RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 SAT2Q96F10 170 aaPredicted RBP13.67□□□□□ -0.22
CACNA1C-230ENST00000543114 LSM5Q9Y4Y9 91 aaKnown RBP13.67□□□□□ -0.22
CACNA1C-230ENST00000543114 PXMP4Q9Y6I8 212 aa13.67□□□□□ -0.22
CACNA1C-230ENST00000543114 J3KRW8 73 aa13.66□□□□□ -0.22
CACNA1C-230ENST00000543114 L7N2F9 121 aa13.66□□□□□ -0.22
CACNA1C-230ENST00000543114 PLA2G10O15496 165 aa13.66□□□□□ -0.22
CACNA1C-230ENST00000543114 CST7O76096 145 aa13.66□□□□□ -0.22
CACNA1C-230ENST00000543114 VAMP2P63027 116 aa13.66□□□□□ -0.22
CACNA1C-230ENST00000543114 NRARPQ7Z6K4 114 aa13.66□□□□□ -0.22
CACNA1C-230ENST00000543114 C11orf1Q9H5F2 150 aa13.66□□□□□ -0.22
CACNA1C-230ENST00000543114 TRAV26-1A0A087WT03 109 aa13.65□□□□□ -0.22
CACNA1C-230ENST00000543114 TRAV5A0A0B4J249 113 aa13.65□□□□□ -0.22
CACNA1C-230ENST00000543114 FAM25EA8MYX2 175 aa13.65□□□□□ -0.22
CACNA1C-230ENST00000543114 C16orf90A8MZG2 172 aa13.65□□□□□ -0.22
CACNA1C-230ENST00000543114 HOXA5P20719 270 aa13.65□□□□□ -0.22
CACNA1C-230ENST00000543114 CAV2P51636 162 aa13.65□□□□□ -0.22
CACNA1C-230ENST00000543114 OR5I1Q13606 314 aa13.65□□□□□ -0.22
CACNA1C-230ENST00000543114 ZNF846Q147U1 533 aa13.65□□□□□ -0.22
CACNA1C-230ENST00000543114 DNAH5Q8TE73 4624 aa13.64□□□□□ -0.23
CACNA1C-230ENST00000543114 GAGE12BA1L429 117 aa13.64□□□□□ -0.23
CACNA1C-230ENST00000543114 NPIPB6E9PJ23 425 aa13.64□□□□□ -0.23
CACNA1C-230ENST00000543114 GAGE7O76087 117 aa13.64□□□□□ -0.23
CACNA1C-230ENST00000543114 GAGE12FP0CL80 117 aa13.64□□□□□ -0.23
CACNA1C-230ENST00000543114 GAGE12GP0CL81 117 aa13.64□□□□□ -0.23
CACNA1C-230ENST00000543114 GAGE12IP0CL82 117 aa13.64□□□□□ -0.23
CACNA1C-230ENST00000543114 CT45A10P0DMU9 189 aa13.64□□□□□ -0.23
CACNA1C-230ENST00000543114 BCAP31P51572 246 aa13.64□□□□□ -0.23
CACNA1C-230ENST00000543114 CNPY1Q3B7I2 92 aa13.64□□□□□ -0.23
CACNA1C-230ENST00000543114 GNPNAT1Q96EK6 184 aaPredicted RBP13.64□□□□□ -0.23
CACNA1C-230ENST00000543114 ODF3Q96PU9 254 aa13.64□□□□□ -0.23
CACNA1C-230ENST00000543114 SEC22CQ9BRL7 303 aa13.64□□□□□ -0.23
CACNA1C-230ENST00000543114 KRTAP1-5Q9BYS1 174 aa13.64□□□□□ -0.23
CACNA1C-230ENST00000543114 DNAJC4Q9NNZ3 241 aa13.64□□□□□ -0.23
CACNA1C-230ENST00000543114 UQCC1Q9NVA1 299 aa13.64□□□□□ -0.23
CACNA1C-230ENST00000543114 WDR83OSQ9Y284 106 aa13.64□□□□□ -0.23
CACNA1C-230ENST00000543114 TRAV6A0A075B6T7 132 aa13.63□□□□□ -0.23
CACNA1C-230ENST00000543114 TRAV12-3A0A0B4J271 114 aa13.63□□□□□ -0.23
CACNA1C-230ENST00000543114 A0A0J9YY99 117 aa13.63□□□□□ -0.23
CACNA1C-230ENST00000543114 UBE2L5PA0A1B0GUS4 154 aa13.63□□□□□ -0.23
CACNA1C-230ENST00000543114 FAM24AA6NFZ4 105 aa13.63□□□□□ -0.23
CACNA1C-230ENST00000543114 LYRM1O43325 122 aa13.63□□□□□ -0.23
CACNA1C-230ENST00000543114 RLN2P04090 185 aa13.63□□□□□ -0.23
CACNA1C-230ENST00000543114 M6PRP20645 277 aa13.63□□□□□ -0.23
CACNA1C-230ENST00000543114 RAB31Q13636 194 aa13.63□□□□□ -0.23
CACNA1C-230ENST00000543114 Q6ZRG5 221 aa13.63□□□□□ -0.23
CACNA1C-230ENST00000543114 CCDC28AQ8IWP9 274 aa13.63□□□□□ -0.23
CACNA1C-230ENST00000543114 ZNF586Q9NXT0 402 aa13.63□□□□□ -0.23
CACNA1C-230ENST00000543114 SNURFLB1AK76 121 aa13.62□□□□□ -0.23
CACNA1C-230ENST00000543114 TCRBP04435 133 aa13.62□□□□□ -0.23
CACNA1C-230ENST00000543114 LEPP41159 167 aa13.62□□□□□ -0.23
CACNA1C-230ENST00000543114 GUK1Q16774 197 aa13.62□□□□□ -0.23
CACNA1C-230ENST00000543114 VWC2Q2TAL6 325 aa13.62□□□□□ -0.23
CACNA1C-230ENST00000543114 OR1L4Q8NGR5 311 aa13.62□□□□□ -0.23
CACNA1C-230ENST00000543114 RXFP4Q8TDU9 374 aa13.62□□□□□ -0.23
CACNA1C-230ENST00000543114 ZNF431Q8TF32 576 aaPredicted RBP13.62□□□□□ -0.23
CACNA1C-230ENST00000543114 NUDT15Q9NV35 164 aa13.62□□□□□ -0.23
CACNA1C-230ENST00000543114 C5orf51A6NDU8 294 aa13.61□□□□□ -0.23
CACNA1C-230ENST00000543114 M0R3E3 92 aa13.61□□□□□ -0.23
CACNA1C-230ENST00000543114 ZNF503Q96F45 646 aa13.61□□□□□ -0.23
CACNA1C-230ENST00000543114 TMPRSS5Q9H3S3 457 aa13.61□□□□□ -0.23
CACNA1C-230ENST00000543114 Q9H8V8 135 aa13.61□□□□□ -0.23
CACNA1C-230ENST00000543114 SLC39A9Q9NUM3 307 aa13.61□□□□□ -0.23
CACNA1C-230ENST00000543114 IGSF23A1L1A6 192 aa13.6□□□□□ -0.23
CACNA1C-230ENST00000543114 ZNF253O75346 499 aa13.6□□□□□ -0.23
CACNA1C-230ENST00000543114 BAXQ07812 192 aa13.6□□□□□ -0.23
CACNA1C-230ENST00000543114 Q6ZTI0 123 aa13.6□□□□□ -0.23
CACNA1C-230ENST00000543114 PFDN5Q99471 154 aa13.6□□□□□ -0.23
CACNA1C-230ENST00000543114 PYGO2Q9BRQ0 406 aa13.6□□□□□ -0.23
CACNA1C-230ENST00000543114 LYRM2Q9NU23 88 aaPredicted RBP13.6□□□□□ -0.23
CACNA1C-230ENST00000543114 TRBV19A0A075B6N1 114 aa13.59□□□□□ -0.23
CACNA1C-230ENST00000543114 CDK2AP2O75956 126 aa13.59□□□□□ -0.23
CACNA1C-230ENST00000543114 RPL29P47914 159 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-230ENST00000543114 SULT1A1P50225 295 aa13.59□□□□□ -0.23
CACNA1C-230ENST00000543114 S100A10P60903 97 aa13.59□□□□□ -0.23
CACNA1C-230ENST00000543114 MRPL53Q96EL3 112 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-230ENST00000543114 C2orf50Q96LR7 162 aa13.59□□□□□ -0.23
CACNA1C-230ENST00000543114 UPK3BQ9BT76 320 aa13.59□□□□□ -0.23
CACNA1C-230ENST00000543114 Q9H3A6 140 aa13.59□□□□□ -0.23
CACNA1C-230ENST00000543114 NDUFB4O95168 129 aa13.58□□□□□ -0.24
CACNA1C-230ENST00000543114 PVALBP20472 110 aaPredicted RBP13.58□□□□□ -0.24
CACNA1C-230ENST00000543114 DAZ2Q13117 558 aaKnown RBP13.58□□□□□ -0.24
CACNA1C-230ENST00000543114 ERCC8Q13216 396 aa13.58□□□□□ -0.24
CACNA1C-230ENST00000543114 RAB32Q13637 225 aa13.58□□□□□ -0.24
CACNA1C-230ENST00000543114 ESRGQ1W209 222 aa13.58□□□□□ -0.24
CACNA1C-230ENST00000543114 TTC32Q5I0X7 151 aa13.58□□□□□ -0.24
CACNA1C-230ENST00000543114 C12orf45Q8N5I9 185 aaPredicted RBP13.58□□□□□ -0.24
CACNA1C-230ENST00000543114 TMEM252Q8N6L7 170 aa13.58□□□□□ -0.24
CACNA1C-230ENST00000543114 C11orf72Q8NBR9 251 aa13.58□□□□□ -0.24
CACNA1C-230ENST00000543114 H3BNG1 76 aa13.57□□□□□ -0.24
CACNA1C-230ENST00000543114 PYYP10082 97 aa13.57□□□□□ -0.24
CACNA1C-230ENST00000543114 FGF7P21781 194 aa13.57□□□□□ -0.24
CACNA1C-230ENST00000543114 IL15RAQ13261 267 aa13.57□□□□□ -0.24
CACNA1C-230ENST00000543114 BTN1A1Q13410 526 aa13.57□□□□□ -0.24
CACNA1C-230ENST00000543114 GSN-AS1Q9NRJ2 163 aa13.57□□□□□ -0.24
CACNA1C-230ENST00000543114 MRPS16Q9Y3D3 137 aaKnown RBP13.57□□□□□ -0.24
CACNA1C-230ENST00000543114 C7orf71A4D174 169 aa13.56□□□□□ -0.24
CACNA1C-230ENST00000543114 KLLNB2CW77 178 aa13.56□□□□□ -0.24
CACNA1C-230ENST00000543114 SLC25A5P05141 298 aaKnown RBP13.56□□□□□ -0.24
CACNA1C-230ENST00000543114 S100A11P31949 105 aa13.56□□□□□ -0.24
CACNA1C-230ENST00000543114 GCSAMLQ5JQS6 135 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms