RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 AMMECR1LQ6DCA0 310 aa9.63□□□□□ -0.87
NPC1-202ENST00000540608 ORMDL3Q8N138 153 aa9.63□□□□□ -0.87
NPC1-202ENST00000540608 OR11H6Q8NGC7 330 aa9.63□□□□□ -0.87
NPC1-202ENST00000540608 FANCD2OSQ96PS1 177 aa9.63□□□□□ -0.87
NPC1-202ENST00000540608 S4R3C0 116 aa9.63□□□□□ -0.87
NPC1-202ENST00000540608 IGLV11-55A0A075B6I3 123 aa9.63□□□□□ -0.87
NPC1-202ENST00000540608 SAPCD1Q5SSQ6 148 aa9.63□□□□□ -0.87
NPC1-202ENST00000540608 AMN1Q8IY45 258 aa9.63□□□□□ -0.87
NPC1-202ENST00000540608 ARL6IP6Q8N6S5 226 aa9.63□□□□□ -0.87
NPC1-202ENST00000540608 VKORC1Q9BQB6 163 aa9.63□□□□□ -0.87
NPC1-202ENST00000540608 HILPDAQ9Y5L2 63 aa9.63□□□□□ -0.87
NPC1-202ENST00000540608 TMSB15BA0A087X1C1 80 aa9.62□□□□□ -0.87
NPC1-202ENST00000540608 NPIPB5A8MRT5 1133 aa9.62□□□□□ -0.87
NPC1-202ENST00000540608 K7ENP7 123 aa9.62□□□□□ -0.87
NPC1-202ENST00000540608 FOXE3Q13461 319 aa9.62□□□□□ -0.87
NPC1-202ENST00000540608 LGALS9BQ3B8N2 356 aa9.62□□□□□ -0.87
NPC1-202ENST00000540608 LGALS9CQ6DKI2 356 aa9.62□□□□□ -0.87
NPC1-202ENST00000540608 PIP4P2Q8N4L2 257 aa9.62□□□□□ -0.87
NPC1-202ENST00000540608 OR8A1Q8NGG7 326 aa9.62□□□□□ -0.87
NPC1-202ENST00000540608 OR1N2Q8NGR9 330 aa9.62□□□□□ -0.87
NPC1-202ENST00000540608 FGF6P10767 208 aa9.62□□□□□ -0.87
NPC1-202ENST00000540608 ZNF672Q499Z4 452 aaPredicted RBP9.62□□□□□ -0.87
NPC1-202ENST00000540608 MRPL51Q4U2R6 128 aaKnown RBP9.62□□□□□ -0.87
NPC1-202ENST00000540608 F8W735 103 aaPredicted RBP9.61□□□□□ -0.87
NPC1-202ENST00000540608 CEACAM3P40198 252 aa9.61□□□□□ -0.87
NPC1-202ENST00000540608 SEC11AP67812 179 aa9.61□□□□□ -0.87
NPC1-202ENST00000540608 C5orf64Q2M2E5 130 aa9.61□□□□□ -0.87
NPC1-202ENST00000540608 TMEM97Q5BJF2 176 aa9.61□□□□□ -0.87
NPC1-202ENST00000540608 PRR25Q96S07 402 aa9.61□□□□□ -0.87
NPC1-202ENST00000540608 CSMD1Q96PZ7 3565 aa9.61□□□□□ -0.87
NPC1-202ENST00000540608 FBLL1A6NHQ2 334 aaKnown RBP9.61□□□□□ -0.87
NPC1-202ENST00000540608 FAM90A27PA6NNH2 459 aa9.61□□□□□ -0.87
NPC1-202ENST00000540608 SNAI2O43623 268 aa9.61□□□□□ -0.87
NPC1-202ENST00000540608 PAX8Q06710 450 aa9.61□□□□□ -0.87
NPC1-202ENST00000540608 ANKRD39Q53RE8 183 aa9.61□□□□□ -0.87
NPC1-202ENST00000540608 PEF1Q9UBV8 284 aaKnown RBP9.61□□□□□ -0.87
NPC1-202ENST00000540608 RPL7P18124 248 aaKnown RBP9.6□□□□□ -0.87
NPC1-202ENST00000540608 ZNF562Q6V9R5 426 aa9.6□□□□□ -0.87
NPC1-202ENST00000540608 TTC9CQ8N5M4 171 aa9.6□□□□□ -0.87
NPC1-202ENST00000540608 TPRP12270 2363 aaKnown RBP9.6□□□□□ -0.87
NPC1-202ENST00000540608 IGKV2-40A0A087WW87 121 aaPredicted RBP9.6□□□□□ -0.87
NPC1-202ENST00000540608 LY6HO94772 140 aa9.6□□□□□ -0.87
NPC1-202ENST00000540608 IGKV2D-40P01614 121 aaPredicted RBP9.6□□□□□ -0.87
NPC1-202ENST00000540608 HBDP02042 147 aa9.6□□□□□ -0.87
NPC1-202ENST00000540608 EGR2P11161 476 aaPredicted RBP9.6□□□□□ -0.87
NPC1-202ENST00000540608 CST9LQ9H4G1 147 aa9.6□□□□□ -0.87
NPC1-202ENST00000540608 C21orf62Q9NYP8 219 aa9.6□□□□□ -0.87
NPC1-202ENST00000540608 PTPRQQ9UMZ3 2332 aa9.6□□□□□ -0.87
NPC1-202ENST00000540608 TRAV8-6A0A0B4J262 113 aa9.59□□□□□ -0.87
NPC1-202ENST00000540608 C7orf71A4D174 169 aa9.59□□□□□ -0.87
NPC1-202ENST00000540608 BOD1L2Q8IYS8 172 aa9.59□□□□□ -0.87
NPC1-202ENST00000540608 IGFBPL1Q8WX77 278 aa9.59□□□□□ -0.87
NPC1-202ENST00000540608 MSRB2Q9Y3D2 182 aa9.59□□□□□ -0.87
NPC1-202ENST00000540608 CKS2P33552 79 aa9.59□□□□□ -0.87
NPC1-202ENST00000540608 BMI1P35226 326 aa9.59□□□□□ -0.87
NPC1-202ENST00000540608 HES1Q14469 280 aa9.59□□□□□ -0.87
NPC1-202ENST00000540608 TWIST1Q15672 202 aa9.59□□□□□ -0.87
NPC1-202ENST00000540608 ARPC1AQ92747 370 aa9.59□□□□□ -0.87
NPC1-202ENST00000540608 ODF3BA8MYP8 253 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 CACNG7P62955 275 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 FER1L6-AS1Q8NA97 138 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 NPFFR1Q9GZQ6 430 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 THYN1Q9P016 225 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 RABAC1Q9UI14 185 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 ANKHD1Q8IWZ3 2542 aaKnown RBP9.58□□□□□ -0.88
NPC1-202ENST00000540608 M0R1W7 72 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 PPBPP02775 128 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 IGLC6P0CF74 106 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 ZNF80P51504 273 aaPredicted RBP9.58□□□□□ -0.88
NPC1-202ENST00000540608 OCIAD2Q56VL3 154 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 ZNF575Q86XF7 245 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 SMAD5-AS1Q9Y6J3 95 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 HRNRQ86YZ3 2850 aaPredicted RBP9.58□□□□□ -0.88
NPC1-202ENST00000540608 SIVA1O15304 175 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 NPYP01303 97 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 PRTN3P24158 256 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 SRSF2Q01130 221 aaKnown RBP9.58□□□□□ -0.88
NPC1-202ENST00000540608 KLRD1Q13241 179 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 CDSNQ15517 529 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 RNF151Q2KHN1 245 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 IFI27L1Q96BM0 104 aa9.58□□□□□ -0.88
NPC1-202ENST00000540608 ABCA4P78363 2273 aa9.57□□□□□ -0.88
NPC1-202ENST00000540608 A0A1W2PRD5 423 aa9.57□□□□□ -0.88
NPC1-202ENST00000540608 A0A1W2PRF3 423 aa9.57□□□□□ -0.88
NPC1-202ENST00000540608 A0A1W2PRM7 423 aa9.57□□□□□ -0.88
NPC1-202ENST00000540608 IGHG4P01861 327 aa9.57□□□□□ -0.88
NPC1-202ENST00000540608 FXYD7P58549 80 aa9.57□□□□□ -0.88
NPC1-202ENST00000540608 VGLL1Q99990 258 aa9.57□□□□□ -0.88
NPC1-202ENST00000540608 ARHGAP32A7KAX9 2087 aa9.57□□□□□ -0.88
NPC1-202ENST00000540608 GAGE12BA1L429 117 aa9.57□□□□□ -0.88
NPC1-202ENST00000540608 SMKR1H3BMG3 65 aa9.57□□□□□ -0.88
NPC1-202ENST00000540608 SMAD7O15105 426 aaKnown RBP9.57□□□□□ -0.88
NPC1-202ENST00000540608 IGHV3-23P01764 117 aa9.57□□□□□ -0.88
NPC1-202ENST00000540608 CTSGP08311 255 aa9.57□□□□□ -0.88
NPC1-202ENST00000540608 NDPQ00604 133 aa9.57□□□□□ -0.88
NPC1-202ENST00000540608 OR9G4Q8NGQ1 327 aa9.57□□□□□ -0.88
NPC1-202ENST00000540608 H3BRM9 83 aa9.56□□□□□ -0.88
NPC1-202ENST00000540608 NDUFS7O75251 213 aa9.56□□□□□ -0.88
NPC1-202ENST00000540608 SCGB2A1O75556 95 aa9.56□□□□□ -0.88
NPC1-202ENST00000540608 Q8TAT8 98 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms