RNA–Protein interactions for RNA: ENST00000544125.1

MDM2-231, Transcript of MDM2 proto-oncogene, human

TSL 2

Gene MDM2, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MDM2-231	ENST00000544125	SMIM20	Q8N5G0	67 aa		0.52	□□□□□ -2.33
MDM2-231	ENST00000544125	SKA2	Q8WVK7	121 aa	Predicted RBP	0.52	□□□□□ -2.33
MDM2-231	ENST00000544125	PLEKHB2	Q96CS7	222 aa		0.52	□□□□□ -2.33
MDM2-231	ENST00000544125	ZC2HC1A	Q96GY0	325 aa		0.52	□□□□□ -2.33
MDM2-231	ENST00000544125	HOPX	Q9BPY8	73 aa	Predicted RBP	0.52	□□□□□ -2.33
MDM2-231	ENST00000544125	RTL8A	Q9BWD3	113 aa		0.52	□□□□□ -2.33
MDM2-231	ENST00000544125	MAP1LC3B	Q9GZQ8	125 aa		0.52	□□□□□ -2.33
MDM2-231	ENST00000544125	MED11	Q9P086	117 aa		0.52	□□□□□ -2.33
MDM2-231	ENST00000544125	LAMTOR2	Q9Y2Q5	125 aa		0.52	□□□□□ -2.33
MDM2-231	ENST00000544125	YTHDC2	Q9H6S0	1430 aa	Known RBP	0.52	□□□□□ -2.33
MDM2-231	ENST00000544125	CAMSAP2	Q08AD1	1489 aa		0.52	□□□□□ -2.33
MDM2-231	ENST00000544125	GNG14	A0A1W2PPG7	69 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	NUPR2	A6NF83	97 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	TSTD3	H0UI37	97 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	JMJD7-PLA2G4B	H0Y9G9	81 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125		H0YJX3	145 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	GPR31	O00270	319 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	MFSD11	O43934	449 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	TRGC2	P03986	189 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	IFNA4	P05014	189 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	NDUFA6	P56556	154 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	EIF3I	Q13347	325 aa	Known RBP	0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	RTL8B	Q17RB0	113 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	C1orf140	Q5VVS0	124 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	TOMM20L	Q6UXN7	152 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	CD109	Q6YHK3	1445 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	ARPIN	Q7Z6K5	226 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	AKAP14	Q86UN6	197 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	TAC4	Q86UU9	113 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	OR9Q1	Q8NGQ5	310 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	PYDC1	Q8WXC3	89 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	HYLS1	Q96M11	299 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	GPX7	Q96SL4	187 aa	Predicted RBP	0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	TCEAL2	Q9H3H9	227 aa	Predicted RBP	0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	CACYBP	Q9HB71	228 aa	Known RBP	0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	MRPL40	Q9NQ50	206 aa	Known RBP	0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	BATF3	Q9NR55	127 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	SMPX	Q9UHP9	88 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	HSPB11	Q9Y547	144 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	NUBP2	Q9Y5Y2	271 aa		0.51	□□□□□ -2.33
MDM2-231	ENST00000544125	FREM3	P0C091	2139 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	NUP210	Q8TEM1	1887 aa	Predicted RBP	0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	RFX7	Q2KHR2	1363 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125		A0A1W2PRE2	83 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	hDV103S1	A0JD37	113 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	C9orf170	A2RU37	121 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	ARL5C	A6NH57	179 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	RER1	O15258	196 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	LYRM1	O43325	122 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	CST7	O76096	145 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	BCL2	P10415	239 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	S100G	P29377	79 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	GLRX	P35754	106 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	RPS28	P62857	69 aa	Known RBP	0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	MRPS36	P82909	103 aa	Known RBP	0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	MSMO1	Q15800	293 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	KRTAP21-1	Q3LI58	79 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	TMEM128	Q5BJH2	165 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	TMEM78	Q5T7P6	136 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	PHF5A	Q7RTV0	110 aa	Known RBP	0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	ANGPTL5	Q86XS5	388 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	TMEM35B	Q8NCS4	154 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	OR10AG1	Q8NH19	301 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	MCEE	Q96PE7	176 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	LXN	Q9BS40	222 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	EFCAB11	Q9BUY7	163 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	C19orf12	Q9NSK7	152 aa		0.5	□□□□□ -2.33
MDM2-231	ENST00000544125	FRMPD1	Q5SYB0	1578 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	ERBIN	Q96RT1	1412 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	TRAV27	A0A087WT01	109 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	C5orf67	F2Z3F1	127 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	KPNA4	O00629	521 aa	Predicted RBP	0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	HIST1H2BK	O60814	126 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	HIST1H2BJ	P06899	126 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	NBEAP1	P0C6P0	100 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	RPL35	P42766	123 aa	Known RBP	0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	SRP9	P49458	86 aa	Known RBP	0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	GTF2A1	P52655	376 aa	Predicted RBP	0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	LSM3	P62310	102 aa	Known RBP	0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	HBB	P68871	147 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	LTC4S	Q16873	150 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	SPATA45	Q537H7	98 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	FKBP1C	Q5VVH2	108 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	SAMD13	Q5VXD3	122 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	GRPEL2	Q8TAA5	225 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	THEM6	Q8WUY1	208 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	AIF1L	Q9BQI0	150 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	OR2H1	Q9GZK4	316 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	NAT8B	Q9UHF3	227 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	HSPB8	Q9UJY1	196 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	GINS2	Q9Y248	185 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	NDUFAF1	Q9Y375	327 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	ANK1	P16157	1881 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	SPTB	P11277	2137 aa		0.49	□□□□□ -2.33
MDM2-231	ENST00000544125	LOC285556	D6RIA3	1793 aa		0.48	□□□□□ -2.33
MDM2-231	ENST00000544125		A0A096LPI6	279 aa		0.48	□□□□□ -2.33
MDM2-231	ENST00000544125	BORCS7-ASMT	A0A0B4J1R7	106 aa		0.48	□□□□□ -2.33
MDM2-231	ENST00000544125	TRDV1	A0A1B0GX56	115 aa		0.48	□□□□□ -2.33
MDM2-231	ENST00000544125		H3BMG7	143 aa		0.48	□□□□□ -2.33
MDM2-231	ENST00000544125	CSN2	P05814	226 aa		0.48	□□□□□ -2.33

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms