RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ARPC1AQ92747 370 aa10.37□□□□□ -0.75
UBE3B-209ENST00000539584 NXT2Q9NPJ8 142 aaKnown RBP10.37□□□□□ -0.75
UBE3B-209ENST00000539584 TRAV8-6A0A0B4J262 113 aa10.36□□□□□ -0.75
UBE3B-209ENST00000539584 LOC389332A0A1B0GUA5 103 aa10.36□□□□□ -0.75
UBE3B-209ENST00000539584 ODF3BA8MYP8 253 aa10.36□□□□□ -0.75
UBE3B-209ENST00000539584 PRTN3P24158 256 aa10.36□□□□□ -0.75
UBE3B-209ENST00000539584 TWIST1Q15672 202 aa10.36□□□□□ -0.75
UBE3B-209ENST00000539584 ZNF672Q499Z4 452 aaPredicted RBP10.36□□□□□ -0.75
UBE3B-209ENST00000539584 C1orf122Q6ZSJ8 110 aa10.36□□□□□ -0.75
UBE3B-209ENST00000539584 TIMD4Q96H15 378 aa10.36□□□□□ -0.75
UBE3B-209ENST00000539584 MAP1LC3AQ9H492 121 aa10.36□□□□□ -0.75
UBE3B-209ENST00000539584 CUL9Q8IWT3 2517 aa10.36□□□□□ -0.75
UBE3B-209ENST00000539584 RBAKDNA6NC62 111 aa10.36□□□□□ -0.75
UBE3B-209ENST00000539584 EGR2P11161 476 aaPredicted RBP10.36□□□□□ -0.75
UBE3B-209ENST00000539584 DLX1P56177 255 aa10.36□□□□□ -0.75
UBE3B-209ENST00000539584 CACNG7P62955 275 aa10.36□□□□□ -0.75
UBE3B-209ENST00000539584 SMPXQ9UHP9 88 aa10.36□□□□□ -0.75
UBE3B-209ENST00000539584 DSPP15924 2871 aaKnown RBP10.36□□□□□ -0.75
UBE3B-209ENST00000539584 SPENQ96T58 3664 aaKnown RBP10.36□□□□□ -0.75
UBE3B-209ENST00000539584 FABP5P3A8MUU1 101 aa10.35□□□□□ -0.75
UBE3B-209ENST00000539584 F8W735 103 aaPredicted RBP10.35□□□□□ -0.75
UBE3B-209ENST00000539584 FAM106CPP0CH98 169 aa10.35□□□□□ -0.75
UBE3B-209ENST00000539584 LOXL1Q08397 574 aaPredicted RBP10.35□□□□□ -0.75
UBE3B-209ENST00000539584 FBXL19-AS1Q494R0 122 aa10.35□□□□□ -0.75
UBE3B-209ENST00000539584 FAM106AQ4KMX7 169 aa10.35□□□□□ -0.75
UBE3B-209ENST00000539584 UFSP1Q6NVU6 142 aa10.35□□□□□ -0.75
UBE3B-209ENST00000539584 SH3BGRL2Q9UJC5 107 aa10.35□□□□□ -0.75
UBE3B-209ENST00000539584 LOC400499M0QZD8 3231 aa10.35□□□□□ -0.75
UBE3B-209ENST00000539584 EBI3Q14213 229 aa10.34□□□□□ -0.75
UBE3B-209ENST00000539584 ADAMTSL5Q6ZMM2 481 aa10.34□□□□□ -0.75
UBE3B-209ENST00000539584 VPS25Q9BRG1 176 aa10.34□□□□□ -0.75
UBE3B-209ENST00000539584 HIGD1BQ9P298 99 aa10.34□□□□□ -0.75
UBE3B-209ENST00000539584 NDUFS7O75251 213 aa10.34□□□□□ -0.75
UBE3B-209ENST00000539584 FCER1GP30273 86 aa10.34□□□□□ -0.75
UBE3B-209ENST00000539584 RNF151Q2KHN1 245 aa10.34□□□□□ -0.75
UBE3B-209ENST00000539584 KLK9Q2XQG4 91 aa10.34□□□□□ -0.75
UBE3B-209ENST00000539584 MINOS1Q5TGZ0 78 aa10.34□□□□□ -0.75
UBE3B-209ENST00000539584 OR5A1Q8NGJ0 315 aa10.34□□□□□ -0.75
UBE3B-209ENST00000539584 KLK9Q9UKQ9 250 aa10.34□□□□□ -0.75
UBE3B-209ENST00000539584 MINOS1-NBL1R4GNA1 71 aa10.34□□□□□ -0.75
UBE3B-209ENST00000539584 IGKV2-40A0A087WW87 121 aaPredicted RBP10.33□□□□□ -0.76
UBE3B-209ENST00000539584 TMSB15BA0A087X1C1 80 aa10.33□□□□□ -0.76
UBE3B-209ENST00000539584 NPYP01303 97 aa10.33□□□□□ -0.76
UBE3B-209ENST00000539584 IGKV2D-40P01614 121 aaPredicted RBP10.33□□□□□ -0.76
UBE3B-209ENST00000539584 HLA-DRB4P13762 266 aa10.33□□□□□ -0.76
UBE3B-209ENST00000539584 HES1Q14469 280 aa10.33□□□□□ -0.76
UBE3B-209ENST00000539584 HILPDAQ9Y5L2 63 aa10.33□□□□□ -0.76
UBE3B-209ENST00000539584 HLA-DRB4X5D2U9 266 aa10.33□□□□□ -0.76
UBE3B-209ENST00000539584 OTOGLQ3ZCN5 2332 aa10.33□□□□□ -0.76
UBE3B-209ENST00000539584 LYNX1G3V0Z9 82 aa10.33□□□□□ -0.76
UBE3B-209ENST00000539584 CTSGP08311 255 aa10.33□□□□□ -0.76
UBE3B-209ENST00000539584 LYNX1P0DP58 116 aa10.33□□□□□ -0.76
UBE3B-209ENST00000539584 KLF17Q5JT82 389 aaPredicted RBP10.33□□□□□ -0.76
UBE3B-209ENST00000539584 Q8N6K4 173 aa10.33□□□□□ -0.76
UBE3B-209ENST00000539584 ASCL2Q99929 193 aa10.33□□□□□ -0.76
UBE3B-209ENST00000539584 ZMAT4Q9H898 229 aa10.33□□□□□ -0.76
UBE3B-209ENST00000539584 K7EP34 96 aa10.32□□□□□ -0.76
UBE3B-209ENST00000539584 ATP5LO75964 103 aa10.32□□□□□ -0.76
UBE3B-209ENST00000539584 PRB3Q04118 309 aaPredicted RBP10.32□□□□□ -0.76
UBE3B-209ENST00000539584 SLC50A1Q9BRV3 221 aa10.32□□□□□ -0.76
UBE3B-209ENST00000539584 A0A0G2JLM5 398 aa10.31□□□□□ -0.76
UBE3B-209ENST00000539584 PRSS47A8MTI9 375 aa10.31□□□□□ -0.76
UBE3B-209ENST00000539584 SNAI2O43623 268 aa10.31□□□□□ -0.76
UBE3B-209ENST00000539584 KIR3DS1Q14943 382 aa10.31□□□□□ -0.76
UBE3B-209ENST00000539584 ERASQ7Z444 233 aa10.31□□□□□ -0.76
UBE3B-209ENST00000539584 OR2K2Q8NGT1 345 aa10.31□□□□□ -0.76
UBE3B-209ENST00000539584 RNF185Q96GF1 192 aa10.31□□□□□ -0.76
UBE3B-209ENST00000539584 HIF1ANQ9NWT6 349 aa10.31□□□□□ -0.76
UBE3B-209ENST00000539584 EVI2AP22794 236 aa10.31□□□□□ -0.76
UBE3B-209ENST00000539584 SMAD5-AS1Q9Y6J3 95 aa10.31□□□□□ -0.76
UBE3B-209ENST00000539584 ZGRF1Q86YA3 2104 aa10.3□□□□□ -0.76
UBE3B-209ENST00000539584 IGHG4P01861 327 aa10.3□□□□□ -0.76
UBE3B-209ENST00000539584 ORM1P02763 201 aa10.3□□□□□ -0.76
UBE3B-209ENST00000539584 ZNF80P51504 273 aaPredicted RBP10.3□□□□□ -0.76
UBE3B-209ENST00000539584 BCL6BQ8N143 479 aaPredicted RBP10.3□□□□□ -0.76
UBE3B-209ENST00000539584 MRPL53Q96EL3 112 aaKnown RBP10.3□□□□□ -0.76
UBE3B-209ENST00000539584 VGLL1Q99990 258 aa10.3□□□□□ -0.76
UBE3B-209ENST00000539584 NCBP2LA6PVI3 153 aaKnown RBP10.29□□□□□ -0.76
UBE3B-209ENST00000539584 TNFRSF6BO95407 300 aa10.29□□□□□ -0.76
UBE3B-209ENST00000539584 SRSF1Q07955 248 aaKnown RBP eCLIP10.29□□□□□ -0.76
UBE3B-209ENST00000539584 ZNF575Q86XF7 245 aa10.29□□□□□ -0.76
UBE3B-209ENST00000539584 PSMG3-AS1Q96PY0 264 aa10.29□□□□□ -0.76
UBE3B-209ENST00000539584 H3BUT2 72 aa10.29□□□□□ -0.76
UBE3B-209ENST00000539584 NMUP48645 174 aa10.29□□□□□ -0.76
UBE3B-209ENST00000539584 ODF1Q14990 250 aa10.29□□□□□ -0.76
UBE3B-209ENST00000539584 PRSS57Q6UWY2 283 aa10.29□□□□□ -0.76
UBE3B-209ENST00000539584 Q8N8P6 123 aa10.29□□□□□ -0.76
UBE3B-209ENST00000539584 BDP1A6H8Y1 2624 aa10.29□□□□□ -0.76
UBE3B-209ENST00000539584 A0A1W2PPM0 123 aa10.28□□□□□ -0.76
UBE3B-209ENST00000539584 GOSR1O95249 250 aa10.28□□□□□ -0.76
UBE3B-209ENST00000539584 SMIM13P0DJ93 91 aa10.28□□□□□ -0.76
UBE3B-209ENST00000539584 SMIM17P0DL12 118 aa10.28□□□□□ -0.76
UBE3B-209ENST00000539584 LEPP41159 167 aa10.28□□□□□ -0.76
UBE3B-209ENST00000539584 UQCRFS1P47985 274 aa10.28□□□□□ -0.76
UBE3B-209ENST00000539584 NDPQ00604 133 aa10.28□□□□□ -0.76
UBE3B-209ENST00000539584 VMO1Q7Z5L0 202 aa10.28□□□□□ -0.76
UBE3B-209ENST00000539584 FAM110DQ8TAY7 271 aaPredicted RBP10.28□□□□□ -0.76
UBE3B-209ENST00000539584 CSTL1Q9H114 145 aa10.28□□□□□ -0.76
UBE3B-209ENST00000539584 HHLA3Q9XRX5 114 aa10.28□□□□□ -0.76
UBE3B-209ENST00000539584 S4R3C0 116 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms