RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 CFHR4Q92496 578 aa7.57□□□□□ -1.2
CDH13-204ENST00000539548 NPFFR1Q9GZQ6 430 aa7.57□□□□□ -1.2
CDH13-204ENST00000539548 DPM3Q9P2X0 92 aa7.57□□□□□ -1.2
CDH13-204ENST00000539548 CNOT1A5YKK6 2376 aaKnown RBP7.57□□□□□ -1.2
CDH13-204ENST00000539548 IGLV11-55A0A075B6I3 123 aa7.57□□□□□ -1.2
CDH13-204ENST00000539548 SIVA1O15304 175 aa7.57□□□□□ -1.2
CDH13-204ENST00000539548 HBDP02042 147 aa7.57□□□□□ -1.2
CDH13-204ENST00000539548 PRB4P10163 310 aaPredicted RBP7.57□□□□□ -1.2
CDH13-204ENST00000539548 KLF17Q5JT82 389 aaPredicted RBP7.57□□□□□ -1.2
CDH13-204ENST00000539548 Q8NA96 180 aa7.57□□□□□ -1.2
CDH13-204ENST00000539548 OR11H6Q8NGC7 330 aa7.57□□□□□ -1.2
CDH13-204ENST00000539548 ABHD17AQ96GS6 310 aa7.57□□□□□ -1.2
CDH13-204ENST00000539548 FANCD2OSQ96PS1 177 aa7.57□□□□□ -1.2
CDH13-204ENST00000539548 TMSB15BA0A087X1C1 80 aa7.56□□□□□ -1.2
CDH13-204ENST00000539548 NPIPB5A8MRT5 1133 aa7.56□□□□□ -1.2
CDH13-204ENST00000539548 SNAI2O43623 268 aa7.56□□□□□ -1.2
CDH13-204ENST00000539548 RNF151Q2KHN1 245 aa7.56□□□□□ -1.2
CDH13-204ENST00000539548 PRR25Q96S07 402 aa7.56□□□□□ -1.2
CDH13-204ENST00000539548 ONECUT1Q9UBC0 465 aa7.56□□□□□ -1.2
CDH13-204ENST00000539548 USP24Q9UPU5 2620 aa7.56□□□□□ -1.2
CDH13-204ENST00000539548 ATRXP46100 2492 aa7.56□□□□□ -1.2
CDH13-204ENST00000539548 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.56□□□□□ -1.2
CDH13-204ENST00000539548 H3BRM9 83 aa7.56□□□□□ -1.2
CDH13-204ENST00000539548 RPL7P18124 248 aaKnown RBP7.56□□□□□ -1.2
CDH13-204ENST00000539548 CEACAM3P40198 252 aa7.56□□□□□ -1.2
CDH13-204ENST00000539548 SRSF2Q01130 221 aaKnown RBP7.56□□□□□ -1.2
CDH13-204ENST00000539548 C5orf64Q2M2E5 130 aa7.56□□□□□ -1.2
CDH13-204ENST00000539548 OR9G4Q8NGQ1 327 aa7.56□□□□□ -1.2
CDH13-204ENST00000539548 RABAC1Q9UI14 185 aa7.56□□□□□ -1.2
CDH13-204ENST00000539548 S4R3C0 116 aa7.56□□□□□ -1.2
CDH13-204ENST00000539548 GAGE12BA1L429 117 aa7.55□□□□□ -1.2
CDH13-204ENST00000539548 A6NDN8 102 aa7.55□□□□□ -1.2
CDH13-204ENST00000539548 F8W735 103 aaPredicted RBP7.55□□□□□ -1.2
CDH13-204ENST00000539548 SMAD7O15105 426 aaKnown RBP7.55□□□□□ -1.2
CDH13-204ENST00000539548 IGLC6P0CF74 106 aa7.55□□□□□ -1.2
CDH13-204ENST00000539548 EGR2P11161 476 aaPredicted RBP7.55□□□□□ -1.2
CDH13-204ENST00000539548 CKS2P33552 79 aa7.55□□□□□ -1.2
CDH13-204ENST00000539548 BMI1P35226 326 aa7.55□□□□□ -1.2
CDH13-204ENST00000539548 TTC9CQ8N5M4 171 aa7.55□□□□□ -1.2
CDH13-204ENST00000539548 IFI27L1Q96BM0 104 aa7.55□□□□□ -1.2
CDH13-204ENST00000539548 HILPDAQ9Y5L2 63 aa7.55□□□□□ -1.2
CDH13-204ENST00000539548 PCNX1Q96RV3 2341 aa7.55□□□□□ -1.2
CDH13-204ENST00000539548 ANKRD11Q6UB99 2663 aaPredicted RBP7.55□□□□□ -1.2
CDH13-204ENST00000539548 IGKV2-40A0A087WW87 121 aaPredicted RBP7.54□□□□□ -1.2
CDH13-204ENST00000539548 A1L4Q6 167 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 C9orf118A6NHY6 69 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 IGKV2D-40P01614 121 aaPredicted RBP7.54□□□□□ -1.2
CDH13-204ENST00000539548 CACNG7P62955 275 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 HSD52Q0P140 79 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 ZNF562Q6V9R5 426 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 FER1L6-AS1Q8NA97 138 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 OR4X2Q8NGF9 303 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 IGFBPL1Q8WX77 278 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 FAM208BQ5VWN6 2430 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 GAGE10A6NGK3 116 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 LINC01546A6NGU7 62 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 NDUFS7O75251 213 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 NPYP01303 97 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 COTL1Q14019 142 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 TWIST1Q15672 202 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 ZNF672Q499Z4 452 aaPredicted RBP7.54□□□□□ -1.2
CDH13-204ENST00000539548 UFSP1Q6NVU6 142 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 ZNF575Q86XF7 245 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 PIFOQ8TCI5 191 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 C21orf62Q9NYP8 219 aa7.54□□□□□ -1.2
CDH13-204ENST00000539548 ODF3BA8MYP8 253 aa7.53□□□□□ -1.2
CDH13-204ENST00000539548 UQCRFS1P47985 274 aa7.53□□□□□ -1.2
CDH13-204ENST00000539548 ZNF80P51504 273 aaPredicted RBP7.53□□□□□ -1.2
CDH13-204ENST00000539548 PSMG4Q5JS54 123 aa7.53□□□□□ -1.2
CDH13-204ENST00000539548 ADAMTSL5Q6ZMM2 481 aa7.53□□□□□ -1.2
CDH13-204ENST00000539548 ARPC1AQ92747 370 aa7.53□□□□□ -1.2
CDH13-204ENST00000539548 PSMG3-AS1Q96PY0 264 aa7.53□□□□□ -1.2
CDH13-204ENST00000539548 THYN1Q9P016 225 aa7.53□□□□□ -1.2
CDH13-204ENST00000539548 SMAD5-AS1Q9Y6J3 95 aa7.53□□□□□ -1.2
CDH13-204ENST00000539548 K7ERU9 68 aa7.53□□□□□ -1.2
CDH13-204ENST00000539548 M0R1W7 72 aa7.53□□□□□ -1.2
CDH13-204ENST00000539548 IGHG4P01861 327 aa7.53□□□□□ -1.2
CDH13-204ENST00000539548 FXYD7P58549 80 aa7.53□□□□□ -1.2
CDH13-204ENST00000539548 GTF2H5Q6ZYL4 71 aa7.53□□□□□ -1.2
CDH13-204ENST00000539548 AP1S3Q96PC3 154 aa7.53□□□□□ -1.2
CDH13-204ENST00000539548 VGLL1Q99990 258 aa7.53□□□□□ -1.2
CDH13-204ENST00000539548 VPS25Q9BRG1 176 aa7.53□□□□□ -1.2
CDH13-204ENST00000539548 CNFNQ9BYD5 112 aa7.53□□□□□ -1.2
CDH13-204ENST00000539548 POLEQ07864 2286 aa7.52□□□□□ -1.21
CDH13-204ENST00000539548 SMKR1H3BMG3 65 aa7.52□□□□□ -1.21
CDH13-204ENST00000539548 CTSGP08311 255 aa7.52□□□□□ -1.21
CDH13-204ENST00000539548 PRTN3P24158 256 aa7.52□□□□□ -1.21
CDH13-204ENST00000539548 HES1Q14469 280 aa7.52□□□□□ -1.21
CDH13-204ENST00000539548 RNF185Q96GF1 192 aa7.52□□□□□ -1.21
CDH13-204ENST00000539548 VKORC1Q9BQB6 163 aa7.52□□□□□ -1.21
CDH13-204ENST00000539548 MAP1LC3AQ9H492 121 aa7.52□□□□□ -1.21
CDH13-204ENST00000539548 BOD1L1Q8NFC6 3051 aa7.52□□□□□ -1.21
CDH13-204ENST00000539548 FABP5P3A8MUU1 101 aa7.52□□□□□ -1.21
CDH13-204ENST00000539548 SCGB2A1O75556 95 aa7.52□□□□□ -1.21
CDH13-204ENST00000539548 S100A7P31151 101 aa7.52□□□□□ -1.21
CDH13-204ENST00000539548 LINC01560Q8TB33 94 aa7.52□□□□□ -1.21
CDH13-204ENST00000539548 ASPMQ8IZT6 3477 aa7.51□□□□□ -1.21
CDH13-204ENST00000539548 A0A1W2PRD5 423 aa7.51□□□□□ -1.21
CDH13-204ENST00000539548 A0A1W2PRF3 423 aa7.51□□□□□ -1.21
CDH13-204ENST00000539548 A0A1W2PRM7 423 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms