RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 SNRPD3P62318 126 aaKnown RBP5.15□□□□□ -1.59
YBX3-209ENST00000540747 BAXQ07812 192 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 AKR1C8PQ5T2L2 129 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 FAM222AQ5U5X8 452 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 STX12Q86Y82 276 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 CBLN2Q8IUK8 224 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 UBE2DNLQ8IWF7 75 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 C1orf158Q8N1D5 194 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 NIPSNAP3BQ9BS92 247 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 SAV1Q9H4B6 383 aaPredicted RBP5.15□□□□□ -1.59
YBX3-209ENST00000540747 SMDT1Q9H4I9 107 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 C11orf1Q9H5F2 150 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 RPS10P5Q9NQ39 176 aa5.15□□□□□ -1.59
YBX3-209ENST00000540747 LYRM2Q9NU23 88 aaPredicted RBP5.15□□□□□ -1.59
YBX3-209ENST00000540747 C1orf196B1AJZ1 125 aa5.14□□□□□ -1.59
YBX3-209ENST00000540747 CST7O76096 145 aa5.14□□□□□ -1.59
YBX3-209ENST00000540747 ATP6V0CP27449 155 aa5.14□□□□□ -1.59
YBX3-209ENST00000540747 OR10J1P30954 320 aa5.14□□□□□ -1.59
YBX3-209ENST00000540747 RND2P52198 227 aa5.14□□□□□ -1.59
YBX3-209ENST00000540747 EMP1P54849 157 aa5.14□□□□□ -1.59
YBX3-209ENST00000540747 RAB5BP61020 215 aa5.14□□□□□ -1.59
YBX3-209ENST00000540747 C2orf83Q53S99 150 aa5.14□□□□□ -1.59
YBX3-209ENST00000540747 NMSQ5H8A3 153 aa5.14□□□□□ -1.59
YBX3-209ENST00000540747 DPPA3Q6W0C5 159 aa5.14□□□□□ -1.59
YBX3-209ENST00000540747 C15orf54Q8N8G6 183 aa5.14□□□□□ -1.59
YBX3-209ENST00000540747 OR5C1Q8NGR4 320 aa5.14□□□□□ -1.59
YBX3-209ENST00000540747 OR52E5Q8NH55 327 aa5.14□□□□□ -1.59
YBX3-209ENST00000540747 ZNRF2Q8NHG8 242 aa5.14□□□□□ -1.59
YBX3-209ENST00000540747 ATP5SQ99766 215 aa5.14□□□□□ -1.59
YBX3-209ENST00000540747 SLC35B3Q9H1N7 401 aa5.14□□□□□ -1.59
YBX3-209ENST00000540747 PSENENQ9NZ42 101 aa5.14□□□□□ -1.59
YBX3-209ENST00000540747 NBDYA0A0U1RRE5 68 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 A0A1B0GV50 99 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 C7orf77A4D0Y5 90 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 RBFOX3A6NFN3 312 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 C9JQL5 133 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 SYNGR2O43760 224 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 SCGB2A1O75556 95 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 TOMM40O96008 361 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 IL4P05112 153 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 HOXA1P49639 335 aaPredicted RBP5.13□□□□□ -1.59
YBX3-209ENST00000540747 SULT1A1P50225 295 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 AKR1D1P51857 326 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 PAX9P55771 341 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 TAS2R30P59541 319 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 SPCS3P61009 180 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 AMTNQ6UX39 209 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 SIGLEC15Q6ZMC9 328 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 FOXI2Q6ZQN5 318 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 C15orf53Q8NAA6 179 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 RNASEH2CQ8TDP1 164 aaKnown RBP5.13□□□□□ -1.59
YBX3-209ENST00000540747 Q8WTZ3 238 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 SH3BGRL3Q9H299 93 aa5.13□□□□□ -1.59
YBX3-209ENST00000540747 YTHDF2Q9Y5A9 579 aaKnown RBP5.13□□□□□ -1.59
YBX3-209ENST00000540747 LOC102723971A0A1B0GUV8 181 aa5.12□□□□□ -1.59
YBX3-209ENST00000540747 COLCA2A8K830 154 aa5.12□□□□□ -1.59
YBX3-209ENST00000540747 MT-ND4LP03901 98 aa5.12□□□□□ -1.59
YBX3-209ENST00000540747 PSMB3P49720 205 aa5.12□□□□□ -1.59
YBX3-209ENST00000540747 FHITP49789 147 aa5.12□□□□□ -1.59
YBX3-209ENST00000540747 FXYD7P58549 80 aa5.12□□□□□ -1.59
YBX3-209ENST00000540747 HBG1P69891 147 aa5.12□□□□□ -1.59
YBX3-209ENST00000540747 HBG2P69892 147 aa5.12□□□□□ -1.59
YBX3-209ENST00000540747 RHEBQ15382 184 aa5.12□□□□□ -1.59
YBX3-209ENST00000540747 SPATA31B1PQ5VZV4 182 aa5.12□□□□□ -1.59
YBX3-209ENST00000540747 C6orf223Q8N319 242 aa5.12□□□□□ -1.59
YBX3-209ENST00000540747 RXFP4Q8TDU9 374 aa5.12□□□□□ -1.59
YBX3-209ENST00000540747 SFT2D1Q8WV19 159 aa5.12□□□□□ -1.59
YBX3-209ENST00000540747 C17orf77Q96MU5 243 aa5.12□□□□□ -1.59
YBX3-209ENST00000540747 CACNG5Q9UF02 275 aa5.12□□□□□ -1.59
YBX3-209ENST00000540747 SRRM2Q9UQ35 2752 aaKnown RBP5.12□□□□□ -1.59
YBX3-209ENST00000540747 IGKV1D-37A0A075B6S9 117 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 IGHV3OR16-12A0A075B7B8 117 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 A0A0J9YX75 114 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 PLAC8L1A1L4L8 177 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 IFNA1P01562 189 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 IGKV3-20P01619 116 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 S100A6P06703 90 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 SRP19P09132 144 aaKnown RBP5.11□□□□□ -1.59
YBX3-209ENST00000540747 RD3LP0DJH9 198 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 IAPPP10997 89 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 PSG1P11464 419 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 HTN3P15516 51 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 RPL35P42766 123 aaKnown RBP5.11□□□□□ -1.59
YBX3-209ENST00000540747 PSG9Q00887 426 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 ATP6V1FQ16864 119 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 OR8G2PQ6IF36 304 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 SLC24A4Q8NFF2 622 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 OR51G1Q8NGK1 321 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 NPIPB3Q92617 1050 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 RNF125Q96EQ8 232 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 KRTAP1-5Q9BYS1 174 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 ENY2Q9NPA8 101 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 SCRT2Q9NQ03 307 aa5.11□□□□□ -1.59
YBX3-209ENST00000540747 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.11□□□□□ -1.59
YBX3-209ENST00000540747 TRAV1-1A0A0B4J248 108 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 F6UB75 175 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 H3BP45 60 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 ISLRO14498 428 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 CRXO43186 299 aaPredicted RBP5.1□□□□□ -1.59
YBX3-209ENST00000540747 S100A9P06702 114 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms