RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 TMEM263Q8WUH6 116 aaKnown RBP13.82□□□□□ -0.2
DDX11-220ENST00000542244 SLC50A1Q9BRV3 221 aa13.82□□□□□ -0.2
DDX11-220ENST00000542244 GGACTQ9BVM4 153 aa13.82□□□□□ -0.2
DDX11-220ENST00000542244 A0A0J9YY99 117 aa13.81□□□□□ -0.2
DDX11-220ENST00000542244 IGSF23A1L1A6 192 aa13.81□□□□□ -0.2
DDX11-220ENST00000542244 GAGE12BA1L429 117 aa13.81□□□□□ -0.2
DDX11-220ENST00000542244 H7BYZ3 331 aa13.81□□□□□ -0.2
DDX11-220ENST00000542244 GAGE7O76087 117 aa13.81□□□□□ -0.2
DDX11-220ENST00000542244 TCRBP04435 133 aa13.81□□□□□ -0.2
DDX11-220ENST00000542244 GAGE12FP0CL80 117 aa13.81□□□□□ -0.2
DDX11-220ENST00000542244 GAGE12GP0CL81 117 aa13.81□□□□□ -0.2
DDX11-220ENST00000542244 GAGE12IP0CL82 117 aa13.81□□□□□ -0.2
DDX11-220ENST00000542244 BCAP31P51572 246 aa13.81□□□□□ -0.2
DDX11-220ENST00000542244 FAM3BP58499 235 aaPredicted RBP13.81□□□□□ -0.2
DDX11-220ENST00000542244 SOHLH1Q5JUK2 328 aa13.81□□□□□ -0.2
DDX11-220ENST00000542244 TRAV26-1A0A087WT03 109 aa13.8□□□□□ -0.2
DDX11-220ENST00000542244 TRAV12-3A0A0B4J271 114 aa13.8□□□□□ -0.2
DDX11-220ENST00000542244 L7N2F9 121 aa13.8□□□□□ -0.2
DDX11-220ENST00000542244 LYRM1O43325 122 aa13.8□□□□□ -0.2
DDX11-220ENST00000542244 CAV2P51636 162 aa13.8□□□□□ -0.2
DDX11-220ENST00000542244 VAMP2P63027 116 aa13.8□□□□□ -0.2
DDX11-220ENST00000542244 ERCC8Q13216 396 aa13.8□□□□□ -0.2
DDX11-220ENST00000542244 OR5I1Q13606 314 aa13.8□□□□□ -0.2
DDX11-220ENST00000542244 SSX7Q7RTT5 188 aa13.8□□□□□ -0.2
DDX11-220ENST00000542244 C6orf223Q8N319 242 aa13.8□□□□□ -0.2
DDX11-220ENST00000542244 DNAJC4Q9NNZ3 241 aa13.8□□□□□ -0.2
DDX11-220ENST00000542244 WDR83OSQ9Y284 106 aa13.8□□□□□ -0.2
DDX11-220ENST00000542244 NPIPB6E9PJ23 425 aa13.79□□□□□ -0.2
DDX11-220ENST00000542244 M0R3E3 92 aa13.79□□□□□ -0.2
DDX11-220ENST00000542244 IL15RAQ13261 267 aa13.79□□□□□ -0.2
DDX11-220ENST00000542244 ZNF493Q6ZR52 646 aa13.79□□□□□ -0.2
DDX11-220ENST00000542244 OR10J6PQ8NGY7 276 aa13.79□□□□□ -0.2
DDX11-220ENST00000542244 ZNF431Q8TF32 576 aaPredicted RBP13.79□□□□□ -0.2
DDX11-220ENST00000542244 C5orf51A6NDU8 294 aa13.78□□□□□ -0.2
DDX11-220ENST00000542244 NDUFB4O95168 129 aa13.78□□□□□ -0.2
DDX11-220ENST00000542244 VWC2Q2TAL6 325 aa13.78□□□□□ -0.2
DDX11-220ENST00000542244 GCSAMLQ5JQS6 135 aa13.78□□□□□ -0.2
DDX11-220ENST00000542244 Q6ZQT7 251 aa13.78□□□□□ -0.2
DDX11-220ENST00000542244 S100A7AQ86SG5 101 aa13.78□□□□□ -0.2
DDX11-220ENST00000542244 NUDT15Q9NV35 164 aa13.78□□□□□ -0.2
DDX11-220ENST00000542244 UBE2L5PA0A1B0GUS4 154 aa13.77□□□□□ -0.21
DDX11-220ENST00000542244 CCL18P55774 89 aa13.77□□□□□ -0.21
DDX11-220ENST00000542244 ZNF846Q147U1 533 aa13.77□□□□□ -0.21
DDX11-220ENST00000542244 ESRGQ1W209 222 aa13.77□□□□□ -0.21
DDX11-220ENST00000542244 Q6ZTI0 123 aa13.77□□□□□ -0.21
DDX11-220ENST00000542244 C2orf50Q96LR7 162 aa13.77□□□□□ -0.21
DDX11-220ENST00000542244 TMPRSS5Q9H3S3 457 aa13.77□□□□□ -0.21
DDX11-220ENST00000542244 UQCC1Q9NVA1 299 aa13.77□□□□□ -0.21
DDX11-220ENST00000542244 PXMP4Q9Y6I8 212 aa13.77□□□□□ -0.21
DDX11-220ENST00000542244 C16orf90A8MZG2 172 aa13.76□□□□□ -0.21
DDX11-220ENST00000542244 PYYP10082 97 aa13.76□□□□□ -0.21
DDX11-220ENST00000542244 CD300CQ08708 224 aa13.76□□□□□ -0.21
DDX11-220ENST00000542244 RAB32Q13637 225 aa13.76□□□□□ -0.21
DDX11-220ENST00000542244 CLINT1Q14677 625 aa13.76□□□□□ -0.21
DDX11-220ENST00000542244 C12orf45Q8N5I9 185 aaPredicted RBP13.76□□□□□ -0.21
DDX11-220ENST00000542244 TMEM252Q8N6L7 170 aa13.76□□□□□ -0.21
DDX11-220ENST00000542244 GNPNAT1Q96EK6 184 aaPredicted RBP13.76□□□□□ -0.21
DDX11-220ENST00000542244 C20orf144Q9BQM9 153 aa13.76□□□□□ -0.21
DDX11-220ENST00000542244 SLC39A9Q9NUM3 307 aa13.76□□□□□ -0.21
DDX11-220ENST00000542244 S100A10P60903 97 aa13.75□□□□□ -0.21
DDX11-220ENST00000542244 RXFP4Q8TDU9 374 aa13.75□□□□□ -0.21
DDX11-220ENST00000542244 Q9H8V8 135 aa13.75□□□□□ -0.21
DDX11-220ENST00000542244 TRBV19A0A075B6N1 114 aa13.74□□□□□ -0.21
DDX11-220ENST00000542244 M6PRP20645 277 aa13.74□□□□□ -0.21
DDX11-220ENST00000542244 RPL29P47914 159 aaKnown RBP13.74□□□□□ -0.21
DDX11-220ENST00000542244 BAXQ07812 192 aa13.74□□□□□ -0.21
DDX11-220ENST00000542244 BTN1A1Q13410 526 aa13.74□□□□□ -0.21
DDX11-220ENST00000542244 CNPY1Q3B7I2 92 aa13.74□□□□□ -0.21
DDX11-220ENST00000542244 Q6ZRG5 221 aa13.74□□□□□ -0.21
DDX11-220ENST00000542244 EXOC3-AS1Q8N2X6 119 aa13.74□□□□□ -0.21
DDX11-220ENST00000542244 C11orf72Q8NBR9 251 aa13.74□□□□□ -0.21
DDX11-220ENST00000542244 VSIG2Q96IQ7 327 aa13.74□□□□□ -0.21
DDX11-220ENST00000542244 GSN-AS1Q9NRJ2 163 aa13.74□□□□□ -0.21
DDX11-220ENST00000542244 LYRM2Q9NU23 88 aaPredicted RBP13.74□□□□□ -0.21
DDX11-220ENST00000542244 RNF24Q9Y225 148 aa13.74□□□□□ -0.21
DDX11-220ENST00000542244 APOBP04114 4563 aaKnown RBP13.74□□□□□ -0.21
DDX11-220ENST00000542244 RLN2P04090 185 aa13.73□□□□□ -0.21
DDX11-220ENST00000542244 H2AFB2P0C5Z0 115 aa13.73□□□□□ -0.21
DDX11-220ENST00000542244 FGF7P21781 194 aa13.73□□□□□ -0.21
DDX11-220ENST00000542244 LEPP41159 167 aa13.73□□□□□ -0.21
DDX11-220ENST00000542244 SULT1A1P50225 295 aa13.73□□□□□ -0.21
DDX11-220ENST00000542244 PRR9Q5T870 116 aa13.73□□□□□ -0.21
DDX11-220ENST00000542244 CCDC28AQ8IWP9 274 aa13.73□□□□□ -0.21
DDX11-220ENST00000542244 OR1L4Q8NGR5 311 aa13.73□□□□□ -0.21
DDX11-220ENST00000542244 FAM19A4Q96LR4 140 aa13.73□□□□□ -0.21
DDX11-220ENST00000542244 AGPAT4-IT1Q9H0P7 198 aa13.73□□□□□ -0.21
DDX11-220ENST00000542244 ZNF324O75467 553 aaPredicted RBP13.72□□□□□ -0.21
DDX11-220ENST00000542244 RAB31Q13636 194 aa13.72□□□□□ -0.21
DDX11-220ENST00000542244 ODF3Q96PU9 254 aa13.72□□□□□ -0.21
DDX11-220ENST00000542244 IGKV2-40A0A087WW87 121 aaPredicted RBP13.71□□□□□ -0.21
DDX11-220ENST00000542244 SNURFLB1AK76 121 aa13.71□□□□□ -0.21
DDX11-220ENST00000542244 SIX6O95475 246 aa13.71□□□□□ -0.21
DDX11-220ENST00000542244 IGKV2D-40P01614 121 aaPredicted RBP13.71□□□□□ -0.21
DDX11-220ENST00000542244 KRTAP10-2P60368 255 aa13.71□□□□□ -0.21
DDX11-220ENST00000542244 NHLH2Q02577 135 aa13.71□□□□□ -0.21
DDX11-220ENST00000542244 GUK1Q16774 197 aa13.71□□□□□ -0.21
DDX11-220ENST00000542244 BLNKQ8WV28 456 aa13.71□□□□□ -0.21
DDX11-220ENST00000542244 SLC25A2Q9BXI2 301 aa13.71□□□□□ -0.21
DDX11-220ENST00000542244 TP53TG3Q9ULZ0 132 aa13.71□□□□□ -0.21
DDX11-220ENST00000542244 KLF12Q9Y4X4 402 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms