RNA–Protein interactions for RNA: ENST00000543470.5

RPS6KC1-207, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 2 BASIC

Gene RPS6KC1, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-207ENST00000543470 PPBPP02775 128 aa11.67□□□□□ -0.54
RPS6KC1-207ENST00000543470 SPRNQ5BIV9 151 aa11.67□□□□□ -0.54
RPS6KC1-207ENST00000543470 GAFA1Q96PS6 74 aa11.67□□□□□ -0.54
RPS6KC1-207ENST00000543470 C18orf32Q8TCD1 76 aa11.67□□□□□ -0.54
RPS6KC1-207ENST00000543470 SIGLEC9Q9Y336 463 aa11.67□□□□□ -0.54
RPS6KC1-207ENST00000543470 AMN1Q8IY45 258 aa11.67□□□□□ -0.54
RPS6KC1-207ENST00000543470 SLC50A1Q9BRV3 221 aa11.67□□□□□ -0.54
RPS6KC1-207ENST00000543470 NDPQ00604 133 aa11.66□□□□□ -0.54
RPS6KC1-207ENST00000543470 Q5PR19 223 aa11.66□□□□□ -0.54
RPS6KC1-207ENST00000543470 CCL19Q99731 98 aa11.66□□□□□ -0.54
RPS6KC1-207ENST00000543470 USP9XQ93008 2570 aaPredicted RBP11.66□□□□□ -0.54
RPS6KC1-207ENST00000543470 IGHV3-64A0A075B6Q5 118 aa11.66□□□□□ -0.54
RPS6KC1-207ENST00000543470 MMP23AO75900 390 aa11.66□□□□□ -0.54
RPS6KC1-207ENST00000543470 DUX3Q96PT4 197 aa11.66□□□□□ -0.54
RPS6KC1-207ENST00000543470 C11orf44Q8N8P7 122 aa11.66□□□□□ -0.54
RPS6KC1-207ENST00000543470 USP9YO00507 2555 aaPredicted RBP11.66□□□□□ -0.54
RPS6KC1-207ENST00000543470 A0A1W2PPI3 338 aa11.65□□□□□ -0.54
RPS6KC1-207ENST00000543470 SYS1-DBNDD2H3BUS1 97 aa11.65□□□□□ -0.54
RPS6KC1-207ENST00000543470 NPFFO15130 113 aa11.65□□□□□ -0.54
RPS6KC1-207ENST00000543470 SRSF1Q07955 248 aaKnown RBP eCLIP11.65□□□□□ -0.543e-10■■■■□ 23.6
RPS6KC1-207ENST00000543470 BCL6BQ8N143 479 aaPredicted RBP11.65□□□□□ -0.54
RPS6KC1-207ENST00000543470 OR4X2Q8NGF9 303 aa11.65□□□□□ -0.54
RPS6KC1-207ENST00000543470 ZNF479Q96JC4 524 aa11.65□□□□□ -0.54
RPS6KC1-207ENST00000543470 TRGV9Q99603 122 aa11.65□□□□□ -0.54
RPS6KC1-207ENST00000543470 VCX2Q9H322 139 aa11.65□□□□□ -0.54
RPS6KC1-207ENST00000543470 KIAA1549Q9HCM3 1950 aa11.65□□□□□ -0.55
RPS6KC1-207ENST00000543470 TRAV40A0A0B4J280 105 aa11.65□□□□□ -0.55
RPS6KC1-207ENST00000543470 ZNF815PA8K554 130 aa11.65□□□□□ -0.55
RPS6KC1-207ENST00000543470 DNAL4O96015 105 aa11.65□□□□□ -0.55
RPS6KC1-207ENST00000543470 LY6DQ14210 128 aa11.65□□□□□ -0.55
RPS6KC1-207ENST00000543470 MORN5Q5VZ52 161 aa11.65□□□□□ -0.55
RPS6KC1-207ENST00000543470 TANC2Q9HCD6 1990 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 SRRM4A7MD48 611 aaKnown RBP11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 TMEM262E9PQX1 116 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 H7C1H1 209 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 ARMS2P0C7Q2 107 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 SMAGPQ0VAQ4 97 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 DSCAML1Q8TD84 2053 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 C11orf52Q96A22 123 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 TMEM14BQ9NUH8 114 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 CYSLTR1Q9Y271 337 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 LY96Q9Y6Y9 160 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 TRAV21A0A0B4J279 112 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 IGKCP01834 107 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 THBDP07204 575 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 PRR20EP86478 221 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 PRR20CP86479 221 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 PRR20DP86480 221 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 PRR20BP86481 221 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 PRR20AP86496 221 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 TNFRSF14Q92956 283 aa11.64□□□□□ -0.55
RPS6KC1-207ENST00000543470 PAX8Q06710 450 aa11.63□□□□□ -0.55
RPS6KC1-207ENST00000543470 ZC2HC1BQ5TFG8 222 aa11.63□□□□□ -0.55
RPS6KC1-207ENST00000543470 SPACA3Q8IXA5 215 aa11.63□□□□□ -0.55
RPS6KC1-207ENST00000543470 Q8N7P7 452 aa11.63□□□□□ -0.55
RPS6KC1-207ENST00000543470 MOB4Q9Y3A3 225 aa11.63□□□□□ -0.55
RPS6KC1-207ENST00000543470 JMJD1CQ15652 2540 aa11.63□□□□□ -0.55
RPS6KC1-207ENST00000543470 A0A0G2JNJ9 132 aa11.63□□□□□ -0.55
RPS6KC1-207ENST00000543470 LINC00310P59036 64 aa11.63□□□□□ -0.55
RPS6KC1-207ENST00000543470 SSBP2P81877 361 aaPredicted RBP11.63□□□□□ -0.55
RPS6KC1-207ENST00000543470 LINC01587Q99440 93 aa11.63□□□□□ -0.55
RPS6KC1-207ENST00000543470 Q9UFV3 132 aa11.63□□□□□ -0.55
RPS6KC1-207ENST00000543470 ZFYVE26Q68DK2 2539 aa11.63□□□□□ -0.55
RPS6KC1-207ENST00000543470 IGKV1OR2-108A0A075B7D4 117 aa11.63□□□□□ -0.55
RPS6KC1-207ENST00000543470 IGLL1P15814 213 aa11.63□□□□□ -0.55
RPS6KC1-207ENST00000543470 SEC11AP67812 179 aa11.63□□□□□ -0.55
RPS6KC1-207ENST00000543470 C5orf64Q2M2E5 130 aa11.63□□□□□ -0.55
RPS6KC1-207ENST00000543470 A0A1W2PRX2 142 aa11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 SAMD5Q5TGI4 173 aa11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 BRD3OSQ6XYD6 125 aa11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 SMAD7O15105 426 aaKnown RBP11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 C1orf229Q6ZS94 237 aaPredicted RBP11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 TRAV2A0A0B4J234 112 aa11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 TRAV12-3A0A0B4J271 114 aa11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 IFI27P40305 119 aaPredicted RBP11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 HSD52Q0P140 79 aa11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 TMEM249Q2WGJ8 235 aa11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 PSMG4Q5JS54 123 aa11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 TP73-AS1Q9UF72 201 aa11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 TRAV8-2A0A0B4J237 113 aa11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 A0A1B0GV72 72 aa11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 MBD3L4A6NDZ8 208 aaPredicted RBP11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 MBD3L3A6NE82 208 aaPredicted RBP11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 MBD3L5A6NJ08 208 aaPredicted RBP11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 TDGF1P13385 188 aa11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 C17orf58Q2M2W7 97 aa11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 VMO1Q7Z5L0 202 aa11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 MBD3L2Q8NHZ7 208 aaPredicted RBP11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 MS4A6AQ9H2W1 248 aa11.62□□□□□ -0.55
RPS6KC1-207ENST00000543470 ZNF688P0C7X2 276 aa11.61□□□□□ -0.55
RPS6KC1-207ENST00000543470 IGHG3P01860 377 aa11.61□□□□□ -0.55
RPS6KC1-207ENST00000543470 GAGE1Q13065 139 aa11.61□□□□□ -0.55
RPS6KC1-207ENST00000543470 EIF4EBP1Q13541 118 aaPredicted RBP11.61□□□□□ -0.55
RPS6KC1-207ENST00000543470 A0A1W2PNU3 283 aaPredicted RBP11.61□□□□□ -0.55
RPS6KC1-207ENST00000543470 BUB1B-PAK6H3BSN5 160 aa11.61□□□□□ -0.55
RPS6KC1-207ENST00000543470 SH2D1AO60880 128 aa11.61□□□□□ -0.55
RPS6KC1-207ENST00000543470 PAX1P15863 534 aa11.61□□□□□ -0.55
RPS6KC1-207ENST00000543470 MRPL27Q9P0M9 148 aaKnown RBP11.61□□□□□ -0.55
RPS6KC1-207ENST00000543470 CNTFRP26992 372 aa11.6□□□□□ -0.55
RPS6KC1-207ENST00000543470 ZNF329Q86UD4 541 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms