RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 IGLV2-8P01709 118 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 LGALS9BQ3B8N2 356 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 LGALS9CQ6DKI2 356 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 SFTA2Q6UW10 78 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 Q6ZR03 302 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 GOLT1AQ6ZVE7 132 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 WDR86Q86TI4 376 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 ZNF329Q86UD4 541 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 RPEQ96AT9 228 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 SNCGO76070 127 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 PSMB2P49721 201 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 VCX2Q9H322 139 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 JPT1Q9UK76 154 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 EXPH5Q8NEV8 1989 aa6.98□□□□□ -1.29
DDB1-217ENST00000540166 A6NJY4 79 aa6.97□□□□□ -1.29
DDB1-217ENST00000540166 TWIST1Q15672 202 aa6.97□□□□□ -1.29
DDB1-217ENST00000540166 ZNRF1Q8ND25 227 aa6.97□□□□□ -1.29
DDB1-217ENST00000540166 OR1L8Q8NGR8 309 aa6.97□□□□□ -1.29
DDB1-217ENST00000540166 DPF1Q92782 380 aa6.97□□□□□ -1.29
DDB1-217ENST00000540166 TNCP24821 2201 aa6.97□□□□□ -1.29
DDB1-217ENST00000540166 A0A1B0GW15 77 aa6.97□□□□□ -1.29
DDB1-217ENST00000540166 PPIFP30405 207 aaKnown RBP6.97□□□□□ -1.29
DDB1-217ENST00000540166 ATP5IP56385 69 aaPredicted RBP6.97□□□□□ -1.29
DDB1-217ENST00000540166 SLC25A48Q6ZT89 311 aaKnown RBP6.97□□□□□ -1.29
DDB1-217ENST00000540166 C8orf86Q6ZUL3 223 aa6.97□□□□□ -1.29
DDB1-217ENST00000540166 Q8N7P7 452 aa6.97□□□□□ -1.29
DDB1-217ENST00000540166 TMEM158Q8WZ71 300 aa6.97□□□□□ -1.29
DDB1-217ENST00000540166 COQ2Q96H96 371 aa6.97□□□□□ -1.29
DDB1-217ENST00000540166 UFC1Q9Y3C8 167 aa6.97□□□□□ -1.29
DDB1-217ENST00000540166 ITPR3Q14573 2671 aa6.97□□□□□ -1.29
DDB1-217ENST00000540166 SETD2Q9BYW2 2564 aaPredicted RBP6.97□□□□□ -1.29
DDB1-217ENST00000540166 P0C879 139 aa6.97□□□□□ -1.29
DDB1-217ENST00000540166 FXYD2P54710 66 aa6.97□□□□□ -1.29
DDB1-217ENST00000540166 CCL8P80075 99 aa6.97□□□□□ -1.29
DDB1-217ENST00000540166 MLANAQ16655 118 aa6.97□□□□□ -1.29
DDB1-217ENST00000540166 FOXI2Q6ZQN5 318 aa6.97□□□□□ -1.29
DDB1-217ENST00000540166 INAFM1C9JVW0 142 aa6.96□□□□□ -1.29
DDB1-217ENST00000540166 D6R8Y8 96 aa6.96□□□□□ -1.29
DDB1-217ENST00000540166 LY6G6DO95868 133 aa6.96□□□□□ -1.29
DDB1-217ENST00000540166 THBDP07204 575 aa6.96□□□□□ -1.29
DDB1-217ENST00000540166 MYOD1P15172 320 aa6.96□□□□□ -1.29
DDB1-217ENST00000540166 CD69Q07108 199 aa6.96□□□□□ -1.29
DDB1-217ENST00000540166 GTSCR1Q86UQ5 136 aa6.96□□□□□ -1.29
DDB1-217ENST00000540166 MOGAT3Q86VF5 341 aa6.96□□□□□ -1.29
DDB1-217ENST00000540166 MYOZ3Q8TDC0 251 aa6.96□□□□□ -1.29
DDB1-217ENST00000540166 MAP1LC3AQ9H492 121 aa6.96□□□□□ -1.29
DDB1-217ENST00000540166 MGST3O14880 152 aa6.96□□□□□ -1.3
DDB1-217ENST00000540166 CECR9P0C854 216 aa6.96□□□□□ -1.3
DDB1-217ENST00000540166 LYZP61626 148 aa6.96□□□□□ -1.3
DDB1-217ENST00000540166 GAGE2BQ13066 116 aa6.96□□□□□ -1.3
DDB1-217ENST00000540166 GAGE2EQ4V326 116 aa6.96□□□□□ -1.3
DDB1-217ENST00000540166 CT83Q5H943 113 aa6.96□□□□□ -1.3
DDB1-217ENST00000540166 CACNG8Q8WXS5 425 aa6.96□□□□□ -1.3
DDB1-217ENST00000540166 SPANXB1Q9NS25 103 aaPredicted RBP6.96□□□□□ -1.3
DDB1-217ENST00000540166 GAGE2DQ9UEU5 116 aa6.96□□□□□ -1.3
DDB1-217ENST00000540166 IQCF6A8MYZ5 107 aa6.96□□□□□ -1.3
DDB1-217ENST00000540166 NPIPB6E9PJ23 425 aa6.96□□□□□ -1.3
DDB1-217ENST00000540166 ENSAO43768 121 aaKnown RBP6.96□□□□□ -1.3
DDB1-217ENST00000540166 NCR2O95944 276 aa6.96□□□□□ -1.3
DDB1-217ENST00000540166 TNFAIP6P98066 277 aaPredicted RBP6.96□□□□□ -1.3
DDB1-217ENST00000540166 PLGLAQ15195 96 aa6.96□□□□□ -1.3
DDB1-217ENST00000540166 SMIM20Q8N5G0 67 aa6.96□□□□□ -1.3
DDB1-217ENST00000540166 HARBI1Q96MB7 349 aa6.96□□□□□ -1.3
DDB1-217ENST00000540166 SRSF8Q9BRL6 282 aaKnown RBP6.96□□□□□ -1.3
DDB1-217ENST00000540166 GFRA4Q9GZZ7 299 aa6.96□□□□□ -1.3
DDB1-217ENST00000540166 ASH1LQ9NR48 2969 aaKnown RBP6.96□□□□□ -1.3
DDB1-217ENST00000540166 TMEM262E9PQX1 116 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 FNDC10F2Z333 226 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 ARMS2P0C7Q2 107 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 CIARTQ8N365 385 aaPredicted RBP6.95□□□□□ -1.3
DDB1-217ENST00000540166 RNF183Q96D59 192 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 Q9H3A6 140 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 TMEM189A5PLL7 270 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 IGKCP01834 107 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 ZNF502Q8TBZ5 544 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 MBD6Q96DN6 1003 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 FOXA2Q9Y261 457 aaPredicted RBP6.95□□□□□ -1.3
DDB1-217ENST00000540166 SLC25A15Q9Y619 301 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 A0A1B0GXF2 115 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 TCRBV4S1A1TA0A5B7 111 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 E7EQL1 145 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 HOXA3O43365 443 aaPredicted RBP6.95□□□□□ -1.3
DDB1-217ENST00000540166 COL8A2P25067 703 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 ZC2HC1BQ5TFG8 222 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 DLX4Q92988 240 aaPredicted RBP6.95□□□□□ -1.3
DDB1-217ENST00000540166 SPATA25Q9BR10 227 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 C20orf78Q9BR46 151 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 CALYQ9NYX4 217 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 OR11H12B2RN74 326 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 DPM2O94777 84 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 HERV-K104P63124 156 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 PRCDQ00LT1 54 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 KLF17Q5JT82 389 aaPredicted RBP6.95□□□□□ -1.3
DDB1-217ENST00000540166 FAM120AOSQ5T036 256 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 Q6AWC8 147 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 OR11H1Q8NG94 326 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 OR11H2Q8NH07 326 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 URB1-AS1Q96HZ7 61 aa6.95□□□□□ -1.3
DDB1-217ENST00000540166 COL27A1Q8IZC6 1860 aaPredicted RBP6.94□□□□□ -1.3
DDB1-217ENST00000540166 TRAV8-1A0A0A6YYK1 113 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms