RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 RAB5BP61020 215 aa15.12■□□□□ 0.01
COPS7A-218ENST00000543939 RPEL1Q2QD12 228 aa15.12■□□□□ 0.01
COPS7A-218ENST00000543939 C8orf86Q6ZUL3 223 aa15.12■□□□□ 0.01
COPS7A-218ENST00000543939 TRAV8-2A0A0B4J237 113 aa15.11■□□□□ 0.01
COPS7A-218ENST00000543939 LCN12Q6JVE5 192 aa15.11■□□□□ 0.01
COPS7A-218ENST00000543939 PRR27Q6MZM9 219 aa15.11■□□□□ 0.01
COPS7A-218ENST00000543939 ZFP82Q8N141 532 aa15.11■□□□□ 0.01
COPS7A-218ENST00000543939 NUDT10Q8NFP7 164 aa15.11■□□□□ 0.01
COPS7A-218ENST00000543939 NUDT11Q96G61 164 aa15.11■□□□□ 0.01
COPS7A-218ENST00000543939 BIN3Q9NQY0 253 aa15.11■□□□□ 0.01
COPS7A-218ENST00000543939 SMPXQ9UHP9 88 aa15.11■□□□□ 0.01
COPS7A-218ENST00000543939 ZFP30Q9Y2G7 519 aa15.11■□□□□ 0.01
COPS7A-218ENST00000543939 TYMSP04818 313 aa15.1■□□□□ 0.01
COPS7A-218ENST00000543939 Q71RC1 249 aaPredicted RBP15.1■□□□□ 0.01
COPS7A-218ENST00000543939 RHPN1-AS1Q9BWJ2 59 aa15.1■□□□□ 0.01
COPS7A-218ENST00000543939 SRD5A3Q9H8P0 318 aa15.1■□□□□ 0.01
COPS7A-218ENST00000543939 ZNF492Q9P255 531 aa15.1■□□□□ 0.01
COPS7A-218ENST00000543939 UFC1Q9Y3C8 167 aa15.1■□□□□ 0.01
COPS7A-218ENST00000543939 IGHV4OR15-8A0A075B7B6 117 aa15.09■□□□□ 0.01
COPS7A-218ENST00000543939 A0A087WW49 117 aa15.09■□□□□ 0.01
COPS7A-218ENST00000543939 IGKV2-40A0A087WW87 121 aaPredicted RBP15.09■□□□□ 0.01
COPS7A-218ENST00000543939 ZNF705GA8MUZ8 300 aaPredicted RBP15.09■□□□□ 0.01
COPS7A-218ENST00000543939 ZNF705FA8MVS1 300 aaPredicted RBP15.09■□□□□ 0.01
COPS7A-218ENST00000543939 IGKV2D-40P01614 121 aaPredicted RBP15.09■□□□□ 0.01
COPS7A-218ENST00000543939 TCTEX1D4Q5JR98 221 aa15.09■□□□□ 0.01
COPS7A-218ENST00000543939 LINC00322Q6ZN03 302 aaPredicted RBP15.09■□□□□ 0.01
COPS7A-218ENST00000543939 ZNF418Q8TF45 676 aaPredicted RBP15.09■□□□□ 0.01
COPS7A-218ENST00000543939 BTF3L4Q96K17 158 aa15.09■□□□□ 0.01
COPS7A-218ENST00000543939 TRAV9-1A0A075B6T8 112 aa15.09■□□□□ 0.01
COPS7A-218ENST00000543939 C19orf71A6NCJ1 209 aa15.09■□□□□ 0.01
COPS7A-218ENST00000543939 GATCO43716 136 aaKnown RBP15.09■□□□□ 0.01
COPS7A-218ENST00000543939 CDX1P47902 265 aaPredicted RBP15.09■□□□□ 0.01
COPS7A-218ENST00000543939 HILS1P60008 231 aa15.09■□□□□ 0.01
COPS7A-218ENST00000543939 REC114Q7Z4M0 266 aa15.09■□□□□ 0.01
COPS7A-218ENST00000543939 RNF182Q8N6D2 247 aa15.09■□□□□ 0.01
COPS7A-218ENST00000543939 WIPF2Q8TF74 440 aaPredicted RBP15.09■□□□□ 0.01
COPS7A-218ENST00000543939 MRPL53Q96EL3 112 aaKnown RBP15.09■□□□□ 0.01
COPS7A-218ENST00000543939 FBLL1A6NHQ2 334 aaKnown RBP15.08■□□□□ 0
COPS7A-218ENST00000543939 NOTCH2Q04721 2471 aa15.08■□□□□ 0
COPS7A-218ENST00000543939 SMIM27A0A1W2PRY6 76 aa15.07■□□□□ 0
COPS7A-218ENST00000543939 TMEM213A2RRL7 107 aa15.07■□□□□ 0
COPS7A-218ENST00000543939 LGALS9O00182 355 aa15.07■□□□□ 0
COPS7A-218ENST00000543939 EDN2P20800 178 aa15.07■□□□□ 0
COPS7A-218ENST00000543939 C18orf65Q6ZTR6 163 aa15.07■□□□□ 0
COPS7A-218ENST00000543939 CLEC5AQ9NY25 188 aa15.07■□□□□ 0
COPS7A-218ENST00000543939 A8MWP6 167 aa15.06■□□□□ 0
COPS7A-218ENST00000543939 PRAC2D3DTV9 90 aa15.06■□□□□ 0
COPS7A-218ENST00000543939 TRGC2P03986 189 aa15.06■□□□□ 0
COPS7A-218ENST00000543939 HOXD3P31249 432 aaPredicted RBP15.06■□□□□ 0
COPS7A-218ENST00000543939 ASCL2Q99929 193 aa15.06■□□□□ 0
COPS7A-218ENST00000543939 VGLL1Q99990 258 aa15.06■□□□□ 0
COPS7A-218ENST00000543939 C16orf95Q9H693 158 aa15.06■□□□□ 0
COPS7A-218ENST00000543939 OTOGQ6ZRI0 2925 aa15.06■□□□□ 0
COPS7A-218ENST00000543939 RBAKDNA6NC62 111 aa15.06■□□□□ 0
COPS7A-218ENST00000543939 SOCS3O14543 225 aa15.06■□□□□ 0
COPS7A-218ENST00000543939 PHOX2AO14813 284 aa15.06■□□□□ 0
COPS7A-218ENST00000543939 C4orf3Q8WVX3 66 aa15.06■□□□□ 0
COPS7A-218ENST00000543939 ZC2HC1AQ96GY0 325 aa15.06■□□□□ 0
COPS7A-218ENST00000543939 C16orf92Q96LL3 132 aa15.06■□□□□ 0
COPS7A-218ENST00000543939 HIVEP2P31629 2446 aa15.05■□□□□ 0
COPS7A-218ENST00000543939 CA1P00915 261 aaPredicted RBP15.05■□□□□ -0
COPS7A-218ENST00000543939 GBGT1Q8N5D6 347 aa15.05■□□□□ -0
COPS7A-218ENST00000543939 SYNJ2BPP57105 145 aa15.04■□□□□ -0
COPS7A-218ENST00000543939 COX8CQ7Z4L0 72 aa15.04■□□□□ -0
COPS7A-218ENST00000543939 C8orf49Q96NF6 230 aa15.04■□□□□ -0
COPS7A-218ENST00000543939 RPP21Q9H633 154 aaKnown RBP15.04■□□□□ -0
COPS7A-218ENST00000543939 NRN1Q9NPD7 142 aa15.04■□□□□ -0
COPS7A-218ENST00000543939 MTORP42345 2549 aa15.04■□□□□ -0
COPS7A-218ENST00000543939 NPIPB6E9PJ23 425 aa15.03■□□□□ -0
COPS7A-218ENST00000543939 P01737 135 aa15.03■□□□□ -0
COPS7A-218ENST00000543939 BMI1P35226 326 aa15.03■□□□□ -0
COPS7A-218ENST00000543939 SAPCD1Q5SSQ6 148 aa15.03■□□□□ -0
COPS7A-218ENST00000543939 DAZAP1Q96EP5 407 aaKnown RBP15.03■□□□□ -0
COPS7A-218ENST00000543939 PRR25Q96S07 402 aa15.03■□□□□ -0
COPS7A-218ENST00000543939 TCL1AP56279 114 aa15.03■□□□□ -0
COPS7A-218ENST00000543939 KLF5Q13887 457 aaPredicted RBP15.03■□□□□ -0
COPS7A-218ENST00000543939 CT83Q5H943 113 aa15.03■□□□□ -0
COPS7A-218ENST00000543939 WFDC12Q8WWY7 111 aa15.03■□□□□ -0
COPS7A-218ENST00000543939 C20orf173Q96LM9 149 aa15.03■□□□□ -0
COPS7A-218ENST00000543939 FOSL1P15407 271 aa15.02□□□□□ -0.01
COPS7A-218ENST00000543939 CRIP1P50238 77 aa15.02□□□□□ -0.01
COPS7A-218ENST00000543939 RPL11P62913 178 aaKnown RBP15.02□□□□□ -0.01
COPS7A-218ENST00000543939 ERCC8Q13216 396 aa15.02□□□□□ -0.01
COPS7A-218ENST00000543939 DEFB136Q30KP8 78 aa15.02□□□□□ -0.01
COPS7A-218ENST00000543939 TCF24Q7RTU0 167 aa15.02□□□□□ -0.01
COPS7A-218ENST00000543939 LINC01006Q8NI28 216 aa15.02□□□□□ -0.01
COPS7A-218ENST00000543939 Q8TAT8 98 aa15.02□□□□□ -0.01
COPS7A-218ENST00000543939 TSKUQ8WUA8 353 aa15.02□□□□□ -0.01
COPS7A-218ENST00000543939 LINC01619G3V211 115 aa15.01□□□□□ -0.01
COPS7A-218ENST00000543939 KHDC1LQ5JSQ8 128 aa15.01□□□□□ -0.01
COPS7A-218ENST00000543939 OR4B1Q8NGF8 309 aa15.01□□□□□ -0.01
COPS7A-218ENST00000543939 FRZBQ92765 325 aa15.01□□□□□ -0.01
COPS7A-218ENST00000543939 JMJD8Q96S16 334 aa15.01□□□□□ -0.01
COPS7A-218ENST00000543939 IZUMO1RA6ND01 250 aa15□□□□□ -0.01
COPS7A-218ENST00000543939 SLURP1P55000 103 aa15□□□□□ -0.01
COPS7A-218ENST00000543939 ACTL10Q5JWF8 245 aa15□□□□□ -0.01
COPS7A-218ENST00000543939 CT45A10P0DMU9 189 aa15□□□□□ -0.01
COPS7A-218ENST00000543939 KLHL30-AS1Q8NEE0 82 aa15□□□□□ -0.01
COPS7A-218ENST00000543939 OR11H1Q8NG94 326 aa15□□□□□ -0.01
COPS7A-218ENST00000543939 OR1N2Q8NGR9 330 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms