O95164 117 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 IFNA14P01570 189 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 IGLV1-51P01701 117 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 MT-ND6P03923 174 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 COX6A1P12074 109 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 HLA-EP13747 358 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 RPS3P23396 243 aaKnown RBP eCLIP0.66□□□□□ -2.3
CCDC170-203ENST00000544131 SCGB2B2Q4G0G5 96 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 TMEM128Q5BJH2 165 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 C1orf140Q5VVS0 124 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 PATE2Q6UY27 113 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 CANT1Q8WVQ1 401 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 TEX37Q96LM6 180 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 CCDC115Q96NT0 180 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 CCDC32Q9BV29 185 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 PBOV1Q9GZY1 135 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 CENPHQ9H3R5 247 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 CACYBPQ9HB71 228 aaKnown RBP0.66□□□□□ -2.3
CCDC170-203ENST00000544131 TAS2R7Q9NYW3 318 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 NAT8BQ9UHF3 227 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 CEP290O15078 2479 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 SPTAN1Q13813 2472 aaKnown RBP0.66□□□□□ -2.3
CCDC170-203ENST00000544131 TARBP1Q13395 1621 aaKnown RBP0.66□□□□□ -2.3
CCDC170-203ENST00000544131 ASCC3Q8N3C0 2202 aaKnown RBP0.66□□□□□ -2.3
CCDC170-203ENST00000544131 SPHKAPQ2M3C7 1700 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 NCAPD3P42695 1498 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 UBR4Q5T4S7 5183 aa0.66□□□□□ -2.3
CCDC170-203ENST00000544131 WIZO95785 1651 aa0.65□□□□□ -2.3
CCDC170-203ENST00000544131 KIDINS220Q9ULH0 1771 aa0.65□□□□□ -2.3
CCDC170-203ENST00000544131 JMJD1CQ15652 2540 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 SCRIBQ14160 1630 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 MAP3K4Q9Y6R4 1608 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 ANKRD17O75179 2603 aaKnown RBP0.65□□□□□ -2.31
CCDC170-203ENST00000544131 MED12Q93074 2177 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 ABCA3Q99758 1704 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 C7orf71A4D174 169 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 TSTD3H0UI37 97 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 M0R233 179 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 ARPC5O15511 151 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 OR1I1O60431 355 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 GGCTO75223 188 aaKnown RBP0.65□□□□□ -2.31
CCDC170-203ENST00000544131 CST7O76096 145 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 BRS3P32247 399 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 ROMO1P60602 79 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 CNBPP62633 177 aaKnown RBP0.65□□□□□ -2.31
CCDC170-203ENST00000544131 HBBP68871 147 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 TFAMQ00059 246 aaKnown RBP0.65□□□□□ -2.31
CCDC170-203ENST00000544131 KLRD1Q13241 179 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 SPRNQ5BIV9 151 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 SPANXN5Q5MJ07 72 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 TEX261Q6UWH6 196 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 TMEM14EPQ6UXP3 125 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 C4orf22Q6V702 233 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 DEFB128Q7Z7B8 93 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 PHF13Q86YI8 300 aaPredicted RBP0.65□□□□□ -2.31
CCDC170-203ENST00000544131 Q8N2B8 174 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 Q8N814 137 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 TMEM35BQ8NCS4 154 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms