RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 SPG11Q96JI7 2443 aa4.01□□□□□ -1.77
DDB1-219ENST00000541513 TACC2O95359 2948 aa4.01□□□□□ -1.77
DDB1-219ENST00000541513 ITPR2Q14571 2701 aa4.01□□□□□ -1.77
DDB1-219ENST00000541513 ASH1LQ9NR48 2969 aaKnown RBP4□□□□□ -1.77
DDB1-219ENST00000541513 ABCA12Q86UK0 2595 aa4□□□□□ -1.77
DDB1-219ENST00000541513 HRNRQ86YZ3 2850 aaPredicted RBP4□□□□□ -1.77
DDB1-219ENST00000541513 EPM2AB3EWF7 344 aa4□□□□□ -1.77
DDB1-219ENST00000541513 LGALS9O00182 355 aa4□□□□□ -1.77
DDB1-219ENST00000541513 GNGT2O14610 69 aa4□□□□□ -1.77
DDB1-219ENST00000541513 COX7A2P2O60397 106 aa4□□□□□ -1.77
DDB1-219ENST00000541513 SERF1AO75920 110 aa4□□□□□ -1.77
DDB1-219ENST00000541513 CGAP01215 116 aa4□□□□□ -1.77
DDB1-219ENST00000541513 HLA-DPB1P04440 258 aa4□□□□□ -1.77
DDB1-219ENST00000541513 GZMBP10144 247 aa4□□□□□ -1.77
DDB1-219ENST00000541513 GUCA1AP43080 201 aaPredicted RBP4□□□□□ -1.77
DDB1-219ENST00000541513 INPP1P49441 399 aa4□□□□□ -1.77
DDB1-219ENST00000541513 THBS3P49746 956 aa4□□□□□ -1.77
DDB1-219ENST00000541513 RPL18Q07020 188 aaKnown RBP4□□□□□ -1.77
DDB1-219ENST00000541513 ABCA11PQ4W5N1 156 aa4□□□□□ -1.77
DDB1-219ENST00000541513 CRIP3Q6Q6R5 217 aa4□□□□□ -1.77
DDB1-219ENST00000541513 HRCT1Q6UXD1 115 aa4□□□□□ -1.77
DDB1-219ENST00000541513 ACP7Q6ZNF0 438 aa4□□□□□ -1.77
DDB1-219ENST00000541513 TCF23Q7RTU1 214 aa4□□□□□ -1.77
DDB1-219ENST00000541513 ATP5L2Q7Z4Y8 100 aa4□□□□□ -1.77
DDB1-219ENST00000541513 LINC00596Q86U02 117 aa4□□□□□ -1.77
DDB1-219ENST00000541513 MDP1Q86V88 176 aa4□□□□□ -1.77
DDB1-219ENST00000541513 EXOC3-AS1Q8N2X6 119 aa4□□□□□ -1.77
DDB1-219ENST00000541513 TTC9CQ8N5M4 171 aa4□□□□□ -1.77
DDB1-219ENST00000541513 SUMF2Q8NBJ7 301 aa4□□□□□ -1.77
DDB1-219ENST00000541513 NUP35Q8NFH5 326 aa4□□□□□ -1.77
DDB1-219ENST00000541513 TMEM147Q9BVK8 224 aa4□□□□□ -1.77
DDB1-219ENST00000541513 SPANXDQ9BXN6 97 aa4□□□□□ -1.77
DDB1-219ENST00000541513 GABARAPL1Q9H0R8 117 aa4□□□□□ -1.77
DDB1-219ENST00000541513 ZNF586Q9NXT0 402 aa4□□□□□ -1.77
DDB1-219ENST00000541513 BET1LQ9NYM9 111 aa4□□□□□ -1.77
DDB1-219ENST00000541513 LAMTOR3Q9UHA4 124 aa4□□□□□ -1.77
DDB1-219ENST00000541513 IER3IP1Q9Y5U9 82 aa4□□□□□ -1.77
DDB1-219ENST00000541513 PXMP4Q9Y6I8 212 aa4□□□□□ -1.77
DDB1-219ENST00000541513 UNC79Q9P2D8 2635 aa4□□□□□ -1.77
DDB1-219ENST00000541513 TRAV27A0A087WT01 109 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 G3V3Q6 166 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 H7BYZ3 331 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 OVOL1O14753 267 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 NPFFO15130 113 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 BCL2L11O43521 198 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 CD5LO43866 347 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 MRPL33O75394 65 aaKnown RBP3.99□□□□□ -1.77
DDB1-219ENST00000541513 DPM2O94777 84 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 NDUFB2O95178 105 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 APOMO95445 188 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 CXorf1O96002 111 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 CTSDP07339 412 aaPredicted RBP3.99□□□□□ -1.77
DDB1-219ENST00000541513 CD14P08571 375 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 LINC00694P0DN24 101 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 FXYD6P3P58550 94 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 TPPP2P59282 170 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 TFF3Q07654 80 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 LOXL1Q08397 574 aaPredicted RBP3.99□□□□□ -1.77
DDB1-219ENST00000541513 SLC38A11Q08AI6 406 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 DHRS2Q13268 280 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 KRTAP27-1Q3LI81 207 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 ZNF876PQ49A33 203 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 ZNF705AQ6ZN79 300 aaPredicted RBP3.99□□□□□ -1.77
DDB1-219ENST00000541513 ZNF497Q6ZNH5 498 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 AAED1Q7RTV5 226 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 ZNF429Q86V71 674 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 SGPP2Q8IWX5 399 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 HIST3H2BBQ8N257 126 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 ANKRD29Q8N6D5 301 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 CNEP1R1Q8N9A8 125 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 ZNF555Q8NEP9 628 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 OR10G2Q8NGC3 310 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 RHOXF1Q8NHV9 184 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 TIMM17AQ99595 171 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 ADAT1Q9BUB4 502 aaKnown RBP3.99□□□□□ -1.77
DDB1-219ENST00000541513 GGTLC1Q9BX51 225 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 CACNG5Q9UF02 275 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 LRBAP50851 2863 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 APCP25054 2843 aa3.99□□□□□ -1.77
DDB1-219ENST00000541513 ANKRD17O75179 2603 aaKnown RBP3.98□□□□□ -1.77
DDB1-219ENST00000541513 IGLV7-46A0A075B6I9 117 aa3.98□□□□□ -1.77
DDB1-219ENST00000541513 BMPR1BO00238 502 aa3.98□□□□□ -1.77
DDB1-219ENST00000541513 SRSF10O75494 262 aaKnown RBP3.98□□□□□ -1.77
DDB1-219ENST00000541513 FSTL3O95633 263 aa3.98□□□□□ -1.77
DDB1-219ENST00000541513 ZNF728P0DKX0 622 aa3.98□□□□□ -1.77
DDB1-219ENST00000541513 SCGB1C2P0DMR2 95 aa3.98□□□□□ -1.77
DDB1-219ENST00000541513 DAPP51397 102 aa3.98□□□□□ -1.77
DDB1-219ENST00000541513 ENDOGQ14249 297 aaKnown RBP3.98□□□□□ -1.77
DDB1-219ENST00000541513 MMDQ15546 238 aa3.98□□□□□ -1.77
DDB1-219ENST00000541513 LRP11Q86VZ4 500 aa3.98□□□□□ -1.77
DDB1-219ENST00000541513 YIPF7Q8N8F6 280 aa3.98□□□□□ -1.77
DDB1-219ENST00000541513 BPIFB6Q8NFQ5 453 aa3.98□□□□□ -1.77
DDB1-219ENST00000541513 SCGB1C1Q8TD33 95 aa3.98□□□□□ -1.77
DDB1-219ENST00000541513 RNASE6Q93091 150 aaKnown RBP3.98□□□□□ -1.77
DDB1-219ENST00000541513 KCNIP2Q9NS61 270 aa3.98□□□□□ -1.77
DDB1-219ENST00000541513 RPRMQ9NS64 109 aa3.98□□□□□ -1.77
DDB1-219ENST00000541513 ANAPC10Q9UM13 185 aa3.98□□□□□ -1.77
DDB1-219ENST00000541513 ARID1AO14497 2285 aa3.98□□□□□ -1.77
DDB1-219ENST00000541513 DSCAMO60469 2012 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 NOTCH2Q04721 2471 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms