RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 SMIM7Q9BQ49 75 aa12.17□□□□□ -0.46
TRAF3-204ENST00000539721 CLEC5AQ9NY25 188 aa12.17□□□□□ -0.46
TRAF3-204ENST00000539721 FBN1P35555 2871 aaKnown RBP12.16□□□□□ -0.46
TRAF3-204ENST00000539721 ZNF727A8MUV8 499 aa12.16□□□□□ -0.46
TRAF3-204ENST00000539721 PRB4P10163 310 aaPredicted RBP12.16□□□□□ -0.46
TRAF3-204ENST00000539721 CNN1P51911 297 aaKnown RBP12.16□□□□□ -0.46
TRAF3-204ENST00000539721 SHISA2Q6UWI4 295 aa12.16□□□□□ -0.46
TRAF3-204ENST00000539721 TMEM61Q8N0U2 210 aa12.16□□□□□ -0.46
TRAF3-204ENST00000539721 DCANP1Q8TF63 244 aa12.16□□□□□ -0.46
TRAF3-204ENST00000539721 ZNF705FA8MVS1 300 aaPredicted RBP12.15□□□□□ -0.46
TRAF3-204ENST00000539721 DIRC3C9JPN6 131 aa12.15□□□□□ -0.46
TRAF3-204ENST00000539721 ISLRO14498 428 aa12.15□□□□□ -0.46
TRAF3-204ENST00000539721 ID1P41134 155 aa12.15□□□□□ -0.46
TRAF3-204ENST00000539721 PSG3Q16557 428 aa12.15□□□□□ -0.46
TRAF3-204ENST00000539721 CD300EQ496F6 205 aaPredicted RBP12.15□□□□□ -0.46
TRAF3-204ENST00000539721 FAM74A3Q4VXF1 159 aa12.15□□□□□ -0.46
TRAF3-204ENST00000539721 C10orf91Q5T1B1 145 aa12.15□□□□□ -0.46
TRAF3-204ENST00000539721 GOLT1AQ6ZVE7 132 aa12.15□□□□□ -0.46
TRAF3-204ENST00000539721 CARHSP1Q9Y2V2 147 aaKnown RBP12.15□□□□□ -0.46
TRAF3-204ENST00000539721 TSPAN4O14817 238 aa12.15□□□□□ -0.46
TRAF3-204ENST00000539721 APOC3P02656 99 aa12.15□□□□□ -0.46
TRAF3-204ENST00000539721 RPL35P42766 123 aaKnown RBP12.15□□□□□ -0.46
TRAF3-204ENST00000539721 LCN12Q6JVE5 192 aa12.15□□□□□ -0.46
TRAF3-204ENST00000539721 ARL6IP6Q8N6S5 226 aa12.15□□□□□ -0.46
TRAF3-204ENST00000539721 MRPL53Q96EL3 112 aaKnown RBP12.15□□□□□ -0.46
TRAF3-204ENST00000539721 C20orf173Q96LM9 149 aa12.15□□□□□ -0.46
TRAF3-204ENST00000539721 LINC00479Q96M42 142 aa12.15□□□□□ -0.46
TRAF3-204ENST00000539721 K7EQG2 157 aa12.14□□□□□ -0.47
TRAF3-204ENST00000539721 K7EQM0 130 aa12.14□□□□□ -0.47
TRAF3-204ENST00000539721 UBE2G1P62253 170 aa12.14□□□□□ -0.47
TRAF3-204ENST00000539721 NIPSNAP3BQ9BS92 247 aa12.14□□□□□ -0.47
TRAF3-204ENST00000539721 TRAV34A0A0B4J273 112 aa12.13□□□□□ -0.47
TRAF3-204ENST00000539721 TRAV25A0A0B4J276 109 aa12.13□□□□□ -0.47
TRAF3-204ENST00000539721 ZNF738Q8NE65 137 aa12.13□□□□□ -0.47
TRAF3-204ENST00000539721 TRAV2A0A0B4J234 112 aa12.13□□□□□ -0.47
TRAF3-204ENST00000539721 SERTM2A0A1B0GWG4 89 aa12.13□□□□□ -0.47
TRAF3-204ENST00000539721 TMEM183BQ1AE95 376 aa12.13□□□□□ -0.47
TRAF3-204ENST00000539721 FMC1Q96HJ9 113 aa12.13□□□□□ -0.47
TRAF3-204ENST00000539721 SGK494Q96LW2 274 aa12.13□□□□□ -0.47
TRAF3-204ENST00000539721 IGKV2-40A0A087WW87 121 aaPredicted RBP12.12□□□□□ -0.47
TRAF3-204ENST00000539721 PRAC2D3DTV9 90 aa12.12□□□□□ -0.47
TRAF3-204ENST00000539721 IGKV2D-40P01614 121 aaPredicted RBP12.12□□□□□ -0.47
TRAF3-204ENST00000539721 S100A9P06702 114 aaKnown RBP12.12□□□□□ -0.47
TRAF3-204ENST00000539721 ZNF688P0C7X2 276 aa12.12□□□□□ -0.47
TRAF3-204ENST00000539721 TAS2R60P59551 318 aa12.12□□□□□ -0.47
TRAF3-204ENST00000539721 SNRPD3P62318 126 aaKnown RBP12.12□□□□□ -0.47
TRAF3-204ENST00000539721 GUCA2BQ16661 112 aa12.12□□□□□ -0.47
TRAF3-204ENST00000539721 TMEM241Q24JQ0 296 aa12.12□□□□□ -0.47
TRAF3-204ENST00000539721 FAM24BQ8N5W8 94 aa12.12□□□□□ -0.47
TRAF3-204ENST00000539721 TMEM75Q8N9X5 138 aa12.12□□□□□ -0.47
TRAF3-204ENST00000539721 SPAG8Q99932 426 aaPredicted RBP12.12□□□□□ -0.47
TRAF3-204ENST00000539721 NAT8Q9UHE5 227 aa12.12□□□□□ -0.47
TRAF3-204ENST00000539721 TRAV8-1A0A0A6YYK1 113 aa12.11□□□□□ -0.47
TRAF3-204ENST00000539721 IZUMO1RA6ND01 250 aa12.11□□□□□ -0.47
TRAF3-204ENST00000539721 IGLV1-51P01701 117 aa12.11□□□□□ -0.47
TRAF3-204ENST00000539721 CD33P20138 364 aa12.11□□□□□ -0.47
TRAF3-204ENST00000539721 GNG4P50150 75 aa12.11□□□□□ -0.47
TRAF3-204ENST00000539721 CENPWQ5EE01 88 aa12.11□□□□□ -0.47
TRAF3-204ENST00000539721 LURAP1LQ8IV03 231 aa12.11□□□□□ -0.47
TRAF3-204ENST00000539721 KLF12Q9Y4X4 402 aa12.11□□□□□ -0.47
TRAF3-204ENST00000539721 TRBV20OR9-2A0A075B6H5 130 aa12.1□□□□□ -0.47
TRAF3-204ENST00000539721 OR4C46A6NHA9 309 aa12.1□□□□□ -0.47
TRAF3-204ENST00000539721 C9JCJ5 164 aa12.1□□□□□ -0.47
TRAF3-204ENST00000539721 PSMG4Q5JS54 123 aa12.1□□□□□ -0.47
TRAF3-204ENST00000539721 SVBPQ8N300 66 aa12.1□□□□□ -0.47
TRAF3-204ENST00000539721 OR2K2Q8NGT1 345 aa12.1□□□□□ -0.47
TRAF3-204ENST00000539721 SPATA3Q8NHX4 192 aa12.1□□□□□ -0.47
TRAF3-204ENST00000539721 TVP23CQ96ET8 276 aa12.1□□□□□ -0.47
TRAF3-204ENST00000539721 IGF2BP2-AS1Q96M15 143 aa12.1□□□□□ -0.47
TRAF3-204ENST00000539721 SDF2L1Q9HCN8 221 aa12.1□□□□□ -0.47
TRAF3-204ENST00000539721 PGPEP1LA6NFU8 196 aa12.1□□□□□ -0.47
TRAF3-204ENST00000539721 FLI1Q01543 452 aaPredicted RBP12.1□□□□□ -0.47
TRAF3-204ENST00000539721 C9orf66Q5T8R8 295 aa12.1□□□□□ -0.47
TRAF3-204ENST00000539721 PRNTQ86SH4 94 aa12.1□□□□□ -0.47
TRAF3-204ENST00000539721 RBAKDNA6NC62 111 aa12.09□□□□□ -0.47
TRAF3-204ENST00000539721 M0R036 132 aa12.09□□□□□ -0.47
TRAF3-204ENST00000539721 IGLV2-11P01706 119 aa12.09□□□□□ -0.47
TRAF3-204ENST00000539721 Q86TA4 180 aa12.09□□□□□ -0.47
TRAF3-204ENST00000539721 VGLL1Q99990 258 aa12.09□□□□□ -0.47
TRAF3-204ENST00000539721 PSG8Q9UQ74 426 aa12.09□□□□□ -0.47
TRAF3-204ENST00000539721 DEFB1P60022 68 aa12.08□□□□□ -0.48
TRAF3-204ENST00000539721 RPL23P62829 140 aaKnown RBP12.08□□□□□ -0.48
TRAF3-204ENST00000539721 ERCC8Q13216 396 aa12.08□□□□□ -0.48
TRAF3-204ENST00000539721 ADIRFQ15847 76 aa12.08□□□□□ -0.48
TRAF3-204ENST00000539721 BAGE2Q86Y30 109 aa12.08□□□□□ -0.48
TRAF3-204ENST00000539721 TRBV6-1A0A0K0K1D8 114 aa12.07□□□□□ -0.48
TRAF3-204ENST00000539721 FBLL1A6NHQ2 334 aaKnown RBP12.07□□□□□ -0.48
TRAF3-204ENST00000539721 SNAPINO95295 136 aa12.07□□□□□ -0.48
TRAF3-204ENST00000539721 INSL3P51460 131 aa12.07□□□□□ -0.48
TRAF3-204ENST00000539721 PNRC1Q12796 327 aaPredicted RBP12.07□□□□□ -0.48
TRAF3-204ENST00000539721 NHLRC2Q8NBF2 726 aa12.07□□□□□ -0.48
TRAF3-204ENST00000539721 OR10J6PQ8NGY7 276 aa12.07□□□□□ -0.48
TRAF3-204ENST00000539721 OCC1Q8TAD7 63 aa12.07□□□□□ -0.48
TRAF3-204ENST00000539721 MCRIP2Q9BUT9 160 aaKnown RBP12.07□□□□□ -0.48
TRAF3-204ENST00000539721 AURKAIP1Q9NWT8 199 aaPredicted RBP12.07□□□□□ -0.48
TRAF3-204ENST00000539721 ZNF256Q9Y2P7 627 aaPredicted RBP12.07□□□□□ -0.48
TRAF3-204ENST00000539721 LY96Q9Y6Y9 160 aa12.07□□□□□ -0.48
TRAF3-204ENST00000539721 F6UB75 175 aa12.07□□□□□ -0.48
TRAF3-204ENST00000539721 LTAP01374 205 aa12.07□□□□□ -0.48
TRAF3-204ENST00000539721 ZNF705DP0CH99 300 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms