RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 ZNF329Q86UD4 541 aa7.51□□□□□ -1.21
CLIP1-214ENST00000540539 ITLN1Q8WWA0 313 aa7.51□□□□□ -1.21
CLIP1-214ENST00000540539 NABP1Q96AH0 204 aa7.51□□□□□ -1.21
CLIP1-214ENST00000540539 FLYWCH2Q96CP2 140 aaKnown RBP7.51□□□□□ -1.21
CLIP1-214ENST00000540539 TRAV2A0A0B4J234 112 aa7.51□□□□□ -1.21
CLIP1-214ENST00000540539 SCRG1O75711 98 aa7.51□□□□□ -1.21
CLIP1-214ENST00000540539 ORM1P02763 201 aa7.51□□□□□ -1.21
CLIP1-214ENST00000540539 CRYGBP07316 175 aa7.51□□□□□ -1.21
CLIP1-214ENST00000540539 SEC61GP60059 68 aa7.51□□□□□ -1.21
CLIP1-214ENST00000540539 LYRM7Q5U5X0 104 aa7.51□□□□□ -1.21
CLIP1-214ENST00000540539 SIGLEC15Q6ZMC9 328 aa7.51□□□□□ -1.21
CLIP1-214ENST00000540539 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-214ENST00000540539 MMABQ96EY8 250 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-214ENST00000540539 LINC00477Q96M19 166 aa7.51□□□□□ -1.21
CLIP1-214ENST00000540539 WDFY3Q8IZQ1 3526 aa7.5□□□□□ -1.21
CLIP1-214ENST00000540539 FAM236AA0A1B0GUQ0 79 aa7.5□□□□□ -1.21
CLIP1-214ENST00000540539 FAM236BA0A1B0GV22 79 aa7.5□□□□□ -1.21
CLIP1-214ENST00000540539 SLC25A20O43772 301 aa7.5□□□□□ -1.21
CLIP1-214ENST00000540539 NPYP01303 97 aa7.5□□□□□ -1.21
CLIP1-214ENST00000540539 HSPE1P61604 102 aaKnown RBP7.5□□□□□ -1.21
CLIP1-214ENST00000540539 MZT1Q08AG7 82 aa7.5□□□□□ -1.21
CLIP1-214ENST00000540539 EIF4EBP1Q13541 118 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-214ENST00000540539 MORN5Q5VZ52 161 aa7.5□□□□□ -1.21
CLIP1-214ENST00000540539 Q8N1Y9 231 aa7.5□□□□□ -1.21
CLIP1-214ENST00000540539 TIMD4Q96H15 378 aa7.5□□□□□ -1.21
CLIP1-214ENST00000540539 MLST8Q9BVC4 326 aa7.5□□□□□ -1.21
CLIP1-214ENST00000540539 DCHS1Q96JQ0 3298 aa7.5□□□□□ -1.21
CLIP1-214ENST00000540539 TRAV8-4A0A0B4J246 113 aa7.5□□□□□ -1.21
CLIP1-214ENST00000540539 EFNA2O43921 213 aa7.5□□□□□ -1.21
CLIP1-214ENST00000540539 C8orf88P0DMB2 117 aa7.5□□□□□ -1.21
CLIP1-214ENST00000540539 LINC00205P59089 165 aa7.5□□□□□ -1.21
CLIP1-214ENST00000540539 PDPNQ86YL7 162 aa7.5□□□□□ -1.21
CLIP1-214ENST00000540539 FGF23Q9GZV9 251 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-214ENST00000540539 A0A1W2PNU3 283 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-214ENST00000540539 D6R8Y8 96 aa7.49□□□□□ -1.21
CLIP1-214ENST00000540539 UQCRQO14949 82 aa7.49□□□□□ -1.21
CLIP1-214ENST00000540539 ARMS2P0C7Q2 107 aa7.49□□□□□ -1.21
CLIP1-214ENST00000540539 OR11H6Q8NGC7 330 aa7.49□□□□□ -1.21
CLIP1-214ENST00000540539 LINC00526Q96FQ7 95 aa7.49□□□□□ -1.21
CLIP1-214ENST00000540539 FAM167A-AS1Q96KT0 104 aa7.49□□□□□ -1.21
CLIP1-214ENST00000540539 A0A1B0GUT8 65 aa7.49□□□□□ -1.21
CLIP1-214ENST00000540539 LINC01619G3V211 115 aa7.49□□□□□ -1.21
CLIP1-214ENST00000540539 UBE2D1P51668 147 aa7.49□□□□□ -1.21
CLIP1-214ENST00000540539 EFNA4P52798 201 aa7.49□□□□□ -1.21
CLIP1-214ENST00000540539 TMEM155Q4W5P6 130 aa7.49□□□□□ -1.21
CLIP1-214ENST00000540539 Q5XG85 94 aa7.49□□□□□ -1.21
CLIP1-214ENST00000540539 C11orf53Q8IXP5 236 aa7.49□□□□□ -1.21
CLIP1-214ENST00000540539 MKXQ8IYA7 352 aa7.49□□□□□ -1.21
CLIP1-214ENST00000540539 NTN5Q8WTR8 489 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-214ENST00000540539 ZNF492Q9P255 531 aa7.49□□□□□ -1.21
CLIP1-214ENST00000540539 TRBV7-7A0A0K0K1E9 115 aa7.48□□□□□ -1.21
CLIP1-214ENST00000540539 A0A1W2PNR3 127 aa7.48□□□□□ -1.21
CLIP1-214ENST00000540539 DPM2O94777 84 aa7.48□□□□□ -1.21
CLIP1-214ENST00000540539 OXTP01178 125 aa7.48□□□□□ -1.21
CLIP1-214ENST00000540539 IGKV3-11P04433 115 aa7.48□□□□□ -1.21
CLIP1-214ENST00000540539 PYYP10082 97 aa7.48□□□□□ -1.21
CLIP1-214ENST00000540539 TEX36Q5VZQ5 186 aa7.48□□□□□ -1.21
CLIP1-214ENST00000540539 FAM53AQ6NSI3 398 aaPredicted RBP7.48□□□□□ -1.21
CLIP1-214ENST00000540539 SLC25A2Q9BXI2 301 aa7.48□□□□□ -1.21
CLIP1-214ENST00000540539 SDK2Q58EX2 2172 aa7.48□□□□□ -1.21
CLIP1-214ENST00000540539 TIMM23O14925 209 aa7.48□□□□□ -1.21
CLIP1-214ENST00000540539 CRYGDP07320 174 aa7.48□□□□□ -1.21
CLIP1-214ENST00000540539 CEMP1Q6PRD7 247 aaPredicted RBP7.48□□□□□ -1.21
CLIP1-214ENST00000540539 POM121L12Q8N7R1 296 aa7.48□□□□□ -1.21
CLIP1-214ENST00000540539 IGFBPL1Q8WX77 278 aa7.48□□□□□ -1.21
CLIP1-214ENST00000540539 CHCHD2Q9Y6H1 151 aaPredicted RBP7.48□□□□□ -1.21
CLIP1-214ENST00000540539 K7EM74 188 aa7.47□□□□□ -1.21
CLIP1-214ENST00000540539 CRIP2P52943 208 aaPredicted RBP7.47□□□□□ -1.21
CLIP1-214ENST00000540539 ZNF441Q8N8Z8 693 aa7.47□□□□□ -1.21
CLIP1-214ENST00000540539 AAMDCQ9H7C9 122 aa7.47□□□□□ -1.21
CLIP1-214ENST00000540539 IGKV1OR2-108A0A075B7D4 117 aa7.47□□□□□ -1.21
CLIP1-214ENST00000540539 C10orf128Q5T292 105 aa7.47□□□□□ -1.21
CLIP1-214ENST00000540539 SLC25A48Q6ZT89 311 aaKnown RBP7.47□□□□□ -1.21
CLIP1-214ENST00000540539 RNF138Q8WVD3 245 aa7.47□□□□□ -1.21
CLIP1-214ENST00000540539 TRGV11A0A075B6L2 103 aa7.46□□□□□ -1.21
CLIP1-214ENST00000540539 IGHV3OR15-7A0A075B7D8 119 aa7.46□□□□□ -1.21
CLIP1-214ENST00000540539 LINC00473A8K010 186 aa7.46□□□□□ -1.21
CLIP1-214ENST00000540539 PRSS1P07477 247 aa7.46□□□□□ -1.21
CLIP1-214ENST00000540539 PROK2Q9HC23 129 aa7.46□□□□□ -1.21
CLIP1-214ENST00000540539 TMEM160Q9NX00 188 aa7.46□□□□□ -1.21
CLIP1-214ENST00000540539 INTS1Q8N201 2190 aaKnown RBP7.46□□□□□ -1.22
CLIP1-214ENST00000540539 TRAV40A0A0B4J280 105 aa7.46□□□□□ -1.22
CLIP1-214ENST00000540539 TEX49A0A1B0GTD5 131 aa7.46□□□□□ -1.22
CLIP1-214ENST00000540539 TINCRA0A1B0GVN0 87 aa7.46□□□□□ -1.22
CLIP1-214ENST00000540539 DUTP33316 252 aaKnown RBP7.46□□□□□ -1.22
CLIP1-214ENST00000540539 RIGQ13278 110 aa7.46□□□□□ -1.22
CLIP1-214ENST00000540539 PMVKQ15126 192 aa7.46□□□□□ -1.22
CLIP1-214ENST00000540539 TWIST1Q15672 202 aa7.46□□□□□ -1.22
CLIP1-214ENST00000540539 GAGE2AQ6NT46 116 aa7.46□□□□□ -1.22
CLIP1-214ENST00000540539 WDR31Q8NA23 367 aa7.46□□□□□ -1.22
CLIP1-214ENST00000540539 ZNF837Q96EG3 531 aaPredicted RBP7.46□□□□□ -1.22
CLIP1-214ENST00000540539 FOXC2Q99958 501 aa7.46□□□□□ -1.22
CLIP1-214ENST00000540539 PRNDQ9UKY0 176 aa7.46□□□□□ -1.22
CLIP1-214ENST00000540539 AKAP13Q12802 2813 aa7.45□□□□□ -1.22
CLIP1-214ENST00000540539 ATP5LO75964 103 aa7.45□□□□□ -1.22
CLIP1-214ENST00000540539 CD3EP07766 207 aa7.45□□□□□ -1.22
CLIP1-214ENST00000540539 SPINK2P20155 84 aa7.45□□□□□ -1.22
CLIP1-214ENST00000540539 ZNF56Q15929 161 aa7.45□□□□□ -1.22
CLIP1-214ENST00000540539 C1orf43Q9BWL3 253 aa7.45□□□□□ -1.22
CLIP1-214ENST00000540539 U3KQK5 164 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms