RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 SHBGP04278 402 aa3.21□□□□□ -1.9
PRKDC-209ENST00000540819 PKIAP61925 76 aa3.21□□□□□ -1.9
PRKDC-209ENST00000540819 RELAQ04206 551 aa3.21□□□□□ -1.9
PRKDC-209ENST00000540819 EIF4EBP1Q13541 118 aaPredicted RBP3.21□□□□□ -1.9
PRKDC-209ENST00000540819 ESRGQ1W209 222 aa3.21□□□□□ -1.9
PRKDC-209ENST00000540819 Q6P435 159 aa3.21□□□□□ -1.9
PRKDC-209ENST00000540819 TAS2R4Q9NYW5 299 aa3.21□□□□□ -1.9
PRKDC-209ENST00000540819 LY96Q9Y6Y9 160 aa3.21□□□□□ -1.9
PRKDC-209ENST00000540819 HSPE1-MOB4S4R3N1 261 aa3.21□□□□□ -1.9
PRKDC-209ENST00000540819 CPAMD8Q8IZJ3 1885 aa3.21□□□□□ -1.9
PRKDC-209ENST00000540819 TTC37Q6PGP7 1564 aa3.21□□□□□ -1.9
PRKDC-209ENST00000540819 C17orf112F2Z3M2 114 aa3.2□□□□□ -1.9
PRKDC-209ENST00000540819 CCL25O15444 150 aa3.2□□□□□ -1.9
PRKDC-209ENST00000540819 RBP4P02753 201 aa3.2□□□□□ -1.9
PRKDC-209ENST00000540819 CTSDP07339 412 aaPredicted RBP3.2□□□□□ -1.9
PRKDC-209ENST00000540819 BLCAPP62952 87 aa3.2□□□□□ -1.9
PRKDC-209ENST00000540819 NNATQ16517 81 aa3.2□□□□□ -1.9
PRKDC-209ENST00000540819 CLLU1Q5K131 121 aa3.2□□□□□ -1.9
PRKDC-209ENST00000540819 LINC01545Q5VT33 79 aa3.2□□□□□ -1.9
PRKDC-209ENST00000540819 C10orf111Q8N326 155 aa3.2□□□□□ -1.9
PRKDC-209ENST00000540819 KCNRGQ8N5I3 272 aa3.2□□□□□ -1.9
PRKDC-209ENST00000540819 Q8N9L7 120 aa3.2□□□□□ -1.9
PRKDC-209ENST00000540819 COPS9Q8WXC6 57 aa3.2□□□□□ -1.9
PRKDC-209ENST00000540819 TPRKBQ9Y3C4 175 aa3.2□□□□□ -1.9
PRKDC-209ENST00000540819 A2ML1A8K2U0 1454 aa3.2□□□□□ -1.9
PRKDC-209ENST00000540819 PLXNA3P51805 1871 aa3.2□□□□□ -1.9
PRKDC-209ENST00000540819 ARHGAP32A7KAX9 2087 aa3.2□□□□□ -1.9
PRKDC-209ENST00000540819 TRAV12-2A0A075B6T6 113 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 A0A0J9YX75 114 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 PNMA8CA0A1B0GUJ8 204 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 FNDC10F2Z333 226 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 CCDC179H3BU77 68 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 RPL36A-HNRNPH2H7BZ11 118 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 ZNF737O75373 536 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 CD3DP04234 171 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 SLC25A4P12235 298 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 TPPP2P59282 170 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 PCBD1P61457 104 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 CDK6Q00534 326 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 ZNF90Q03938 601 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 ASB16-AS1Q495Z4 193 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 GTF2H5Q6ZYL4 71 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 Q8IYB0 196 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 POP5Q969H6 163 aaKnown RBP3.19□□□□□ -1.9
PRKDC-209ENST00000540819 PRR34Q9NV39 138 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 TP53TG3Q9ULZ0 132 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 LSM2Q9Y333 95 aaKnown RBP3.19□□□□□ -1.9
PRKDC-209ENST00000540819 IER3IP1Q9Y5U9 82 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 R4GN34 69 aa3.19□□□□□ -1.9
PRKDC-209ENST00000540819 SCAF11Q99590 1463 aaKnown RBP3.19□□□□□ -1.9
PRKDC-209ENST00000540819 PZPP20742 1482 aa3.18□□□□□ -1.9
PRKDC-209ENST00000540819 A0A1B0GVG6 124 aa3.18□□□□□ -1.9
PRKDC-209ENST00000540819 TNFP01375 233 aa3.18□□□□□ -1.9
PRKDC-209ENST00000540819 PEBP1P30086 187 aaKnown RBP3.18□□□□□ -1.9
PRKDC-209ENST00000540819 SS18Q15532 418 aa3.18□□□□□ -1.9
PRKDC-209ENST00000540819 SPANXN5Q5MJ07 72 aa3.18□□□□□ -1.9
PRKDC-209ENST00000540819 OR5AS1Q8N127 324 aa3.18□□□□□ -1.9
PRKDC-209ENST00000540819 Q8N2B8 174 aa3.18□□□□□ -1.9
PRKDC-209ENST00000540819 CLEC2BQ92478 149 aa3.18□□□□□ -1.9
PRKDC-209ENST00000540819 HYLS1Q96M11 299 aa3.18□□□□□ -1.9
PRKDC-209ENST00000540819 C14orf132Q9NPU4 83 aa3.18□□□□□ -1.9
PRKDC-209ENST00000540819 FKBP11Q9NYL4 201 aa3.18□□□□□ -1.9
PRKDC-209ENST00000540819 RPL26L1Q9UNX3 145 aaKnown RBP3.18□□□□□ -1.9
PRKDC-209ENST00000540819 ZFYVE16Q7Z3T8 1539 aa3.18□□□□□ -1.9
PRKDC-209ENST00000540819 ADGRB1O14514 1584 aa3.17□□□□□ -1.9
PRKDC-209ENST00000540819 SCN3AQ9NY46 2000 aa3.17□□□□□ -1.9
PRKDC-209ENST00000540819 M0R129 80 aa3.17□□□□□ -1.9
PRKDC-209ENST00000540819 TRACP01848 142 aa3.17□□□□□ -1.9
PRKDC-209ENST00000540819 CD14P08571 375 aa3.17□□□□□ -1.9
PRKDC-209ENST00000540819 ROMO1P60602 79 aa3.17□□□□□ -1.9
PRKDC-209ENST00000540819 IGFL3Q6UXB1 125 aa3.17□□□□□ -1.9
PRKDC-209ENST00000540819 ZNF826PQ6ZT77 177 aa3.17□□□□□ -1.9
PRKDC-209ENST00000540819 MRPL57Q9BQC6 102 aaKnown RBP3.17□□□□□ -1.9
PRKDC-209ENST00000540819 CXCL16Q9H2A7 254 aa3.17□□□□□ -1.9
PRKDC-209ENST00000540819 NAA60Q9H7X0 242 aa3.17□□□□□ -1.9
PRKDC-209ENST00000540819 RPRMQ9NS64 109 aa3.17□□□□□ -1.9
PRKDC-209ENST00000540819 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
PRKDC-209ENST00000540819 ATRXP46100 2492 aa3.17□□□□□ -1.9
PRKDC-209ENST00000540819 AKAP12Q02952 1782 aa3.17□□□□□ -1.9
PRKDC-209ENST00000540819 MYLKQ15746 1914 aa3.17□□□□□ -1.9
PRKDC-209ENST00000540819 KIAA2026Q5HYC2 2103 aa3.16□□□□□ -1.9
PRKDC-209ENST00000540819 MAPKBP1O60336 1514 aa3.16□□□□□ -1.9
PRKDC-209ENST00000540819 IGLV4-60A0A075B6I1 120 aa3.16□□□□□ -1.9
PRKDC-209ENST00000540819 hDV103S1A0JD37 113 aa3.16□□□□□ -1.9
PRKDC-209ENST00000540819 COLCA2A8K830 154 aa3.16□□□□□ -1.9
PRKDC-209ENST00000540819 IGLV1-51P01701 117 aa3.16□□□□□ -1.9
PRKDC-209ENST00000540819 PMP2P02689 132 aa3.16□□□□□ -1.9
PRKDC-209ENST00000540819 BAALC-AS2P0C853 105 aa3.16□□□□□ -1.9
PRKDC-209ENST00000540819 ETV6P41212 452 aa3.16□□□□□ -1.9
PRKDC-209ENST00000540819 HSD52Q0P140 79 aa3.16□□□□□ -1.9
PRKDC-209ENST00000540819 CIRBPQ14011 172 aaKnown RBP3.16□□□□□ -1.9
PRKDC-209ENST00000540819 Q6ZUT4 128 aa3.16□□□□□ -1.9
PRKDC-209ENST00000540819 SNX29P2Q8IUI4 249 aa3.16□□□□□ -1.9
PRKDC-209ENST00000540819 LINC00471Q8N535 108 aa3.16□□□□□ -1.9
PRKDC-209ENST00000540819 Q8N814 137 aa3.16□□□□□ -1.9
PRKDC-209ENST00000540819 NABP2Q9BQ15 211 aa3.16□□□□□ -1.9
PRKDC-209ENST00000540819 CACNA1DQ01668 2161 aa3.16□□□□□ -1.9
PRKDC-209ENST00000540819 ALPK3Q96L96 1907 aa3.16□□□□□ -1.9
PRKDC-209ENST00000540819 IGKV1D-42A0A075B6H8 117 aa3.15□□□□□ -1.91
PRKDC-209ENST00000540819 TRAV3A0A0B4J244 114 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms