RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 C3orf85A0A1B0GTC6 90 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 J3KT08 172 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 CCL16O15467 120 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 TRACP01848 142 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 PAEPP09466 180 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 NBEAP1P0C6P0 100 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 RNASE3P12724 160 aaKnown RBP0.56□□□□□ -2.32
MDM2-227ENST00000540709 FABP4P15090 132 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 CRYGSP22914 178 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 MPV17LQ2QL34 196 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 CCDC153Q494R4 210 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 ARPINQ7Z6K5 226 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 OR8I2Q8N0Y5 310 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 OR51A4Q8NGJ6 313 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 OR5AK2Q8NH90 309 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 Q8TAT8 98 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 MAFIPQ8WZ33 124 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 CST11Q9H112 138 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 WFDC10AQ9H1F0 79 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 FKBP11Q9NYL4 201 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 ZFP30Q9Y2G7 519 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 CHCHD2Q9Y6H1 151 aaPredicted RBP0.56□□□□□ -2.32
MDM2-227ENST00000540709 MYOFQ9NZM1 2061 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 SMARCA4P51532 1647 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 MYH3P11055 1940 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 MYH2Q9UKX2 1941 aa0.56□□□□□ -2.32
MDM2-227ENST00000540709 BCL9O00512 1426 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 CD109Q6YHK3 1445 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 ARHGEF11O15085 1522 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 RP1P56715 2156 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 FREM1Q5H8C1 2179 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 BAZ2BQ9UIF8 2168 aaKnown RBP0.55□□□□□ -2.32
MDM2-227ENST00000540709 RTTNQ86VV8 2226 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 TRBV27A0A0K0K1C4 114 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 LOC107984640A0A0U1RRK4 108 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 LOC107986453A0A1B0GWG9 222 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 TRBV6-4A0A1B0GX49 114 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 C9orf170A2RU37 121 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 PRORSD1PA6NEY8 169 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 BBIP1A8MTZ0 92 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 CCL25O15444 150 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 DPM2O94777 84 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 IGLV1-51P01701 117 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 MT-ND4LP03901 98 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 DBIP07108 87 aaKnown RBP0.55□□□□□ -2.32
MDM2-227ENST00000540709 SCGB1A1P11684 91 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 COX7CP15954 63 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 RPS3P23396 243 aaKnown RBP eCLIP0.55□□□□□ -2.32
MDM2-227ENST00000540709 SDC4P31431 198 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 SRP9P49458 86 aaKnown RBP0.55□□□□□ -2.32
MDM2-227ENST00000540709 FOXA3P55318 350 aaPredicted RBP0.55□□□□□ -2.32
MDM2-227ENST00000540709 MAXP61244 160 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 RPS28P62857 69 aaKnown RBP0.55□□□□□ -2.32
MDM2-227ENST00000540709 PSPHP78330 225 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 MIR22HGQ0VDD5 57 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 NEDD8Q15843 81 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 GDF5OSQ5U4N7 250 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 TMEM244Q5VVB8 128 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 TMEM14EPQ6UXP3 125 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 C3orf62Q6ZUJ4 267 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 OR5AS1Q8N127 324 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 FAM19A2Q8N3H0 131 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 OBSCN-AS1Q96MR7 158 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 LINC00052Q96N35 136 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 TAF9BQ9HBM6 251 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 CBLN4Q9NTU7 201 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 SPANXCQ9NY87 97 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 GSKIPQ9P0R6 139 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 TNFSF18Q9UNG2 199 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 C22orf24Q9Y442 160 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 MYH7BA7E2Y1 1941 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 MYH10P35580 1976 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 RTL9Q8NET4 1388 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 UNC13AQ9UPW8 1703 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 NUMA1Q14980 2115 aa0.55□□□□□ -2.32
MDM2-227ENST00000540709 ZFHX2Q9C0A1 2572 aaPredicted RBP0.54□□□□□ -2.32
MDM2-227ENST00000540709 A2MP01023 1474 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 MGAMO43451 1857 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 HEATR5BQ9P2D3 2071 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 TRAV36DV7A0A075B6V5 113 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 LOC105371267A0A1B0GV96 52 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 TMEM189A5PLL7 270 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 C9JAW5 83 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 ARPC5O15511 151 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 NUPR1O60356 82 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 SMIM24O75264 130 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 PPYP01298 95 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 CKS2P33552 79 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 RPL22P35268 128 aaKnown RBP0.54□□□□□ -2.32
MDM2-227ENST00000540709 GTF2A1P52655 376 aaPredicted RBP0.54□□□□□ -2.32
MDM2-227ENST00000540709 CKS1BP61024 79 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 PCBD1P61457 104 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 BLCAPP62952 87 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 SMCO1Q147U7 214 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 OR8B8Q15620 311 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 ALX1Q15699 326 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 HSD17B12Q53GQ0 312 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 SPRNQ5BIV9 151 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 GLIPR1L1Q6UWM5 242 aa0.54□□□□□ -2.32
MDM2-227ENST00000540709 CASC2Q6XLA1 102 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms