RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 FAM223AQ8IWN6 122 aa12.06□□□□□ -0.48
SMARCA4-207ENST00000541122 PRSS22Q9GZN4 317 aa12.06□□□□□ -0.48
SMARCA4-207ENST00000541122 SDK2Q58EX2 2172 aa12.06□□□□□ -0.48
SMARCA4-207ENST00000541122 ZNF747Q9BV97 191 aa12.05□□□□□ -0.48
SMARCA4-207ENST00000541122 VMO1Q7Z5L0 202 aa12.05□□□□□ -0.48
SMARCA4-207ENST00000541122 DTX1Q86Y01 620 aa12.05□□□□□ -0.48
SMARCA4-207ENST00000541122 THAP8Q8NA92 274 aa12.05□□□□□ -0.48
SMARCA4-207ENST00000541122 PRSS57Q6UWY2 283 aa12.05□□□□□ -0.48
SMARCA4-207ENST00000541122 ZNF833PQ6ZTB9 187 aa12.05□□□□□ -0.48
SMARCA4-207ENST00000541122 USMG5Q96IX5 58 aa12.05□□□□□ -0.48
SMARCA4-207ENST00000541122 TP53TG1Q9Y2A0 90 aa12.05□□□□□ -0.48
SMARCA4-207ENST00000541122 TRGV4A0A0C4DH28 118 aa12.05□□□□□ -0.48
SMARCA4-207ENST00000541122 CMC4P56277 68 aaPredicted RBP12.05□□□□□ -0.48
SMARCA4-207ENST00000541122 TCF15Q12870 199 aa12.05□□□□□ -0.48
SMARCA4-207ENST00000541122 MDS2Q8NDY4 140 aa12.05□□□□□ -0.48
SMARCA4-207ENST00000541122 GAGE12JA6NER3 117 aa12.04□□□□□ -0.48
SMARCA4-207ENST00000541122 GAGE7O76087 117 aa12.04□□□□□ -0.48
SMARCA4-207ENST00000541122 GAGE12FP0CL80 117 aa12.04□□□□□ -0.48
SMARCA4-207ENST00000541122 GAGE12GP0CL81 117 aa12.04□□□□□ -0.48
SMARCA4-207ENST00000541122 GAGE12IP0CL82 117 aa12.04□□□□□ -0.48
SMARCA4-207ENST00000541122 HLA-DMBP28068 263 aa12.04□□□□□ -0.48
SMARCA4-207ENST00000541122 GAGE4Q13068 117 aa12.04□□□□□ -0.48
SMARCA4-207ENST00000541122 Q8NFD4 153 aa12.04□□□□□ -0.48
SMARCA4-207ENST00000541122 TRPM7Q96QT4 1865 aa12.04□□□□□ -0.48
SMARCA4-207ENST00000541122 ZNF672Q499Z4 452 aaPredicted RBP12.04□□□□□ -0.48
SMARCA4-207ENST00000541122 CHCHD5Q9BSY4 110 aa12.04□□□□□ -0.48
SMARCA4-207ENST00000541122 Q0VFX4 171 aa12.04□□□□□ -0.48
SMARCA4-207ENST00000541122 H3BMG7 143 aa12.04□□□□□ -0.48
SMARCA4-207ENST00000541122 C12orf74Q32Q52 190 aa12.04□□□□□ -0.48
SMARCA4-207ENST00000541122 C8orf49Q96NF6 230 aa12.04□□□□□ -0.48
SMARCA4-207ENST00000541122 PRADC1Q9BSG0 188 aa12.04□□□□□ -0.48
SMARCA4-207ENST00000541122 POU2AF1Q16633 256 aa12.03□□□□□ -0.48
SMARCA4-207ENST00000541122 LCNL1Q6ZST4 164 aa12.03□□□□□ -0.48
SMARCA4-207ENST00000541122 FXYD5Q96DB9 178 aa12.03□□□□□ -0.48
SMARCA4-207ENST00000541122 JPT2Q9H910 190 aa12.03□□□□□ -0.48
SMARCA4-207ENST00000541122 MRPL35Q9NZE8 188 aaKnown RBP12.03□□□□□ -0.48
SMARCA4-207ENST00000541122 LTAP01374 205 aa12.03□□□□□ -0.48
SMARCA4-207ENST00000541122 PRR25Q96S07 402 aa12.03□□□□□ -0.48
SMARCA4-207ENST00000541122 SPXQ9BT56 116 aa12.03□□□□□ -0.48
SMARCA4-207ENST00000541122 PLXNA4Q9HCM2 1894 aa12.03□□□□□ -0.48
SMARCA4-207ENST00000541122 DOCK11Q5JSL3 2073 aa12.03□□□□□ -0.48
SMARCA4-207ENST00000541122 K7EM74 188 aa12.03□□□□□ -0.48
SMARCA4-207ENST00000541122 PRB4P10163 310 aaPredicted RBP12.03□□□□□ -0.48
SMARCA4-207ENST00000541122 CEACAM8P31997 349 aaPredicted RBP12.03□□□□□ -0.48
SMARCA4-207ENST00000541122 PRIMA1Q86XR5 153 aa12.03□□□□□ -0.48
SMARCA4-207ENST00000541122 VWC2LB2RUY7 222 aa12.03□□□□□ -0.48
SMARCA4-207ENST00000541122 H3BRN7 92 aa12.03□□□□□ -0.48
SMARCA4-207ENST00000541122 NDUFS7O75251 213 aa12.02□□□□□ -0.48
SMARCA4-207ENST00000541122 FGF6P10767 208 aa12.02□□□□□ -0.48
SMARCA4-207ENST00000541122 ERCC8Q13216 396 aa12.02□□□□□ -0.48
SMARCA4-207ENST00000541122 RTTNQ86VV8 2226 aa12.02□□□□□ -0.48
SMARCA4-207ENST00000541122 GAGE5Q13069 117 aa12.02□□□□□ -0.49
SMARCA4-207ENST00000541122 GAGE6Q13070 117 aa12.02□□□□□ -0.49
SMARCA4-207ENST00000541122 SHISA9B4DS77 424 aa12.02□□□□□ -0.49
SMARCA4-207ENST00000541122 LYNX1G3V0Z9 82 aa12.02□□□□□ -0.49
SMARCA4-207ENST00000541122 SOCS3O14543 225 aa12.02□□□□□ -0.49
SMARCA4-207ENST00000541122 NPYP01303 97 aa12.02□□□□□ -0.49
SMARCA4-207ENST00000541122 PF4P02776 101 aa12.02□□□□□ -0.49
SMARCA4-207ENST00000541122 LYNX1P0DP58 116 aa12.02□□□□□ -0.49
SMARCA4-207ENST00000541122 SRD5A1P18405 259 aa12.02□□□□□ -0.49
SMARCA4-207ENST00000541122 MBD3L4A6NDZ8 208 aaPredicted RBP12.02□□□□□ -0.49
SMARCA4-207ENST00000541122 MBD3L3A6NE82 208 aaPredicted RBP12.02□□□□□ -0.49
SMARCA4-207ENST00000541122 MBD3L5A6NJ08 208 aaPredicted RBP12.02□□□□□ -0.49
SMARCA4-207ENST00000541122 IGHG3P01860 377 aa12.02□□□□□ -0.49
SMARCA4-207ENST00000541122 GATA4P43694 442 aa12.02□□□□□ -0.49
SMARCA4-207ENST00000541122 UNQ6494/PRO21346Q6UXR6 183 aa12.02□□□□□ -0.49
SMARCA4-207ENST00000541122 MBD3L2Q8NHZ7 208 aaPredicted RBP12.02□□□□□ -0.49
SMARCA4-207ENST00000541122 SMIM2Q9BVW6 85 aa12.02□□□□□ -0.49
SMARCA4-207ENST00000541122 LAMTOR3Q9UHA4 124 aa12.02□□□□□ -0.49
SMARCA4-207ENST00000541122 A0A087WX48 190 aa12.01□□□□□ -0.49
SMARCA4-207ENST00000541122 K7EMI3 77 aa12.01□□□□□ -0.49
SMARCA4-207ENST00000541122 FCN3O75636 299 aa12.01□□□□□ -0.49
SMARCA4-207ENST00000541122 LINC00311Q8N616 119 aa12.01□□□□□ -0.49
SMARCA4-207ENST00000541122 Q8TCH9 128 aa12.01□□□□□ -0.49
SMARCA4-207ENST00000541122 IGFL4Q6B9Z1 124 aa12.01□□□□□ -0.49
SMARCA4-207ENST00000541122 C20orf78Q9BR46 151 aa12.01□□□□□ -0.49
SMARCA4-207ENST00000541122 RSPO1Q2MKA7 263 aaPredicted RBP12□□□□□ -0.49
SMARCA4-207ENST00000541122 CITED1Q99966 193 aa12□□□□□ -0.49
SMARCA4-207ENST00000541122 C15orf65H3BRN8 121 aa12□□□□□ -0.49
SMARCA4-207ENST00000541122 C3orf36Q3SXR2 165 aa12□□□□□ -0.49
SMARCA4-207ENST00000541122 ZC2HC1AQ96GY0 325 aa12□□□□□ -0.49
SMARCA4-207ENST00000541122 PLA2G2EQ9NZK7 142 aa12□□□□□ -0.49
SMARCA4-207ENST00000541122 FANCMQ8IYD8 2048 aa11.99□□□□□ -0.49
SMARCA4-207ENST00000541122 K7ERJ3 54 aa11.99□□□□□ -0.49
SMARCA4-207ENST00000541122 DTX2Q86UW9 622 aa11.99□□□□□ -0.49
SMARCA4-207ENST00000541122 VWA8A3KMH1 1905 aa11.99□□□□□ -0.49
SMARCA4-207ENST00000541122 RNASE8Q8TDE3 154 aaKnown RBP11.99□□□□□ -0.49
SMARCA4-207ENST00000541122 RHODO00212 210 aa11.99□□□□□ -0.49
SMARCA4-207ENST00000541122 IGHG4P01861 327 aa11.99□□□□□ -0.49
SMARCA4-207ENST00000541122 FAM110DQ8TAY7 271 aaPredicted RBP11.99□□□□□ -0.49
SMARCA4-207ENST00000541122 LINC01545Q5VT33 79 aa11.99□□□□□ -0.49
SMARCA4-207ENST00000541122 SPTA1P02549 2419 aa11.99□□□□□ -0.49
SMARCA4-207ENST00000541122 CEP290O15078 2479 aa11.98□□□□□ -0.49
SMARCA4-207ENST00000541122 A0A087WWL8 130 aa11.98□□□□□ -0.49
SMARCA4-207ENST00000541122 TRACP01848 142 aa11.98□□□□□ -0.49
SMARCA4-207ENST00000541122 NDPQ00604 133 aa11.98□□□□□ -0.49
SMARCA4-207ENST00000541122 SCRT2Q9NQ03 307 aa11.98□□□□□ -0.49
SMARCA4-207ENST00000541122 I3L3M4 83 aa11.98□□□□□ -0.49
SMARCA4-207ENST00000541122 C17orf58Q2M2W7 97 aa11.98□□□□□ -0.49
SMARCA4-207ENST00000541122 IL17RELQ6ZVW7 336 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms