RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 AAMDCQ9H7C9 122 aa5.04□□□□□ -1.6
CLTCL1-206ENST00000540896 YTHDF2Q9Y5A9 579 aaKnown RBP5.04□□□□□ -1.6
CLTCL1-206ENST00000540896 SMAD5-AS1Q9Y6J3 95 aa5.04□□□□□ -1.6
CLTCL1-206ENST00000540896 TRBV19A0A075B6N1 114 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 PGPA6NDG6 321 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 F6UZH7 168 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 DNASE2O00115 360 aaPredicted RBP5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 PDE6DO43924 150 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 SAP30O75446 220 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 SLC25A5P05141 298 aaKnown RBP5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 CD5P06127 495 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 CSN1S1P47710 185 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 ATP5G3P48201 142 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 TFPI2P48307 235 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 RBPMS2Q6ZRY4 209 aaKnown RBP5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 EXOC3-AS1Q8N2X6 119 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 GBGT1Q8N5D6 347 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 LINC00482Q8N8I6 264 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 SUN5Q8TC36 379 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 GLMPQ8WWB7 406 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 C16orf92Q96LL3 132 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 SLC35B3Q9H1N7 401 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 Q9H3A6 140 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 SMDT1Q9H4I9 107 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 OTORQ9NRC9 128 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 RPH3ALQ9UNE2 315 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 ARL2-SNX15V9GYD0 113 aa5.03□□□□□ -1.6
CLTCL1-206ENST00000540896 A0A087X0K7 114 aa5.02□□□□□ -1.61
CLTCL1-206ENST00000540896 F8W036 122 aa5.02□□□□□ -1.61
CLTCL1-206ENST00000540896 MRPS12O15235 138 aaKnown RBP5.02□□□□□ -1.61
CLTCL1-206ENST00000540896 NDUFB4O95168 129 aa5.02□□□□□ -1.61
CLTCL1-206ENST00000540896 CSN3P07498 182 aa5.02□□□□□ -1.61
CLTCL1-206ENST00000540896 SFTA3P0C7M3 94 aa5.02□□□□□ -1.61
CLTCL1-206ENST00000540896 ID1P41134 155 aa5.02□□□□□ -1.61
CLTCL1-206ENST00000540896 CD81P60033 236 aa5.02□□□□□ -1.61
CLTCL1-206ENST00000540896 PDE6HQ13956 83 aa5.02□□□□□ -1.61
CLTCL1-206ENST00000540896 SOHLH1Q5JUK2 328 aa5.02□□□□□ -1.61
CLTCL1-206ENST00000540896 SAMD13Q5VXD3 122 aa5.02□□□□□ -1.61
CLTCL1-206ENST00000540896 IGFL4Q6B9Z1 124 aa5.02□□□□□ -1.61
CLTCL1-206ENST00000540896 LYPD1Q8N2G4 141 aa5.02□□□□□ -1.61
CLTCL1-206ENST00000540896 EIF4E3Q8N5X7 224 aaKnown RBP5.02□□□□□ -1.61
CLTCL1-206ENST00000540896 SLC50A1Q9BRV3 221 aa5.02□□□□□ -1.61
CLTCL1-206ENST00000540896 NRN1Q9NPD7 142 aa5.02□□□□□ -1.61
CLTCL1-206ENST00000540896 MLXQ9UH92 298 aa5.02□□□□□ -1.61
CLTCL1-206ENST00000540896 EPDR1Q9UM22 224 aa5.02□□□□□ -1.61
CLTCL1-206ENST00000540896 TMEM218A2RU14 115 aa5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 GGTLC3B5MD39 225 aa5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 C9JQL5 133 aa5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 TMEM250H0YL14 139 aa5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 K7EQM0 130 aa5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 SLC17A3O00476 420 aa5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 ZNF253O75346 499 aa5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 SRP19P09132 144 aaKnown RBP5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 GUCA2BQ16661 112 aa5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 ZNF674Q2M3X9 581 aa5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 DEFB114Q30KQ6 69 aa5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 ADAMTSL5Q6ZMM2 481 aa5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 RNF182Q8N6D2 247 aa5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 CYB561D1Q8N8Q1 229 aa5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 C5orf17Q8NAS9 161 aa5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 HIST1H2BAQ96A08 127 aa5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 RPUSD4Q96CM3 377 aaKnown RBP5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 LINC00052Q96N35 136 aa5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 MS4A6AQ9H2W1 248 aa5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 ZNF331Q9NQX6 463 aaPredicted RBP5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 PLA2G2DQ9UNK4 145 aa5.01□□□□□ -1.61
CLTCL1-206ENST00000540896 TRRAPQ9Y4A5 3859 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 ZNF727A8MUV8 499 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 KRBOX1C9JBD0 128 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 PEX7O00628 323 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 ISLRO14498 428 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 ATP6V1G1O75348 118 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 AKR1C3P42330 323 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 CNN1P51911 297 aaKnown RBP5□□□□□ -1.61
CLTCL1-206ENST00000540896 UBE2G1P62253 170 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 SNRPD3P62318 126 aaKnown RBP5□□□□□ -1.61
CLTCL1-206ENST00000540896 GNG5P63218 68 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 PSG3Q16557 428 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 CD300EQ496F6 205 aaPredicted RBP5□□□□□ -1.61
CLTCL1-206ENST00000540896 FAM90A2PQ658T7 463 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 LCN12Q6JVE5 192 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 ZNF738Q8NE65 137 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 SMIM7Q9BQ49 75 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 TCEAL7Q9BRU2 100 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 CLEC5AQ9NY25 188 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 PRELID1Q9Y255 219 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 VWFP04275 2813 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 PKD1L1Q8TDX9 2849 aa5□□□□□ -1.61
CLTCL1-206ENST00000540896 TRAV8-2A0A0B4J237 113 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 TRAV25A0A0B4J276 109 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 OR4C46A6NHA9 309 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 ZNF705FA8MVS1 300 aaPredicted RBP4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 DIRC3C9JPN6 131 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 M0R3E3 92 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 TSPAN4O14817 238 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 APOC3P02656 99 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 TCRAP04437 139 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 S100A9P06702 114 aaKnown RBP4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 PRB4P10163 310 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms